BDGP Sequence Production Resources |
Search the DGRC for GH08155
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 81 |
Well: | 55 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5888-RA |
Protein status: | GH08155.pep: gold |
Preliminary Size: | 1954 |
Sequenced Size: | 1896 |
Gene | Date | Evidence |
---|---|---|
CG5888 | 2001-01-01 | Release 2 assignment |
CG5888 | 2002-06-07 | Blastp of sequenced clone |
CG5888 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5888 | 2008-04-29 | Release 5.5 accounting |
CG5888 | 2008-08-15 | Release 5.9 accounting |
CG5888 | 2008-12-18 | 5.12 accounting |
1896 bp (1896 high quality bases) assembled on 2002-06-07
GenBank Submission: AY119489
> GH08155.complete CTGTGTGTTGAACGCTCTGGTTTTTCATTTCGAATGCGTGGGATCGGCTC AATAATATAGACTTAACTCGCCCTATACCAAAATAATCAACTAATTGCCA TATTTTGAGAATTCATTCCATTATTTTTGTTTGCGATCAGTCTGCTCGGA GTCCTAGCCTCAGGATGTGGTGGCTACTTCTTTTGCTGTCCCTAATTGCG CCGTCGTGGCAGGAGAATGCCACAGTGATCAATCCAAGTTATGTGACCAA AGCTGGTTGTGAGGCATTGGTCAAGGAACCAAATCTCTGCGAGTGCCAGG AGCAGGAGATCAAGTGCGAGAACCTTCAATTGCACAGTGATAATTTGCAG TTATACGGCATTAGCTGTAGTATATTCGATGCCAGGGGATTCGGCTATAT ACCACCGCTTAAGGTGGGCAATATCGGTTCCCTGATCGTTCAAAACTGTG CCATACCAAATGCAGAAAGCATCAAATACTTGCTCAGTAAGCTGGGTGTT AGCAACTACACCGAACTGGAGATCTTCAACTATTTCGATCCCAAGAAAAC GGATCGAGGCGAGGTCCTGCAGCAACACTACACGGATCACGAGAGTCTGA AGAAAGTATCCATCATTGGATTCAAGTCAACACTGCCTGAAAATTTTCTT GAAAACCTGCCGGCACTACAACAACTCTCCTTAAAGGGAAGCAGTGATTT GCCCGGTAACATTTTGCATCCTTTGAAAAATCTAACCCATTTGGAAATTG TGGTCAAGAATTTGGGCAAGGTGTCGGGTGCAATATTTGCAAAGCAATCG AAGCTAAAACATCTGATGATCGACTGCGATGCCAAGAACAGTAGTGTCGA AATGTCCGCTTTTGGACCCCAAGAACTCTGGCACATGACCGAACTTCAGT CGATCGAGCTCTTCAATTGCGGTGATAATGTGCCAACCGAGTTGTTCTGG ATGTCGGAGCAATTGGCATACATTGGAATAAGGAGCAACATCAGCTATTT GAGCAAGGACTTCCTTAAGGTGCAAAAGAAACTGCTCACCTTAAGATTGG AAAGAAACAATATTGCCAGGCTGCCCGATCAGCTTTTCAGGAACACTCCC TTGATTTTAGAGATTCACTTGGCGTTCAATAATTTGGATCGCATTCAGAG CGGCCTTTTTGACAAGTTAAAGAACCTACAGGTGCTGAACTTGGAGCACA ATCCGATAACCACCATTGCCCTGAATGCCTTTACTCCCATCCCAACTGCC CATATCTACGTGGGCAAACTCTTTAAGGCGGCGAAAAATGCCGACTGGGC TCGATCCACGAATGCAACAATCTGCGAGGAGGAGTATATCTACGGGGTGT GCATCTACTGCAAGCGAGATGAGTATCTGGACCACTTTGCCGACTCGGAG AACTGCAATAAGCCAAATCCGAAGGCCAAGGATGTGCTAGCCAAGAAGGC GTACGAAAATCAGCTGAAGGCGATGCCAACGCACTCCTGGAAAAAGGCCA AGGAATATCCCGTTGAGGAAGAGCAGCCCTAAGCTCCAAACGGTTCGTTG GGATTTTACGCATCAGTACTAACTAGTATATGGATATCTGAGTAGCTTAT TTCTGAGACTATAATGAGATTAAAATAGGCTGAAGCTATTTGTTTCCCGA ATAACTTAAAATTAATACTCCCATATATGTTCACCTGCTAAGTATCTTTT GAAATATAACACGATTTGTATCTTTAGTGTAAAAGTTTTGAAATAGTTGC TATCATTAAAGACTATAATTTTATGTTTGCTGATTGTAAGACTATAAAAT CGAAAAGTTGGAAATATTACTGTATCAATAAACTTATGAAATAAAGATAT TGAAGAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5888-RA | 2005 | CG5888-RA | 142..2000 | 1..1859 | 9295 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 16403771..16404779 | 1150..142 | 5015 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 16403316..16403673 | 1506..1149 | 1760 | 99.4 | Minus |
chr2L | 23010047 | chr2L | 16399008..16399359 | 1858..1507 | 1745 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 16447140..16447272 | 133..1 | 665 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16404939..16405956 | 1150..133 | 5090 | 100 | Minus |
2L | 23513712 | 2L | 16404486..16404843 | 1506..1149 | 1790 | 100 | Minus |
2L | 23513712 | 2L | 16400174..16400526 | 1859..1507 | 1765 | 100 | Minus |
2L | 23513712 | 2L | 16448314..16448446 | 133..1 | 665 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16404939..16405956 | 1150..133 | 5090 | 100 | Minus |
2L | 23513712 | 2L | 16404486..16404843 | 1506..1149 | 1790 | 100 | Minus |
2L | 23513712 | 2L | 16400174..16400526 | 1859..1507 | 1765 | 100 | Minus |
2L | 23513712 | 2L | 16448314..16448446 | 133..1 | 665 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 16399008..16399359 | 1507..1858 | 99 | <- | Minus |
chr2L | 16403316..16403671 | 1151..1506 | 99 | <- | Minus |
chr2L | 16403771..16404783 | 136..1150 | 99 | <- | Minus |
chr2L | 16447140..16447272 | 1..135 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5888-RA | 1..1368 | 165..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5888-RA | 1..1368 | 165..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5888-RA | 1..1368 | 165..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5888-RA | 1..1368 | 165..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5888-RA | 1..1368 | 165..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5888-RA | 20..1877 | 1..1858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5888-RA | 20..1877 | 1..1858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5888-RA | 24..1881 | 1..1858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5888-RA | 20..1877 | 1..1858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5888-RA | 24..1881 | 1..1858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16400175..16400526 | 1507..1858 | 100 | <- | Minus |
2L | 16404486..16404841 | 1151..1506 | 100 | <- | Minus |
2L | 16404939..16405955 | 134..1150 | 100 | <- | Minus |
2L | 16448314..16448446 | 1..133 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16400175..16400526 | 1507..1858 | 100 | <- | Minus |
2L | 16404486..16404841 | 1151..1506 | 100 | <- | Minus |
2L | 16404939..16405955 | 134..1150 | 100 | <- | Minus |
2L | 16448314..16448446 | 1..133 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16400175..16400526 | 1507..1858 | 100 | <- | Minus |
2L | 16404486..16404841 | 1151..1506 | 100 | <- | Minus |
2L | 16404939..16405955 | 134..1150 | 100 | <- | Minus |
2L | 16448314..16448446 | 1..133 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 16400175..16400526 | 1507..1858 | 100 | <- | Minus |
arm_2L | 16404486..16404841 | 1151..1506 | 100 | <- | Minus |
arm_2L | 16404939..16405955 | 134..1150 | 100 | <- | Minus |
arm_2L | 16448314..16448446 | 1..133 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16400175..16400526 | 1507..1858 | 100 | <- | Minus |
2L | 16404486..16404841 | 1151..1506 | 100 | <- | Minus |
2L | 16404939..16405955 | 134..1150 | 100 | <- | Minus |
2L | 16448314..16448446 | 1..133 | 100 | Minus |
Translation from 164 to 1531
> GH08155.pep MWWLLLLLSLIAPSWQENATVINPSYVTKAGCEALVKEPNLCECQEQEIK CENLQLHSDNLQLYGISCSIFDARGFGYIPPLKVGNIGSLIVQNCAIPNA ESIKYLLSKLGVSNYTELEIFNYFDPKKTDRGEVLQQHYTDHESLKKVSI IGFKSTLPENFLENLPALQQLSLKGSSDLPGNILHPLKNLTHLEIVVKNL GKVSGAIFAKQSKLKHLMIDCDAKNSSVEMSAFGPQELWHMTELQSIELF NCGDNVPTELFWMSEQLAYIGIRSNISYLSKDFLKVQKKLLTLRLERNNI ARLPDQLFRNTPLILEIHLAFNNLDRIQSGLFDKLKNLQVLNLEHNPITT IALNAFTPIPTAHIYVGKLFKAAKNADWARSTNATICEEEYIYGVCIYCK RDEYLDHFADSENCNKPNPKAKDVLAKKAYENQLKAMPTHSWKKAKEYPV EEEQP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15883-PA | 459 | GF15883-PA | 1..448 | 1..446 | 1999 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20127-PA | 456 | GG20127-PA | 11..456 | 11..455 | 2278 | 95.3 | Plus |
Dere\GG11504-PA | 1097 | GG11504-PA | 77..434 | 66..356 | 188 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH25030-PA | 443 | GH25030-PA | 16..442 | 16..439 | 1446 | 62.7 | Plus |
Dgri\GH14238-PA | 1111 | GH14238-PA | 78..414 | 66..359 | 155 | 22.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5888-PB | 455 | CG5888-PB | 1..455 | 1..455 | 2396 | 100 | Plus |
CG5888-PA | 455 | CG5888-PA | 1..455 | 1..455 | 2396 | 100 | Plus |
Tl-PD | 1097 | CG5490-PD | 42..434 | 41..356 | 184 | 23.1 | Plus |
Tl-PB | 1097 | CG5490-PB | 42..434 | 41..356 | 184 | 23.1 | Plus |
Tl-PC | 1117 | CG5490-PC | 42..434 | 41..356 | 184 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13835-PA | 450 | GI13835-PA | 8..447 | 1..437 | 1408 | 61.1 | Plus |
Dmoj\GI22147-PA | 1104 | GI22147-PA | 11..412 | 4..359 | 170 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18481-PA | 511 | GL18481-PA | 82..500 | 13..434 | 1605 | 72.1 | Plus |
Dper\GL27223-PA | 350 | GL27223-PA | 78..319 | 66..312 | 186 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19205-PA | 447 | GA19205-PA | 20..436 | 15..434 | 1605 | 72.2 | Plus |
Dpse\GA23316-PA | 132 | GA23316-PA | 1..121 | 313..434 | 508 | 76.2 | Plus |
Dpse\Tl-PA | 1100 | GA18922-PA | 78..435 | 66..357 | 254 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17176-PA | 456 | GM17176-PA | 1..456 | 1..455 | 2397 | 99.3 | Plus |
Dsec\GM10345-PA | 653 | GM10345-PA | 42..434 | 41..356 | 179 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21911-PA | 456 | GD21911-PA | 1..456 | 1..455 | 2391 | 98.9 | Plus |
Dsim\Tl-PA | 1096 | GD21307-PA | 42..434 | 41..356 | 177 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17454-PA | 443 | GJ17454-PA | 1..440 | 1..437 | 1386 | 62.4 | Plus |
Dvir\Tl-PA | 1114 | GJ24265-PA | 21..422 | 4..359 | 169 | 22.7 | Plus |
Translation from 164 to 1531
> GH08155.hyp MWWLLLLLSLIAPSWQENATVINPSYVTKAGCEALVKEPNLCECQEQEIK CENLQLHSDNLQLYGISCSIFDARGFGYIPPLKVGNIGSLIVQNCAIPNA ESIKYLLSKLGVSNYTELEIFNYFDPKKTDRGEVLQQHYTDHESLKKVSI IGFKSTLPENFLENLPALQQLSLKGSSDLPGNILHPLKNLTHLEIVVKNL GKVSGAIFAKQSKLKHLMIDCDAKNSSVEMSAFGPQELWHMTELQSIELF NCGDNVPTELFWMSEQLAYIGIRSNISYLSKDFLKVQKKLLTLRLERNNI ARLPDQLFRNTPLILEIHLAFNNLDRIQSGLFDKLKNLQVLNLEHNPITT IALNAFTPIPTAHIYVGKLFKAAKNADWARSTNATICEEEYIYGVCIYCK RDEYLDHFADSENCNKPNPKAKDVLAKKAYENQLKAMPTHSWKKAKEYPV EEEQP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5888-PB | 455 | CG5888-PB | 1..455 | 1..455 | 2396 | 100 | Plus |
CG5888-PA | 455 | CG5888-PA | 1..455 | 1..455 | 2396 | 100 | Plus |
Tl-PD | 1097 | CG5490-PD | 42..434 | 41..356 | 184 | 23.1 | Plus |
Tl-PB | 1097 | CG5490-PB | 42..434 | 41..356 | 184 | 23.1 | Plus |
Tl-PC | 1117 | CG5490-PC | 42..434 | 41..356 | 184 | 23.1 | Plus |