BDGP Sequence Production Resources |
Search the DGRC for GH08043
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 80 |
Well: | 43 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3223-RA |
Protein status: | GH08043.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1488 |
Gene | Date | Evidence |
---|---|---|
CG3223 | 2001-01-01 | Release 2 assignment |
CG3223 | 2002-05-17 | Blastp of sequenced clone |
CG3223 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3223 | 2008-04-29 | Release 5.5 accounting |
CG3223 | 2008-08-15 | Release 5.9 accounting |
CG3223 | 2008-12-18 | 5.12 accounting |
1488 bp (1488 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118753
> GH08043.complete AACAAAACAAAATCACCCAGACAAAATAGTGAATTACAAATATTACGCAG ATTCTACATCAACGCACTATGCATACCGTGTACGCGCTTCTGAAGAACAA GCTGAGCGATGTGCATCCCCTACACAACATCGATCTGACGCGGGATGTGG CCTACCTAAAGGCGGTGGTGACCAAAGAGATGCACTTGCAATTCGACGCC AGCGAGTTGGAGATCATCCACCACGGACGCGTGCTGGAGGACGCAGACAC CCTCAACCGAACGCTGCAGCCCAACGCCGTGATCCACTGCTTTCAGAAGA TTAAACGTTACTCGCCGTATGTGCCGCCAGCCGCCGCCGAAATCAACACG AAGCATATTCAAGAGCTGTTTTCGTTGACCTCGCACCTGCAAATCAGCGT TACCTCGCGGTTCAACATTCTGCAGAAGATACTCGCTGAGTATCCGGAAT TTAGGCGAAATCTGGGCGCCCAGGCCCTTATTCGCGACTCCGTACTGTTC AACATGCTGCACGAGCCGGAAGTGGTCCAAAATCTCGTTAAAGATTATCC CCTCATCTGCGAGGCCGCTCCATTCATAGTGGACACCATTCGCAAGGAGC TAGCCAGAAATAGCTCGGCCACGCAGTTGCAGGAGCAAGCTGCTTCGGAG TCTACTACTTCGTCAGAGGAGGAAAACTCTCTGGGTGCAGGCAGCAGCAG CAGTGGTGGAAGCAGCAGCACAGCCGTGGCAGCTGCCGCGGCCGCCAATC GGCGTGATGAGATGGCCAACATCCGTCAGATTAGCCGCCAGCAACTGGCT AACGCATTGGCTAACGTGACCCCGTTTAATTCACTGTCGAATATTGCGCA GAGAAACGCGGACGAGGCCGTGCAGGGTGATGAAAGACCTAGAACCACCT CGGCGCCATTAGCAGGCGTTGGAGGAGCAGCGGGAACAGGCGCAGGAAGC AGCAGTGGAGCCATCAGCAGCGGATCCATATCCTCAGAGTTGCTCCGCAA CGAGCTGGCCCGCGCTTTTCAGTCCCTGTCGCAGGATCAACCGGCGCCTG TGGAGAACATGGAGGTGGAGTCCGGAGAAGGACCAGTACCAGAGCAAGCC GCCACAGCACCAGCCGATGATGTAGATGACGAGGACGATGGTGGAGACGA CAGTGATGTGCTGCCACGCCGCTACCGTCGCCATCGGTTCACCGAACAAC TGCGTACCATGGCCGCCATGGGCTTCATTAATCACACTCAGAACGTTAGT TATCTAGAACTTTCCGATGGGAATGTGGAACACGCTATTAATCTGCTTAT GCTGAGCATGAATTAATAAGGATCGGAATTGACTAAAAAGCCAACATAAT GTGCTTACTTTACGGACTTATATTTATTCTGCTGCTGAGGATTCTGAAGC ATTAAACTCCCAACTTAAGCAAGGAATATCTCTTAATAACTTTTAATAAT TAAATATACGTTTAGAGGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3223-RA | 1553 | CG3223-RA | 86..1553 | 1..1468 | 7340 | 100 | Plus |
CG3223.a | 1487 | CG3223.a | 66..1487 | 47..1468 | 7095 | 99.9 | Plus |
CG3223.b | 1538 | CG3223.b | 280..1538 | 210..1468 | 6295 | 100 | Plus |
CG3223.b | 1538 | CG3223.b | 50..259 | 1..210 | 1050 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 3836222..3837062 | 628..1468 | 4205 | 100 | Plus |
chr3R | 27901430 | chr3R | 3835746..3836163 | 210..627 | 2090 | 100 | Plus |
chr3R | 27901430 | chr3R | 3835464..3835673 | 1..210 | 1050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 3835464..3835673 | 1..210 | 100 | -> | Plus |
chr3R | 3835747..3836163 | 211..627 | 100 | -> | Plus |
chr3R | 3836222..3837062 | 628..1468 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3223-RA | 1..1248 | 69..1316 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3223-RA | 1..1248 | 69..1316 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3223-RA | 1..1248 | 69..1316 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3223-RA | 1..1248 | 69..1316 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3223-RA | 1..1248 | 69..1316 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3223-RA | 50..1517 | 1..1468 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3223-RA | 50..1517 | 1..1468 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3223-RA | 21..1488 | 1..1468 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3223-RA | 50..1517 | 1..1468 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3223-RA | 21..1488 | 1..1468 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8009703..8010119 | 211..627 | 100 | -> | Plus |
3R | 8009420..8009629 | 1..210 | 100 | -> | Plus |
3R | 8010178..8011018 | 628..1468 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8009703..8010119 | 211..627 | 100 | -> | Plus |
3R | 8009420..8009629 | 1..210 | 100 | -> | Plus |
3R | 8010178..8011018 | 628..1468 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8009703..8010119 | 211..627 | 100 | -> | Plus |
3R | 8009420..8009629 | 1..210 | 100 | -> | Plus |
3R | 8010178..8011018 | 628..1468 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 3835142..3835351 | 1..210 | 100 | -> | Plus |
arm_3R | 3835425..3835841 | 211..627 | 100 | -> | Plus |
arm_3R | 3835900..3836740 | 628..1468 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7750251..7750460 | 1..210 | 100 | -> | Plus |
3R | 7750534..7750950 | 211..627 | 100 | -> | Plus |
3R | 7751009..7751849 | 628..1468 | 100 | Plus |
Translation from 68 to 1315
> GH08043.pep MHTVYALLKNKLSDVHPLHNIDLTRDVAYLKAVVTKEMHLQFDASELEII HHGRVLEDADTLNRTLQPNAVIHCFQKIKRYSPYVPPAAAEINTKHIQEL FSLTSHLQISVTSRFNILQKILAEYPEFRRNLGAQALIRDSVLFNMLHEP EVVQNLVKDYPLICEAAPFIVDTIRKELARNSSATQLQEQAASESTTSSE EENSLGAGSSSSGGSSSTAVAAAAAANRRDEMANIRQISRQQLANALANV TPFNSLSNIAQRNADEAVQGDERPRTTSAPLAGVGGAAGTGAGSSSGAIS SGSISSELLRNELARAFQSLSQDQPAPVENMEVESGEGPVPEQAATAPAD DVDDEDDGGDDSDVLPRRYRRHRFTEQLRTMAAMGFINHTQNVSYLELSD GNVEHAINLLMLSMN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18153-PA | 400 | GF18153-PA | 1..400 | 1..415 | 1365 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14341-PA | 415 | GG14341-PA | 1..415 | 1..415 | 1679 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17333-PA | 417 | GH17333-PA | 4..414 | 2..411 | 1250 | 67.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3223-PA | 415 | CG3223-PA | 1..415 | 1..415 | 2078 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10258-PA | 413 | GI10258-PA | 5..413 | 3..415 | 1343 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21478-PA | 399 | GL21478-PA | 1..399 | 1..415 | 1467 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16770-PA | 399 | GA16770-PA | 1..399 | 1..415 | 1465 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10993-PA | 415 | GM10993-PA | 1..415 | 1..415 | 2129 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19963-PA | 415 | GD19963-PA | 1..415 | 1..415 | 2136 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11064-PA | 416 | GJ11064-PA | 4..416 | 2..415 | 1215 | 69 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13251-PA | 412 | GK13251-PA | 1..412 | 1..415 | 1311 | 70.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24960-PA | 414 | GE24960-PA | 1..414 | 1..415 | 1665 | 91.8 | Plus |
Translation from 68 to 1315
> GH08043.hyp MHTVYALLKNKLSDVHPLHNIDLTRDVAYLKAVVTKEMHLQFDASELEII HHGRVLEDADTLNRTLQPNAVIHCFQKIKRYSPYVPPAAAEINTKHIQEL FSLTSHLQISVTSRFNILQKILAEYPEFRRNLGAQALIRDSVLFNMLHEP EVVQNLVKDYPLICEAAPFIVDTIRKELARNSSATQLQEQAASESTTSSE EENSLGAGSSSSGGSSSTAVAAAAAANRRDEMANIRQISRQQLANALANV TPFNSLSNIAQRNADEAVQGDERPRTTSAPLAGVGGAAGTGAGSSSGAIS SGSISSELLRNELARAFQSLSQDQPAPVENMEVESGEGPVPEQAATAPAD DVDDEDDGGDDSDVLPRRYRRHRFTEQLRTMAAMGFINHTQNVSYLELSD GNVEHAINLLMLSMN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3223-PA | 415 | CG3223-PA | 1..415 | 1..415 | 2078 | 100 | Plus |