BDGP Sequence Production Resources |
Search the DGRC for GH07940
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 79 |
Well: | 40 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11018-RA |
Protein status: | GH07940.pep: gold |
Preliminary Size: | 1305 |
Sequenced Size: | 1216 |
Gene | Date | Evidence |
---|---|---|
CG11018 | 2001-01-01 | Release 2 assignment |
CG11018 | 2002-03-19 | Blastp of sequenced clone |
CG11018 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11018 | 2008-04-29 | Release 5.5 accounting |
CG11018 | 2008-08-15 | Release 5.9 accounting |
CG11018 | 2008-12-18 | 5.12 accounting |
1216 bp (1216 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094686
> GH07940.complete TTGAATCACACTTTAAAGACAAGGGATATACCCCTAAAATATCACATAGA ACACTATGCATTGGTATGCAATCCTCCAAGGATTCCTCCTGGGAATATCA TCGATAATCATTTTATGGGTACAAGGAGTCGTTGGCTTGCCATTGGCTAC AACCGATCTGGAGTCACTTCCAATCGTCTTGGCAGAGGATGTTCCGGTGG AGAGAGCTCCAAGGCAAGTAAAACCAGATCCGTCGACGTTCGATATTTTC AAGGTGGATCAAAGCTCCAATAACCAAATGCAGCAGAAATCCGACGGCTT CAGAGTGTTCGCAAAGAAACTACAGGATGATTATCACCGTAGAGCTGGCT ACAATGAAACTAATCCGCCACCAATTACTGTGACCCGAGGAAGCACTACT GCTCCTAAGAAAATCCATAAAAGTGGCATTCGACTATTTGCTTCTCCACA AGATCCACCTCCGCCTGAAGCTGCGGCGCCAGCTGATGGAGCTCCAGCGG CGGCAGGAGCGGCTGAAGGAGGTGCCGCCGGAGGAAAAGGAACTGAACCA CCCAAAGAGCTGACCGTCAGTATTCAACAATTCGTTACAAACCAATATGG GGAGAAGGAATACAATGCTTGGGGCGTCACTTTTGGTAGACATTTCTTCG ACACCCGTTTCGCCGTAGCTAGGCATGAAATACCTCGAATAACTGTGGAT CCGAAACCGGTCCGTAATTACTATCCAAAAATGGACAATCTGACCACCGT CTGCTTGAACAGATCGACCATCTACAATGAGATTAAAGTCGAAAAGTGGC TGATGCGCCACGTCTACAGCATAAAGAAGAAAGTGCGCCCCTTCTTTTTC TCCCTTCGCCAGCAGCTCTACGAGAAAGGGGATTCGGAGCAGTGCCACAA TGAGTCCTACACTGACTGGTTGGAGTACCAGGAGTGCGCCATTAGACGCA ACCAGCGCATGGAGTACTTTATCCCCAAGTATCCGCTACACCAACTTGCC ATTAACTAAAGGCAACCACATCTTGGACTCACTCAACCTGTTTAAATTTC AGTTAGACATTGATCATGATCAGTCTTCGTACGAGAAAATTGATGGGACA AGGAATGATTATCATATTTGTGATTCCTCTTCATTTAAATGTAAATTCAA AAATTTTCTTGATTTATGCTTGCAGAAATAAATATATTTTATTTTCTTAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11018-RA | 1373 | CG11018-RA | 78..1277 | 1..1200 | 6000 | 100 | Plus |
CG11018.b | 1234 | CG11018.b | 162..1234 | 126..1198 | 5365 | 100 | Plus |
CG11018.a | 1197 | CG11018.a | 53..761 | 1..709 | 3545 | 100 | Plus |
CG11018.a | 1197 | CG11018.a | 757..1197 | 758..1198 | 2190 | 99.7 | Plus |
CG11018.b | 1234 | CG11018.b | 53..161 | 1..109 | 545 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1282..1367 | 1196..1109 | 120 | 61.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 15549734..15549842 | 1..109 | 95 | -> | Plus |
chr2R | 15549896..15550957 | 110..1171 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11018-RA | 1..954 | 56..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11018-RA | 1..954 | 56..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11018-RA | 1..954 | 56..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11018-RA | 1..954 | 56..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11018-RA | 1..954 | 56..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11018-RA | 53..1250 | 1..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11018-RA | 53..1250 | 1..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11018-RA | 53..1250 | 1..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11018-RA | 53..1250 | 1..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11018-RA | 53..1250 | 1..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19662488..19662596 | 1..109 | 100 | -> | Plus |
2R | 19662650..19663738 | 110..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19662488..19662596 | 1..109 | 100 | -> | Plus |
2R | 19662650..19663738 | 110..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19662488..19662596 | 1..109 | 100 | -> | Plus |
2R | 19662650..19663738 | 110..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 15549993..15550101 | 1..109 | 100 | -> | Plus |
arm_2R | 15550155..15551243 | 110..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19663849..19664937 | 110..1198 | 100 | Plus | |
2R | 19663687..19663795 | 1..109 | 100 | -> | Plus |
Translation from 55 to 1008
> GH07940.pep MHWYAILQGFLLGISSIIILWVQGVVGLPLATTDLESLPIVLAEDVPVER APRQVKPDPSTFDIFKVDQSSNNQMQQKSDGFRVFAKKLQDDYHRRAGYN ETNPPPITVTRGSTTAPKKIHKSGIRLFASPQDPPPPEAAAPADGAPAAA GAAEGGAAGGKGTEPPKELTVSIQQFVTNQYGEKEYNAWGVTFGRHFFDT RFAVARHEIPRITVDPKPVRNYYPKMDNLTTVCLNRSTIYNEIKVEKWLM RHVYSIKKKVRPFFFSLRQQLYEKGDSEQCHNESYTDWLEYQECAIRRNQ RMEYFIPKYPLHQLAIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19779-PA | 274 | GF19779-PA | 121..274 | 164..317 | 510 | 55.8 | Plus |
Dana\GF12759-PA | 612 | GF12759-PA | 447..496 | 261..310 | 154 | 54 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21991-PA | 313 | GG21991-PA | 1..313 | 1..317 | 1109 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14616-PA | 180 | GH14616-PA | 28..170 | 170..313 | 311 | 41 | Plus |
Dgri\GH10550-PA | 136 | GH10550-PA | 4..122 | 199..315 | 288 | 47.1 | Plus |
Dgri\GH23784-PA | 136 | GH23784-PA | 4..122 | 199..315 | 288 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11018-PA | 317 | CG11018-PA | 1..317 | 1..317 | 1693 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24599-PA | 199 | GI24599-PA | 49..199 | 168..317 | 390 | 49.7 | Plus |
Dmoj\GI20911-PA | 354 | GI20911-PA | 212..351 | 175..315 | 323 | 45.1 | Plus |
Dmoj\GI13503-PA | 145 | GI13503-PA | 1..140 | 173..314 | 310 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10355-PA | 297 | GL10355-PA | 146..297 | 167..317 | 381 | 48 | Plus |
Dper\GL23531-PA | 301 | GL23531-PA | 45..296 | 75..313 | 364 | 34.8 | Plus |
Dper\GL23530-PA | 482 | GL23530-PA | 371..471 | 216..315 | 244 | 46.5 | Plus |
Dper\GL10191-PA | 692 | GL10191-PA | 536..690 | 166..313 | 215 | 33.1 | Plus |
Dper\GL17269-PA | 134 | GL17269-PA | 33..107 | 241..315 | 181 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10710-PB | 324 | GA10710-PB | 173..324 | 167..317 | 382 | 48 | Plus |
Dpse\GA27293-PA | 310 | GA27293-PA | 53..305 | 75..313 | 349 | 33.6 | Plus |
Dpse\GA27292-PA | 294 | GA27292-PA | 31..289 | 67..313 | 319 | 34.9 | Plus |
Dpse\GA24444-PA | 345 | GA24444-PA | 163..328 | 157..313 | 291 | 40.1 | Plus |
Dpse\GA30158-PA | 468 | GA30158-PA | 331..457 | 190..315 | 278 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21978-PA | 317 | GM21978-PA | 1..317 | 1..317 | 1422 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11474-PA | 316 | GD11474-PA | 1..316 | 1..317 | 1351 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16126-PA | 165 | GJ16126-PA | 3..152 | 167..315 | 376 | 49.3 | Plus |
Dvir\GJ11864-PA | 152 | GJ11864-PA | 7..149 | 172..314 | 340 | 42.7 | Plus |
Dvir\GJ19876-PA | 360 | GJ19876-PA | 220..358 | 175..314 | 326 | 44 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15884-PA | 233 | GK15884-PA | 76..226 | 161..314 | 430 | 50.3 | Plus |
Dwil\GK10974-PA | 212 | GK10974-PA | 9..212 | 122..316 | 412 | 42.6 | Plus |
Dwil\GK11723-PA | 145 | GK11723-PA | 2..135 | 182..314 | 338 | 48.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12071-PA | 309 | GE12071-PA | 1..309 | 1..317 | 1194 | 74.1 | Plus |
Translation from 55 to 1008
> GH07940.hyp MHWYAILQGFLLGISSIIILWVQGVVGLPLATTDLESLPIVLAEDVPVER APRQVKPDPSTFDIFKVDQSSNNQMQQKSDGFRVFAKKLQDDYHRRAGYN ETNPPPITVTRGSTTAPKKIHKSGIRLFASPQDPPPPEAAAPADGAPAAA GAAEGGAAGGKGTEPPKELTVSIQQFVTNQYGEKEYNAWGVTFGRHFFDT RFAVARHEIPRITVDPKPVRNYYPKMDNLTTVCLNRSTIYNEIKVEKWLM RHVYSIKKKVRPFFFSLRQQLYEKGDSEQCHNESYTDWLEYQECAIRRNQ RMEYFIPKYPLHQLAIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11018-PA | 317 | CG11018-PA | 1..317 | 1..317 | 1693 | 100 | Plus |