BDGP Sequence Production Resources |
Search the DGRC for GH07971
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 79 |
Well: | 71 |
Vector: | pOT2 |
Associated Gene/Transcript | Prosbeta4R2-RA |
Protein status: | GH07971.pep: gold |
Preliminary Size: | 1394 |
Sequenced Size: | 1321 |
Gene | Date | Evidence |
---|---|---|
CG17302 | 2001-01-01 | Release 2 assignment |
CG9880 | 2001-01-01 | Release 2 assignment |
CG17302 | 2002-05-15 | Blastp of sequenced clone |
CG17302 | 2008-04-29 | Release 5.5 accounting |
CG17302 | 2008-08-15 | Release 5.9 accounting |
CG17302 | 2008-12-18 | 5.12 accounting |
1321 bp (1321 high quality bases) assembled on 2002-05-15
GenBank Submission: AY119488
> GH07971.complete AATATTTCAAAAGTAAACACATAATATTCACAATAGTGTATCACTTTAAT AAAATTTTTGGTTACCATGGCGATGGAAACTATTTTGGGGATCAAGGGAC CAGACTTTGTGATGCTAGCATCAGATACAATGCAGGCCAAATCGCTGGTC TTCATGAAAGATGACCAATCAAAAATCCACCGACTATCAGACTTCAATAT GATGGCCACGGTGGGTGATGGTGGCGATACCATTCAGTTCACCGACTTCA TATCCAAAAATTTGCATCTGTACAAGATTTCCCACGGATACCATCTAAGT GCGAAGTCAGCTGCCCATTTTACCAGGAAAACACTGGCGGATTATATAAG GACCAACACCAGATACCAGGTGGCAATGCTCCTGGCAGGATACGATGCGG TTGAGGGACCTGACCTCCACTACATCGACTCCTATGGCGCTGCTCAGTCA ATCAATCATGCAGGTCATGGTTGGGGCAGCATGTTCTGTGGCAGCATTCT GCAGAGATATTGGAACTCGAAGCTCAGCCAAGAGGATGCCTACTCGCTGA TGAAGAAGTGCGTCCTGGAGATCCAAAGGCGACTGATCATCAACCAGCGG AACTTTGAGGTGTATGTAGTGGACAGCAAGGGAATGCGCAAGATGGAGGC CATCAATCCAGGATCCCTAAACAAGGAGTCGATAAGCCTGAGTTGGTAAA GCGGAAAACATTAAAGCCATGCTCGGTGCAACTCCTTTGCTTCATAAAGC ATCCTTTAATGCCTAATAATTGTGCAGTTGGTTTTTGGCTAACTTTCACT GCGATGCTCGAACAACTTCCCAGGGATTAGTTGACGTGACCGGTTGGATT TGAGTGGTCAGTCGGAAGAGGAGGAGAAACGACAGCCAGCCAAGTTGCCA AGTTTGCTCGAGGGCGGCTGCGTATGGATGGGGATTCAATTTAAGTTGTG GGGACTCCCCCATGATGACCATGCGTGGCAGGAGTGCACACACAGGAAAA GAAAGGAGTCCATAAAAATACTGAAAAGAAACGAGGGATAAGAAAAACCA AGCGGCAGTGGCAAAAGTTTCCAATGCACTTAACACTCTGTTCCGAAGGA TGGAATCGAGGAAAAAACTGTCAGTGGCATTGGCAACACATTTATTAATG TGTCAATCGGATTGAAGACTTTCCAAGCCAACGGGAAACGATAAAGTTTT TAGACAGAAAGAGATCCGTGGCTGGGATTACGGTTACGCTGTTGCGACAA ATTATAAAAAATGCTCTTGGTCAGTTTTTCGTTTGGAATAAAAGAGGAAA TACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 2655388..2656101 | 163..876 | 3480 | 99.2 | Plus |
chr2L | 23010047 | chr2L | 2660180..2660608 | 875..1303 | 2130 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 2655164..2655326 | 1..163 | 800 | 99.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2655164..2655326 | 1..163 | 99 | -> | Plus |
chr2L | 2655389..2656101 | 164..876 | 99 | -> | Plus |
chr2L | 2660182..2660608 | 877..1303 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17302-RA | 1..633 | 67..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta4R2-RA | 1..633 | 67..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta4R2-RA | 1..633 | 67..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17302-RA | 1..633 | 67..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta4R2-RA | 1..633 | 67..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17302-RA | 1..1303 | 1..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta4R2-RA | 1..1303 | 1..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta4R2-RB | 1..876 | 1..876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17302-RA | 1..1303 | 1..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta4R2-RB | 1..876 | 1..876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2655394..2655556 | 1..163 | 100 | -> | Plus |
2L | 2655619..2656331 | 164..876 | 100 | -> | Plus |
2L | 2660404..2660830 | 877..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2655394..2655556 | 1..163 | 100 | -> | Plus |
2L | 2655619..2656331 | 164..876 | 100 | -> | Plus |
2L | 2660404..2660830 | 877..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2655394..2655556 | 1..163 | 100 | -> | Plus |
2L | 2655619..2656331 | 164..876 | 100 | -> | Plus |
2L | 2660404..2660830 | 877..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2655394..2655556 | 1..163 | 100 | -> | Plus |
arm_2L | 2655619..2656331 | 164..876 | 100 | -> | Plus |
arm_2L | 2660404..2660830 | 877..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2655619..2656331 | 164..876 | 100 | -> | Plus |
2L | 2660404..2660830 | 877..1303 | 100 | Plus | |
2L | 2655394..2655556 | 1..163 | 100 | -> | Plus |
Translation from 66 to 698
> GH07971.pep MAMETILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVG DGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRY QVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWN SKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRKMEAINPGS LNKESISLSW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13881-PA | 210 | GF13881-PA | 1..210 | 1..210 | 1030 | 88.1 | Plus |
Dana\GF24340-PA | 205 | GF24340-PA | 1..203 | 3..205 | 655 | 56.2 | Plus |
Dana\GF20768-PA | 212 | GF20768-PA | 1..201 | 3..204 | 555 | 49.5 | Plus |
Dana\GF23798-PA | 272 | GF23798-PA | 42..240 | 6..194 | 153 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24870-PA | 210 | GG24870-PA | 1..210 | 1..210 | 1102 | 96.7 | Plus |
Dere\GG20111-PA | 201 | GG20111-PA | 1..199 | 3..201 | 639 | 55.3 | Plus |
Dere\GG24868-PA | 215 | GG24868-PA | 1..205 | 3..207 | 574 | 46.8 | Plus |
Dere\GG18789-PA | 307 | GG18789-PA | 50..230 | 5..189 | 174 | 26.5 | Plus |
Dere\GG15711-PA | 272 | GG15711-PA | 42..198 | 6..166 | 149 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22171-PA | 222 | GH22171-PA | 1..207 | 3..209 | 837 | 70 | Plus |
Dgri\GH11159-PA | 222 | GH11159-PA | 1..207 | 3..209 | 829 | 69.6 | Plus |
Dgri\GH11559-PA | 206 | GH11559-PA | 1..199 | 3..201 | 670 | 58.3 | Plus |
Dgri\GH11158-PA | 397 | GH11158-PA | 1..118 | 46..163 | 229 | 34.7 | Plus |
Dgri\GH16666-PA | 272 | GH16666-PA | 42..198 | 6..166 | 163 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prosbeta4R2-PB | 210 | CG17302-PB | 1..210 | 1..210 | 1094 | 100 | Plus |
Prosbeta4R2-PA | 210 | CG17302-PA | 1..210 | 1..210 | 1094 | 100 | Plus |
Prosbeta4-PB | 201 | CG17331-PB | 1..199 | 3..201 | 609 | 55.3 | Plus |
Prosbeta4-PA | 201 | CG17331-PA | 1..199 | 3..201 | 609 | 55.3 | Plus |
Prosbeta4R1-PA | 215 | CG17301-PA | 1..205 | 3..207 | 525 | 43.9 | Plus |
Prosbeta5R1-PA | 315 | CG9868-PA | 73..258 | 5..193 | 145 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17870-PA | 221 | GI17870-PA | 1..207 | 3..209 | 823 | 69.6 | Plus |
Dmoj\GI17050-PA | 206 | GI17050-PA | 1..199 | 3..201 | 690 | 60.3 | Plus |
Dmoj\GI17867-PA | 214 | GI17867-PA | 1..196 | 3..198 | 466 | 42.3 | Plus |
Dmoj\GI15360-PA | 313 | GI15360-PA | 46..203 | 5..166 | 184 | 29.6 | Plus |
Dmoj\GI11352-PA | 270 | GI11352-PA | 41..198 | 5..166 | 157 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26572-PA | 210 | GL26572-PA | 1..210 | 1..210 | 969 | 81.9 | Plus |
Dper\GL19338-PA | 214 | GL19338-PA | 1..207 | 3..201 | 613 | 53.1 | Plus |
Dper\GL27233-PA | 208 | GL27233-PA | 1..206 | 3..207 | 438 | 39.3 | Plus |
Dper\GL24711-PA | 272 | GL24711-PA | 42..198 | 6..166 | 151 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28985-PA | 210 | GA28985-PA | 1..210 | 1..210 | 969 | 81.9 | Plus |
Dpse\GA14463-PA | 206 | GA14463-PA | 1..199 | 3..201 | 663 | 57.3 | Plus |
Dpse\GA26779-PA | 208 | GA26779-PA | 1..206 | 3..207 | 435 | 39.3 | Plus |
Dpse\GA17382-PA | 272 | GA17382-PA | 42..198 | 6..166 | 150 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18354-PA | 210 | GM18354-PA | 1..210 | 1..210 | 1127 | 99.5 | Plus |
Dsec\GM17161-PA | 201 | GM17161-PA | 1..199 | 3..201 | 635 | 54.8 | Plus |
Dsec\GM18352-PA | 211 | GM18352-PA | 1..195 | 3..197 | 528 | 44.6 | Plus |
Dsec\GM12440-PA | 307 | GM12440-PA | 50..207 | 5..166 | 157 | 27.8 | Plus |
Dsec\GM25498-PA | 272 | GM25498-PA | 42..198 | 6..166 | 150 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23168-PA | 210 | GD23168-PA | 1..210 | 1..210 | 1127 | 99.5 | Plus |
Dsim\GD21900-PA | 201 | GD21900-PA | 1..199 | 3..201 | 638 | 54.8 | Plus |
Dsim\GD23166-PA | 211 | GD23166-PA | 1..195 | 3..197 | 535 | 45.1 | Plus |
Dsim\GD16756-PA | 307 | GD16756-PA | 50..207 | 5..166 | 157 | 27.8 | Plus |
Dsim\GD14518-PA | 272 | GD14518-PA | 42..198 | 6..166 | 150 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17369-PA | 193 | GJ17369-PA | 3..179 | 33..209 | 690 | 67.2 | Plus |
Dvir\GJ17300-PA | 206 | GJ17300-PA | 1..199 | 3..201 | 680 | 59.8 | Plus |
Dvir\GJ17367-PA | 231 | GJ17367-PA | 1..196 | 3..198 | 551 | 49.5 | Plus |
Dvir\GJ16628-PA | 304 | GJ16628-PA | 46..203 | 5..166 | 162 | 26.5 | Plus |
Dvir\GJ11606-PA | 270 | GJ11606-PA | 40..196 | 6..166 | 150 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24489-PA | 210 | GK24489-PA | 1..210 | 1..210 | 960 | 82.4 | Plus |
Dwil\GK15122-PA | 207 | GK15122-PA | 1..200 | 3..202 | 664 | 56.5 | Plus |
Dwil\GK24488-PA | 212 | GK24488-PA | 4..199 | 1..196 | 471 | 43.4 | Plus |
Dwil\GK10550-PA | 272 | GK10550-PA | 41..240 | 5..194 | 169 | 26.2 | Plus |
Dwil\GK25153-PA | 353 | GK25153-PA | 52..210 | 5..166 | 158 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18168-PA | 210 | GE18168-PA | 1..210 | 1..210 | 1119 | 98.6 | Plus |
Dyak\GE13168-PA | 201 | GE13168-PA | 1..199 | 3..201 | 639 | 55.3 | Plus |
Dyak\GE18166-PA | 215 | GE18166-PA | 1..205 | 3..207 | 598 | 47.3 | Plus |
Dyak\GE14876-PA | 1119 | GE14876-PA | 1033..1107 | 121..195 | 176 | 41.3 | Plus |
Dyak\GE14911-PA | 314 | GE14911-PA | 18..74 | 130..186 | 169 | 47.4 | Plus |
Translation from 66 to 698
> GH07971.hyp MAMETILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVG DGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRY QVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWN SKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRKMEAINPGS LNKESISLSW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prosbeta4R2-PB | 210 | CG17302-PB | 1..210 | 1..210 | 1094 | 100 | Plus |
Prosbeta4R2-PA | 210 | CG17302-PA | 1..210 | 1..210 | 1094 | 100 | Plus |
Prosbeta4-PB | 201 | CG17331-PB | 1..199 | 3..201 | 609 | 55.3 | Plus |
Prosbeta4-PA | 201 | CG17331-PA | 1..199 | 3..201 | 609 | 55.3 | Plus |
Prosbeta4R1-PA | 215 | CG17301-PA | 1..205 | 3..207 | 525 | 43.9 | Plus |