BDGP Sequence Production Resources |
Search the DGRC for GH08048
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 80 |
Well: | 48 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1774-RA |
Protein status: | GH08048.pep: gold |
Preliminary Size: | 1703 |
Sequenced Size: | 1754 |
Gene | Date | Evidence |
---|---|---|
CG1774 | 2001-01-01 | Release 2 assignment |
CG1774 | 2001-09-19 | Blastp of sequenced clone |
CG1774 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1774 | 2008-04-29 | Release 5.5 accounting |
CG1774 | 2008-08-15 | Release 5.9 accounting |
CG1774 | 2008-12-18 | 5.12 accounting |
1754 bp (1754 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058316
> GH08048.complete CAGCCCAAGTGAAAGCACTTCATGTAAATCCGAACGAGCTGAGGCGTATT ACGTATTAGGAGCTGGGAACTACACCCAAGTGCCCTGCAAGTGATTTCCC CAAAAAATCCATGCCATTGGATCCCCCCAGTAGGCGGTTCAACTAGTTGC AATTTCCAAGGCCCCGTCAACCTAGACACCTGGAAACGATGCTGTGTACC TTGGCACGGAGTTTTGGAACGGCGCTGGCGAGGAGGAGCTCTTGGTCGAC TGCCCGGCGAAGGCGACTGCTGGCCACAAGTCCCCCCCCTTTGGCGAGCC AGCAGATGCCCAGGAGCTATACGCTAGACAACGGACCCAAGGTGAAGTCC GATCATCGCTCTGGAACGATGGTGGAGGTGGCTCGTGTCATTCGCGAGCA ATCCGGCGTGGACGTGGGATACCATACGATTCCCAAGCCCCGAGATCATC TCCTGCAGCACGAGCCGAAGAGGGAGGAGCTTCCACCAAGAACTATGCTG GATTCGCACACCACGGCCATTCTGCCCCTGAGCTCCAGTGAGCTAATCCG CGAGAGCTACGTGAATCACCTGGGAAGGGTGAGATTGGGCCGAATTATGG AGGAGTTGGACATGTTTGCCGTATGGATCTGCCATCGTCATGTGAAGCTG CCCAAGCTGCCGAAGGGAGTGCCTTTGCCTTACACCTTTGTCACGTTGCT GGTCGACAAAGTGGAGTTCACCAACCTGGAGCGGTTGCAGGTCAACCAGG ACATCGAGATCAGTGGTCACATCTCGTGGGCGGGGCGGAGCTCCATGGAG ATTACCATCTATGTGAGGCAGTTGGCCCACGGCGAATATATTGATGTAAC AAAAGCAATCTTCGTCATGGTGGCCAGAAATGCCACCAATACGGGACCGG CTCCCATTAATCCTATAGAGGTTGGCGATGAAACCGAGAAGCTCATTTGG GAGCAGGCAGAGAAGCGGCAAAAAGTGCGCAAGTCTTCTGCCATGGACTC AGTGTTCAACTCGCCGCCCAGGGAGCACGAACAGGCCCTCATGTACGAGA TCCTCAAGAGAACCACCCCAGCCAATAGTATGGATCTCAACAAGCGTGTG CTGCCGCCGAAATGCCGCTGGATGGAGGACTCTATGCAGTCTACGATGAT TGCTCCATTTCCGGAGAACAGGAATGCGCAGAACACCATCTTTGGGGGCT ATCTCATGCGCCAGGCCGTTGAAATCAGCTTCATAATGGCTAGCATCTAT CTGGGCGATCGGCCCACCCTCAGGTGCATCTCGGACATTAGTTTCATGCA CCCGGTGCATGTGGATCGGTTCCTCCAGCTCACCGCCCACGTTGTTTACG CCGCCCAGAACTACGTCCAGCTGATGACCGTGGCCCAGATTTGGGATGCC AAGAGCGGCAAAGTGCAGACCACCAATGTCTTCTACTTGACCTATCGGGC GGACAAGGTGCTGGACGAAGTCCTCCCGCGATCCTACCGAGAGATGTTGT GGTACGTCCACGGTAGGCGGAAACTCCTGGGCGCTCTGCACTTGCAGCCG GAGTACCCCGATCCTATCGAAGTGGCCAAAGAGAGCTCAAATCATATCAG CACTTAGAATTAGCGCTAATGTAAATCGAAGTTGTAGTTGATCCAAATAT GTTAATCTGATGGAATTTTAACTTTATAGCTGTTATTTTATAATTTATAG GATATATCAATGAAATAAAATTGTAGAAAGGAAAAAAAAAAAAAAAAAAA AAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 27415291..27415668 | 1..378 | 98 | -> | Plus |
chr3R | 27415726..27417078 | 379..1731 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1774-RA | 1..1419 | 189..1607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1774-RA | 1..1419 | 189..1607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1774-RA | 1..1419 | 189..1607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1774-RA | 1..1419 | 189..1607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1774-RA | 1..1419 | 189..1607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1774-RA | 189..1919 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1774-RA | 189..1919 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1774-RA | 189..1919 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1774-RA | 189..1919 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1774-RA | 130..1860 | 1..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31592932..31593309 | 1..378 | 100 | -> | Plus |
3R | 31593367..31594719 | 379..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31592932..31593309 | 1..378 | 100 | -> | Plus |
3R | 31593367..31594719 | 379..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31592932..31593309 | 1..378 | 100 | -> | Plus |
3R | 31593367..31594719 | 379..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 27418654..27419031 | 1..378 | 100 | -> | Plus |
arm_3R | 27419089..27420441 | 379..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31333763..31334140 | 1..378 | 100 | -> | Plus |
3R | 31334198..31335550 | 379..1731 | 100 | Plus |
Translation from 188 to 1606
> GH08048.hyp MLCTLARSFGTALARRSSWSTARRRRLLATSPPPLASQQMPRSYTLDNGP KVKSDHRSGTMVEVARVIREQSGVDVGYHTIPKPRDHLLQHEPKREELPP RTMLDSHTTAILPLSSSELIRESYVNHLGRVRLGRIMEELDMFAVWICHR HVKLPKLPKGVPLPYTFVTLLVDKVEFTNLERLQVNQDIEISGHISWAGR SSMEITIYVRQLAHGEYIDVTKAIFVMVARNATNTGPAPINPIEVGDETE KLIWEQAEKRQKVRKSSAMDSVFNSPPREHEQALMYEILKRTTPANSMDL NKRVLPPKCRWMEDSMQSTMIAPFPENRNAQNTIFGGYLMRQAVEISFIM ASIYLGDRPTLRCISDISFMHPVHVDRFLQLTAHVVYAAQNYVQLMTVAQ IWDAKSGKVQTTNVFYLTYRADKVLDEVLPRSYREMLWYVHGRRKLLGAL HLQPEYPDPIEVAKESSNHIST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1774-PB | 472 | CG1774-PB | 1..472 | 1..472 | 2457 | 100 | Plus |
CG1774-PA | 472 | CG1774-PA | 1..472 | 1..472 | 2457 | 100 | Plus |
CG1635-PA | 448 | CG1635-PA | 6..440 | 13..445 | 1115 | 46.9 | Plus |
CG1638-PB | 443 | CG1638-PB | 32..441 | 38..449 | 1053 | 47.3 | Plus |
CG13771-PA | 451 | CG13771-PA | 9..423 | 25..444 | 934 | 44.4 | Plus |
Translation from 188 to 1606
> GH08048.pep MLCTLARSFGTALARRSSWSTARRRRLLATSPPPLASQQMPRSYTLDNGP KVKSDHRSGTMVEVARVIREQSGVDVGYHTIPKPRDHLLQHEPKREELPP RTMLDSHTTAILPLSSSELIRESYVNHLGRVRLGRIMEELDMFAVWICHR HVKLPKLPKGVPLPYTFVTLLVDKVEFTNLERLQVNQDIEISGHISWAGR SSMEITIYVRQLAHGEYIDVTKAIFVMVARNATNTGPAPINPIEVGDETE KLIWEQAEKRQKVRKSSAMDSVFNSPPREHEQALMYEILKRTTPANSMDL NKRVLPPKCRWMEDSMQSTMIAPFPENRNAQNTIFGGYLMRQAVEISFIM ASIYLGDRPTLRCISDISFMHPVHVDRFLQLTAHVVYAAQNYVQLMTVAQ IWDAKSGKVQTTNVFYLTYRADKVLDEVLPRSYREMLWYVHGRRKLLGAL HLQPEYPDPIEVAKESSNHIST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22972-PA | 464 | GF22972-PA | 5..464 | 5..471 | 1778 | 71.5 | Plus |
Dana\GF22971-PA | 448 | GF22971-PA | 1..441 | 5..446 | 1124 | 46.7 | Plus |
Dana\GF15441-PA | 449 | GF15441-PA | 27..415 | 52..446 | 989 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11817-PA | 472 | GG11817-PA | 1..472 | 1..472 | 2392 | 93.4 | Plus |
Dere\GG11815-PA | 448 | GG11815-PA | 6..441 | 13..446 | 1164 | 48.3 | Plus |
Dere\GG11816-PA | 382 | GG11816-PA | 6..377 | 73..446 | 996 | 50 | Plus |
Dere\GG23601-PA | 436 | GG23601-PA | 35..420 | 51..444 | 977 | 47.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18639-PA | 422 | GH18639-PA | 6..411 | 51..457 | 1487 | 65.1 | Plus |
Dgri\GH18638-PA | 448 | GH18638-PA | 52..446 | 58..453 | 1121 | 50 | Plus |
Dgri\GH13347-PA | 459 | GH13347-PA | 46..437 | 51..446 | 1117 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1774-PB | 472 | CG1774-PB | 1..472 | 1..472 | 2457 | 100 | Plus |
CG1774-PA | 472 | CG1774-PA | 1..472 | 1..472 | 2457 | 100 | Plus |
CG1635-PA | 448 | CG1635-PA | 6..440 | 13..445 | 1115 | 46.9 | Plus |
CG1638-PB | 443 | CG1638-PB | 32..441 | 38..449 | 1053 | 47.3 | Plus |
CG13771-PA | 451 | CG13771-PA | 9..423 | 25..444 | 934 | 44.4 | Plus |
CG13771-PB | 184 | CG13771-PB | 9..128 | 25..144 | 260 | 46.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23399-PA | 438 | GI23399-PA | 1..414 | 46..459 | 1467 | 61.8 | Plus |
Dmoj\GI23398-PA | 442 | GI23398-PA | 37..441 | 51..456 | 1151 | 50.5 | Plus |
Dmoj\GI17734-PA | 407 | GI17734-PA | 1..381 | 61..446 | 1084 | 50.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23636-PA | 470 | GL23636-PA | 5..455 | 5..458 | 1686 | 67.6 | Plus |
Dper\GL23635-PA | 449 | GL23635-PA | 55..449 | 58..453 | 1156 | 51 | Plus |
Dper\GL26200-PA | 410 | GL26200-PA | 19..403 | 55..446 | 1012 | 51.3 | Plus |
Dper\GL26203-PA | 313 | GL26203-PA | 1..306 | 103..446 | 678 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26674-PA | 470 | GA26674-PA | 5..455 | 5..458 | 1684 | 67.2 | Plus |
Dpse\GA26673-PA | 449 | GA26673-PA | 55..449 | 58..453 | 1160 | 51.3 | Plus |
Dpse\GA28071-PA | 410 | GA28071-PA | 19..403 | 55..446 | 1006 | 51 | Plus |
Dpse\GA27991-PA | 321 | GA27991-PA | 1..314 | 126..446 | 797 | 49.8 | Plus |
Dpse\GA28073-PA | 269 | GA28073-PA | 25..266 | 88..336 | 608 | 51 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16435-PA | 472 | GM16435-PA | 1..472 | 1..472 | 2464 | 97 | Plus |
Dsec\GM16432-PA | 448 | GM16432-PA | 6..445 | 13..450 | 1143 | 46.4 | Plus |
Dsec\GM16434-PA | 389 | GM16434-PA | 1..387 | 61..449 | 1006 | 48.3 | Plus |
Dsec\GM14023-PA | 452 | GM14023-PA | 9..423 | 25..444 | 970 | 44.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21587-PA | 448 | GD21587-PA | 6..445 | 13..450 | 1151 | 46.6 | Plus |
Dsim\GD21588-PA | 399 | GD21588-PA | 1..390 | 61..449 | 985 | 47.7 | Plus |
Dsim\GD22557-PA | 452 | GD22557-PA | 9..423 | 25..444 | 959 | 43.9 | Plus |
Dsim\GD21589-PA | 75 | GD21589-PA | 1..64 | 1..64 | 293 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23090-PA | 427 | GJ23090-PA | 6..414 | 51..459 | 1581 | 67 | Plus |
Dvir\GJ17560-PA | 465 | GJ17560-PA | 51..440 | 53..446 | 1127 | 52.7 | Plus |
Dvir\GJ23089-PA | 455 | GJ23089-PA | 59..453 | 58..453 | 1065 | 50.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11722-PA | 468 | GK11722-PA | 42..460 | 51..472 | 1695 | 71.6 | Plus |
Dwil\GK15457-PA | 462 | GK15457-PA | 43..440 | 54..456 | 1173 | 54.1 | Plus |
Dwil\GK11721-PA | 453 | GK11721-PA | 57..453 | 56..453 | 1072 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10951-PA | 473 | GE10951-PA | 2..473 | 1..472 | 2406 | 94.5 | Plus |
Dyak\GE10948-PA | 448 | GE10948-PA | 6..445 | 13..450 | 1162 | 47.1 | Plus |
Dyak\GE10950-PA | 382 | GE10950-PA | 6..377 | 73..446 | 995 | 49.5 | Plus |
Dyak\GE18421-PA | 442 | GE18421-PA | 32..420 | 48..444 | 967 | 45.5 | Plus |