BDGP Sequence Production Resources |
Search the DGRC for GH08385
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 83 |
Well: | 85 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5498-RB |
Protein status: | GH08385.pep: gold |
Preliminary Size: | 1508 |
Sequenced Size: | 1536 |
Gene | Date | Evidence |
---|---|---|
CG5498 | 2000-02-14 | Blastp of sequenced clone |
CG5498 | 2001-01-01 | Release 2 assignment |
CG5498 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5498 | 2008-04-29 | Release 5.5 accounting |
CG5498 | 2008-08-15 | Release 5.9 accounting |
CG5498 | 2008-12-18 | 5.12 accounting |
1536 bp (1536 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145648
> GH08385.complete GTTCGACATAAACACACAATCACAAAAGACGCGCAATTTTTATGATCCGG ATTAAATTCTTGTTTTAAATATGGGCCTTGGAAGCGGTGACAGGGTAAAT GAAACCGACCACTTCAGCTTTCCCGCAAGCTGGCAGGACAACGGTAGAAT GCAGGTGCAGTTCGCCATGTTTCGATCGAGGCATCTGGATGCGGAGGGCT ACGACGCAAAAATGAATTTCTGGATGGATTTAATTGCAAAATATCTAAAG TTCAGCGGACGACCAATCTTCAGCCTGCGGGATCTGCAACTGCTGTTCAT GAGGGGTGACCAACTGCCCGCCTGCCTGGACACCGTGATATCCGAGATGC AGCAGAGGAAGCAGATCCGCTCTCGCAGTGAATTTGAGTACGATCCGGCC AATTCCTGGGGTGGTTGGCTCGTCAACAGCCTGGTAAAGCGCCCCCTTTC ATGGAGCTGGTCGAAAATCAAGCACAGCGTGGTGACGGAGGACCTGGAAG CCTCCGCTTTAATTGAATGGATTCACCTAGATGCCTTAAACAACACTTGC GATCTCATCGCCGAAAAAGTCCTGTCGGAAAACACTGGAAAACTACTGCA CTTTAATGCTTTGAAAACGCTTTGTAAGACTCACGGAGTTCCCACTTACT CAGACAAAGATCTATGCGCTTGCCTGTTGGCCTTAAATGTTCGTCAAATC TTGGGCCTAGAATTTAAAGTAGAAAAAGGCATACGCCAAATTCACTTGAT CAAAATACCAAAAAAACCTGGCGACGATCTTAATATAAGCCAAGAAGACC AGGCCGTCCACAATCTTCAGAATACCCAAGCTCAGTTACTCAAGCAGTTG GAGGACCTAGAGGAGGAGATCAAGGTGAACGATGACAAAGTGCGCCAGTA CATGAAGGAGAACAAACGGCAAATGGCAAAAACCTATCTACGAAAAAGGC ATCTCCTGGAAAAGAATCATGAACGTCGCAGTCTTGCCCTGCACAACATC GAATCTCTTCTGTCCAGTGTGGATGAGGCCCAGAACAGTGGCGTTGTTCT GGATGCCTACAAGATCGGATCAAATACCTTGAAGAAGGTTCTCTCGAATT CTGGATTGAAGTACGACAATGTCGACGAAGTATTGGCCGATGTGCGGGAC ACGCTCGACCAGCATCGGGAAGTTCAGGACATAATGTCCAATAGCGTTGT GGAGAACGCGAGCCAGGAAGATGATCAACTTGAGCAGGAATTGCGTGAAC TGGCTGGAGAATCTGCGCCGGCTACGTTTAGTCCACATATTAATAACAAC CTAAGGGCGGAGGTTGTGATTACGGACGAGGAGATGATTGCCATGCTGCA GGATCTTGAGGTGGAGGATGGTACTGTATCGCAATCCAGTGTAAAATCCG TGAAAACTGCGATATAAATGTTGTGTTTTTTTAAATGGCATGTGAACTGT TATAATTCTAAATTTATTACATTGTAAAATGCGTTTTTATTACAAGGAAG AAACGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5498-RB | 1665 | CG5498-RB | 54..1560 | 2..1508 | 7535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20372612..20373151 | 541..2 | 2700 | 100 | Minus |
chr3L | 24539361 | chr3L | 20371464..20372000 | 1507..971 | 2685 | 100 | Minus |
chr3L | 24539361 | chr3L | 20372340..20372559 | 761..542 | 1100 | 100 | Minus |
chr3L | 24539361 | chr3L | 20372069..20372278 | 971..762 | 1050 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20383553..20384092 | 541..2 | 2700 | 100 | Minus |
3L | 28110227 | 3L | 20382404..20382941 | 1508..971 | 2690 | 100 | Minus |
3L | 28110227 | 3L | 20383281..20383500 | 761..542 | 1100 | 100 | Minus |
3L | 28110227 | 3L | 20383010..20383219 | 971..762 | 1050 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20376653..20377192 | 541..2 | 2700 | 100 | Minus |
3L | 28103327 | 3L | 20375504..20376041 | 1508..971 | 2690 | 100 | Minus |
3L | 28103327 | 3L | 20376381..20376600 | 761..542 | 1100 | 100 | Minus |
3L | 28103327 | 3L | 20376110..20376319 | 971..762 | 1050 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20372069..20372278 | 762..971 | 100 | <- | Minus |
chr3L | 20371464..20371999 | 972..1507 | 100 | <- | Minus |
chr3L | 20372340..20372559 | 542..761 | 100 | <- | Minus |
chr3L | 20372612..20373151 | 1..541 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5498-RB | 1..1347 | 71..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5498-RB | 1..1347 | 71..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5498-RB | 1..1347 | 71..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5498-RB | 1..1347 | 71..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5498-RB | 1..1347 | 71..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5498-RB | 1..1508 | 1..1507 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5498-RB | 1..1508 | 1..1507 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5498-RB | 16..1523 | 1..1507 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5498-RB | 1..1508 | 1..1507 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5498-RB | 16..1523 | 1..1507 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20382405..20382940 | 972..1507 | 100 | <- | Minus |
3L | 20383010..20383219 | 762..971 | 100 | <- | Minus |
3L | 20383281..20383500 | 542..761 | 100 | <- | Minus |
3L | 20383553..20384092 | 1..541 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20382405..20382940 | 972..1507 | 100 | <- | Minus |
3L | 20383010..20383219 | 762..971 | 100 | <- | Minus |
3L | 20383281..20383500 | 542..761 | 100 | <- | Minus |
3L | 20383553..20384092 | 1..541 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20382405..20382940 | 972..1507 | 100 | <- | Minus |
3L | 20383010..20383219 | 762..971 | 100 | <- | Minus |
3L | 20383281..20383500 | 542..761 | 100 | <- | Minus |
3L | 20383553..20384092 | 1..541 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20375505..20376040 | 972..1507 | 100 | <- | Minus |
arm_3L | 20376110..20376319 | 762..971 | 100 | <- | Minus |
arm_3L | 20376381..20376600 | 542..761 | 100 | <- | Minus |
arm_3L | 20376653..20377192 | 1..541 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20375505..20376040 | 972..1507 | 100 | <- | Minus |
3L | 20376110..20376319 | 762..971 | 100 | <- | Minus |
3L | 20376381..20376600 | 542..761 | 100 | <- | Minus |
3L | 20376653..20377192 | 1..541 | 99 | Minus |
Translation from 70 to 1416
> GH08385.pep MGLGSGDRVNETDHFSFPASWQDNGRMQVQFAMFRSRHLDAEGYDAKMNF WMDLIAKYLKFSGRPIFSLRDLQLLFMRGDQLPACLDTVISEMQQRKQIR SRSEFEYDPANSWGGWLVNSLVKRPLSWSWSKIKHSVVTEDLEASALIEW IHLDALNNTCDLIAEKVLSENTGKLLHFNALKTLCKTHGVPTYSDKDLCA CLLALNVRQILGLEFKVEKGIRQIHLIKIPKKPGDDLNISQEDQAVHNLQ NTQAQLLKQLEDLEEEIKVNDDKVRQYMKENKRQMAKTYLRKRHLLEKNH ERRSLALHNIESLLSSVDEAQNSGVVLDAYKIGSNTLKKVLSNSGLKYDN VDEVLADVRDTLDQHREVQDIMSNSVVENASQEDDQLEQELRELAGESAP ATFSPHINNNLRAEVVITDEEMIAMLQDLEVEDGTVSQSSVKSVKTAI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24143-PA | 447 | GF24143-PA | 1..447 | 1..447 | 1768 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13321-PA | 449 | GG13321-PA | 1..444 | 1..445 | 2111 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14595-PA | 400 | GH14595-PA | 1..400 | 48..447 | 1201 | 57.9 | Plus |
Dgri\GH19872-PA | 228 | GH19872-PA | 20..171 | 244..398 | 150 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5498-PB | 448 | CG5498-PB | 1..448 | 1..448 | 2297 | 100 | Plus |
shrb-PA | 226 | CG8055-PA | 20..171 | 244..398 | 177 | 31 | Plus |
Vps20-PC | 212 | CG4071-PC | 17..180 | 239..400 | 156 | 25.9 | Plus |
Vps20-PA | 212 | CG4071-PA | 17..180 | 239..400 | 156 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13480-PA | 450 | GI13480-PA | 12..449 | 10..446 | 1322 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11913-PA | 447 | GL11913-PA | 3..441 | 8..447 | 1521 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18929-PA | 444 | GA18929-PA | 3..439 | 8..445 | 1509 | 65.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22224-PA | 447 | GM22224-PA | 1..447 | 1..448 | 2216 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12196-PA | 448 | GD12196-PA | 1..448 | 1..448 | 2242 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11842-PA | 447 | GJ11842-PA | 15..446 | 15..446 | 1372 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17229-PA | 452 | GK17229-PA | 13..446 | 15..442 | 1285 | 59.2 | Plus |
Translation from 70 to 1416
> GH08385.hyp MGLGSGDRVNETDHFSFPASWQDNGRMQVQFAMFRSRHLDAEGYDAKMNF WMDLIAKYLKFSGRPIFSLRDLQLLFMRGDQLPACLDTVISEMQQRKQIR SRSEFEYDPANSWGGWLVNSLVKRPLSWSWSKIKHSVVTEDLEASALIEW IHLDALNNTCDLIAEKVLSENTGKLLHFNALKTLCKTHGVPTYSDKDLCA CLLALNVRQILGLEFKVEKGIRQIHLIKIPKKPGDDLNISQEDQAVHNLQ NTQAQLLKQLEDLEEEIKVNDDKVRQYMKENKRQMAKTYLRKRHLLEKNH ERRSLALHNIESLLSSVDEAQNSGVVLDAYKIGSNTLKKVLSNSGLKYDN VDEVLADVRDTLDQHREVQDIMSNSVVENASQEDDQLEQELRELAGESAP ATFSPHINNNLRAEVVITDEEMIAMLQDLEVEDGTVSQSSVKSVKTAI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5498-PB | 448 | CG5498-PB | 1..448 | 1..448 | 2297 | 100 | Plus |
shrb-PA | 226 | CG8055-PA | 20..171 | 244..398 | 177 | 31 | Plus |
Vps20-PC | 212 | CG4071-PC | 17..180 | 239..400 | 156 | 25.9 | Plus |
Vps20-PA | 212 | CG4071-PA | 17..180 | 239..400 | 156 | 25.9 | Plus |