BDGP Sequence Production Resources |
Search the DGRC for GH08387
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 83 |
Well: | 87 |
Vector: | pOT2 |
Associated Gene/Transcript | SpdS-RB |
Protein status: | GH08387.pep: gold |
Preliminary Size: | 1569 |
Sequenced Size: | 1471 |
Gene | Date | Evidence |
---|---|---|
CG8327 | 2001-01-01 | Release 2 assignment |
CG8327 | 2001-07-04 | Blastp of sequenced clone |
CG8327 | 2003-01-01 | Sim4 clustering to Release 3 |
SpdS | 2008-04-29 | Release 5.5 accounting |
1471 bp (1471 high quality bases) assembled on 2001-07-04
GenBank Submission: AY059440
> GH08387.complete CGGATGGTTCAGCGAACTGCAGGCCGATCTCTGGCCCGGTCAGTCATTCT CCCTGAAAGTCAAGGAGGTCATCCACAAGGAGAAGTCCCGGTTCCAAGAC ATCCAGATCGTTGAAACGTAAGATAAATAATAGATAAACAAATACTTGGA CACACAACCCCATTTGTTTACATCCGAAATTCCTCAGTCTAGACTGAAGT TTGAAGATAGATGTCAAAATAAATTAGCTTAGATTGAGATTAAAAAACTA AATTAAAATCATTATAAACACGCAAGTCACACAAATCCGAAATTTTTAAC AGCTTAAGCTGTTGAGATTTTAAGGACTAACCTACAATAGCCTAATCCCA TATGTATCCTACATTGAAGGTCCCTAAATCATAGATTGTAGAAATCGAAA ATTTTCCACTGGTTGTTCAAACACAAATTGCCCAGCCAGCATTTTCGGAC CCTTTGGTTTTCGTGTGTTTATTCTTGATCTGCACCAACAGCCTTATCGA TGGAGTCATCTAGGGCCAAAAACGACAGACAGAATACTGATAGCAAGTCA GCTCGTCTTTCAGGTTTGAGTTCCTCCAGTCGAACATTGGGTACACTTGC GCCGCTGAAAAAATCAATAATTCGATAATTCTATTACAGCGAAACCTATG GACGGTGCCTAATTCTGGACGGAATCATTCAGTGCACGGCCAGGGATGAG TTCTCGTACCAGGAGATGATATCTTTCCTGCCGCTCTGCGCCCATCCCAA TCCCAAAAAGGTCCTGATCGTGGGCGGTGGCGATGGCGGCGTTGCTCGCG AGGTGGTAAAGCATCCACTGGTCGAGGAAGTGCATCAGGTGGAAATCGAC GACCGTGTCGTCGAGCTGTCCAAGCAATATCTCCCAGCGATGGCCTGTGG TTTCGCCAACGAGAAGTTGAAGCTTACCATTGGCGATGGATTCGACTATA TGAAGAAACACAAGAACGAATTTGATGTCATCATCACCGACAGCTCGGAT CCCATTGGTCCGGCAGTGAGCCTGTTTCAGGAAAGCTACTACGAGCTAAT GAAACACGCGCTGAAGGATGACGGAATCGTGTGCTCCCAGGGCGGTAGCT TCTGGCTGGACCTGGACTACATCAAGAAGACCATGTCCGGCTGCAAGGAG CACTTTGCTAAGGTGGCCTATGCCGTCACCTCCGTTCCGTCCTATCCCTG CGGCCACATTGGCTTCGTCATGGGCTCCCTGAACAAAAACCAGGACTTCG CTACTCCCAAGCTTGGAAAGTCCGAAATCGATTCTATAGACCTAAGGTAC TACTCCTCCGAGGTTCACTCCGCCGCCTTTGCCTTGCCTCGATGGGTGCA GAAGCACTTTTACGAATGACCAGGTTGCGGAAAGATTCGTGTGTATCTGT TTGTTAAAAATAAATATGATAATAATATGACTTGTTTATCATCGCTTCTT AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SpdS.a | 1450 | SpdS.a | 1..1450 | 1..1450 | 7250 | 100 | Plus |
SpdS.b | 1889 | SpdS.b | 590..1406 | 637..1453 | 4085 | 100 | Plus |
SpdS-RB | 1707 | SpdS-RB | 408..1224 | 637..1453 | 4085 | 100 | Plus |
SpdS.b | 1889 | SpdS.b | 217..592 | 188..563 | 1880 | 100 | Plus |
SpdS-RB | 1707 | SpdS-RB | 217..410 | 370..563 | 970 | 100 | Plus |
SpdS-RB | 1707 | SpdS-RB | 100..218 | 1..119 | 595 | 100 | Plus |
SpdS.b | 1889 | SpdS.b | 100..216 | 1..117 | 585 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5457552..5459001 | 1..1450 | 7235 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 9631738..9633190 | 1..1453 | 7265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9372569..9374021 | 1..1453 | 7265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\mini-me | 4622 | Dpse\mini-me DPSEMINIME 4622bp | 83..151 | 443..511 | 147 | 68.1 | Plus |
Dfun\Isfun-1 | 928 | Dfun\Isfun-1 DFU309320 928bp Derived from AJ309320 (Rel. 68, Last updated, Version 1). | 82..130 | 463..511 | 137 | 75.5 | Plus |
Damb\P-element_T | 3329 | Damb\P-element_T P_T 3329bp Derived from AF012414. | 3077..3169 | 511..415 | 134 | 61.9 | Minus |
Dsub\SGM | 823 | Dsub\SGM SGM 823bp Derived from AF043638. | 101..149 | 463..511 | 128 | 73.5 | Plus |
INE-1 | 611 | INE-1 INE1 611bp Derived from U66884 (e1371475) (Rel. 52, Last updated, Version 6). | 81..126 | 466..511 | 113 | 71.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5457552..5459001 | 1..1450 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SpdS-RA | 135..864 | 640..1369 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SpdS-RA | 135..864 | 640..1369 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SpdS-RA | 135..864 | 640..1369 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SpdS-RA | 135..864 | 640..1369 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SpdS-RA | 135..864 | 640..1369 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SpdS-RB | 190..382 | 364..555 | 98 | == | Plus |
SpdS-RB | 383..1201 | 630..1450 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SpdS-RB | 210..402 | 364..555 | 98 | == | Plus |
SpdS-RB | 403..1221 | 630..1450 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SpdS-RB | 178..370 | 364..555 | 98 | == | Plus |
SpdS-RB | 371..1189 | 630..1450 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SpdS-RB | 190..382 | 364..555 | 98 | == | Plus |
SpdS-RB | 383..1201 | 630..1450 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SpdS-RB | 178..370 | 364..555 | 98 | == | Plus |
SpdS-RB | 371..1189 | 630..1450 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9631738..9633187 | 1..1450 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9631738..9633187 | 1..1450 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9631738..9633187 | 1..1450 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5457460..5458909 | 1..1450 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9372569..9374018 | 1..1450 | 100 | Plus |
Translation from 715 to 1368
> GH08387.hyp MISFLPLCAHPNPKKVLIVGGGDGGVAREVVKHPLVEEVHQVEIDDRVVE LSKQYLPAMACGFANEKLKLTIGDGFDYMKKHKNEFDVIITDSSDPIGPA VSLFQESYYELMKHALKDDGIVCSQGGSFWLDLDYIKKTMSGCKEHFAKV AYAVTSVPSYPCGHIGFVMGSLNKNQDFATPKLGKSEIDSIDLRYYSSEV HSAAFALPRWVQKHFYE*
Translation from 715 to 1368
> GH08387.pep MISFLPLCAHPNPKKVLIVGGGDGGVAREVVKHPLVEEVHQVEIDDRVVE LSKQYLPAMACGFANEKLKLTIGDGFDYMKKHKNEFDVIITDSSDPIGPA VSLFQESYYELMKHALKDDGIVCSQGGSFWLDLDYIKKTMSGCKEHFAKV AYAVTSVPSYPCGHIGFVMGSLNKNQDFATPKLGKSEIDSIDLRYYSSEV HSAAFALPRWVQKHFYE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16181-PA | 287 | GF16181-PA | 71..286 | 1..216 | 1111 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16982-PA | 287 | GG16982-PA | 71..287 | 1..217 | 1144 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18040-PA | 289 | GH18040-PA | 71..289 | 1..217 | 948 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SpdS-PB | 217 | CG8327-PB | 1..217 | 1..217 | 1155 | 100 | Plus |
SpdS-PC | 287 | CG8327-PC | 71..287 | 1..217 | 1155 | 100 | Plus |
SpdS-PA | 287 | CG8327-PA | 71..287 | 1..217 | 1155 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23961-PA | 289 | GI23961-PA | 71..289 | 1..217 | 937 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21885-PA | 197 | GL21885-PA | 71..195 | 1..125 | 600 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20990-PA | 292 | GA20990-PA | 71..285 | 1..213 | 966 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23823-PA | 287 | GM23823-PA | 71..287 | 1..217 | 1144 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18634-PA | 279 | GD18634-PA | 71..279 | 1..217 | 950 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11148-PA | 304 | GJ11148-PA | 83..299 | 1..215 | 906 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10845-PA | 289 | GK10845-PA | 71..289 | 1..217 | 1005 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25970-PA | 287 | GE25970-PA | 71..287 | 1..217 | 1151 | 98.6 | Plus |