BDGP Sequence Production Resources |
Search the DGRC for GH08388
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 83 |
Well: | 88 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3149-RA |
Protein status: | GH08388.pep: gold |
Preliminary Size: | 2050 |
Sequenced Size: | 2021 |
Gene | Date | Evidence |
---|---|---|
CG3149 | 2000-02-14 | Blastp of sequenced clone |
CG3149 | 2001-01-01 | Release 2 assignment |
CG3149 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3149 | 2008-04-29 | Release 5.5 accounting |
CG3149 | 2008-08-15 | Release 5.9 accounting |
CG3149 | 2008-12-18 | 5.12 accounting |
2021 bp (2021 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145649
> GH08388.complete AGAGAACATTTTGAGTTGTTTTGCCCAACAAATTGGGCTGTGTTTTTAAC TGATTTTGCCATTCGGACGCGGTGGCATCTTGAGACTGCTTGGAGGAGCC CGACCAACGGGGTCAGATGGCGCGCAATGTGCTCGAGAGCAGCCTGCTGG GCGCCGGCTTCAGCATCATCTTTCAGATACTGTGCCGCATCCTCACTTTC GGCATCAACGCGTACATCGTGCGACATGTGGGCCGCGAGGTGTTGGGCAT TATGAATGTCCGACTGCTGCTTCTGGAGAGCACCCTGCTCTTCCTCTCCC GCGAGGCCATCAACCGGGCGGCCCTGAGCGCCAATGCCCAGCAGGGCGAT CGCTGCTCCTGGGCGCAGCTGATCAACCAGATGTGGCTCACGGTTCCCAT TTGCGCTGTTTTGTGTGCTCCTTGCCTATACATTTGGCTAAACTGGCTGT CGGCGGTGGACGCCATCTACGCCTCGCAATACGAGTTCGCCTGCTATGCC GTGGCCTTTTCCTGCGTCCTGGAATTGATGGCCGAGTCCGCGGTGTTTGT CGCCCAGGTCTTTTGCTTTGTCAAGCTTAAGATCCTGCTGAATACGCTGC ACATCCTGGTGCGCTCGGCCATCTTCCTGTGGATTGTCACCGGTGATCGC AGTGCGGCAATCAATGCATTTGCGATTGCCCAACTATCCAGCGCAGTGAC CATTGTCCTGGGCCAATATGGCTTCTTTTACTTCTATCTGAAGGGCTTCA AGGATTTCGTGACCCAGCAGGCGAAAAAGAAACCAGTGGCTCCAAAAGCC TGGCAGGTCTCACTGTACGAGCACATGGATGACTTCCCCTTCAAGCAGCT GAGCGACTTCCTGCCCGGCGTGATGTTCAATCCAAATGGAAAGCATTTCA ACCGGGAACTGCAAACGCTAACCCTCAGCTTTGTGAAGCAGGGCGTGCTG AAGCAAATCCTCACCGAGGGCGAGAAGTACGTGATGTCCGTGTCGCCGGT GCTGAGCTTCGGGGAGCAGGCCACCTACGATGTGGTCAACAATTTGGGCA GCATGGCGGCCCGCTTCATCTTCCGACCCATCGAGGACAGTTCGTACTTT TACTTCACGCAGACGCTATCCCGGGACATCAAGCTGGCCAAGCAGCCGCA GGAGCGCGTCCGTCAGGCGAGCAGTGTCCTGAATAATCTGCTCTTGGGTG TGAGCTCCATTGGCCTGATCGCCTTCACCTTTGGACAGAGCTACTCGTAC CCAGTGCTGCTGCTTTACGGCGGTCCTGATTTCGTGGCTGGCGGATTGCC GCAGAGCCTCTTGCAGTGGCACTGCCTTGCGATCTATCTGCTGGCGGTGA ACGGGATCAGCGAGGGCTATATGTTCGCCACGAACACAAGTCGAGATATC GACAAGTACAACTATCTGATGGCCATCTTTTCGGTCAGCTTCCTGGTGCT CTCCTACATTTTGACGGGGATCTTTGGTCCGGTGGGCTTCATCTTCGCCA ACTGCATTAATATGCTGAGCAGGATTCTGTACAGCACCTACTACATCAGG CATCAGTATCGGCCCCTGTCGCTGGATCCGTTGCTGGGCCTCTGGCCGGG AAAACTCTTTGGATGCACGCTCTTCCTGGCCGGCATCGTCTGTTATTGGT ACCAAAGTTCTGACCTTGCCACACATCTGGGCGTGGGTGTCCTGGCTGGG CTCGCCTGCCTTCTGTCCTGGGCGTTGGCTCATCGAGATCTGGTGCGACT GGCCTGGCGATATGGTCGCCGCATCAAGATCGAATAGGGACCATGCTGTT GGAATTGTTATCCTCGCTTCCCTCGCACCGATGAACCGCAATGAAACGCA CAGTTTGAGTAATAATGGCATATTTATACATAGTTGACATTTGTAAATTA ATTCCAAAATTAAGTTATGTACTTATTGAGTGTTTGTAGAGCCTTGATTG CTTATTTAACCTTAAGACATGCATTAAAAGACAACGATTACTGTTTAAAA AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 5585769..5587030 | 1649..388 | 6235 | 99.6 | Minus |
chrX | 22417052 | chrX | 5585353..5585700 | 1996..1649 | 1740 | 100 | Minus |
chrX | 22417052 | chrX | 5587099..5587316 | 392..175 | 1090 | 100 | Minus |
chrX | 22417052 | chrX | 5587414..5587589 | 176..1 | 880 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 5693361..5694622 | 1649..388 | 6295 | 99.9 | Minus |
X | 23542271 | X | 5692944..5693292 | 1997..1649 | 1745 | 100 | Minus |
X | 23542271 | X | 5694691..5694908 | 392..175 | 1090 | 100 | Minus |
X | 23542271 | X | 5695006..5695181 | 176..1 | 880 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 5701459..5702720 | 1649..388 | 6295 | 99.9 | Minus |
X | 23527363 | X | 5701042..5701390 | 1997..1649 | 1745 | 100 | Minus |
X | 23527363 | X | 5702789..5703006 | 392..175 | 1090 | 100 | Minus |
X | 23527363 | X | 5703104..5703279 | 176..1 | 880 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 5585353..5585699 | 1650..1996 | 100 | <- | Minus |
chrX | 5585769..5587026 | 392..1649 | 99 | <- | Minus |
chrX | 5587100..5587314 | 177..391 | 100 | <- | Minus |
chrX | 5587414..5587589 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3149-RA | 1..1671 | 117..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3149-RA | 1..1671 | 117..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3149-RA | 1..1671 | 117..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3149-RA | 1..1671 | 117..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3149-RA | 1..1671 | 117..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3149-RA | 26..2021 | 1..1996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3149-RA | 26..2021 | 1..1996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3149-RA | 25..2020 | 1..1996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3149-RA | 26..2021 | 1..1996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3149-RA | 25..2020 | 1..1996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5695006..5695181 | 1..176 | 100 | Minus | |
X | 5692945..5693291 | 1650..1996 | 100 | <- | Minus |
X | 5693361..5694618 | 392..1649 | 100 | <- | Minus |
X | 5694692..5694906 | 177..391 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5695006..5695181 | 1..176 | 100 | Minus | |
X | 5692945..5693291 | 1650..1996 | 100 | <- | Minus |
X | 5693361..5694618 | 392..1649 | 100 | <- | Minus |
X | 5694692..5694906 | 177..391 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5695006..5695181 | 1..176 | 100 | Minus | |
X | 5692945..5693291 | 1650..1996 | 100 | <- | Minus |
X | 5693361..5694618 | 392..1649 | 100 | <- | Minus |
X | 5694692..5694906 | 177..391 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 5586978..5587324 | 1650..1996 | 100 | <- | Minus |
arm_X | 5587394..5588651 | 392..1649 | 100 | <- | Minus |
arm_X | 5588725..5588939 | 177..391 | 100 | <- | Minus |
arm_X | 5589039..5589214 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5703104..5703279 | 1..176 | 100 | Minus | |
X | 5701043..5701389 | 1650..1996 | 100 | <- | Minus |
X | 5701459..5702716 | 392..1649 | 100 | <- | Minus |
X | 5702790..5703004 | 177..391 | 100 | <- | Minus |
Translation from 116 to 1786
> GH08388.hyp MARNVLESSLLGAGFSIIFQILCRILTFGINAYIVRHVGREVLGIMNVRL LLLESTLLFLSREAINRAALSANAQQGDRCSWAQLINQMWLTVPICAVLC APCLYIWLNWLSAVDAIYASQYEFACYAVAFSCVLELMAESAVFVAQVFC FVKLKILLNTLHILVRSAIFLWIVTGDRSAAINAFAIAQLSSAVTIVLGQ YGFFYFYLKGFKDFVTQQAKKKPVAPKAWQVSLYEHMDDFPFKQLSDFLP GVMFNPNGKHFNRELQTLTLSFVKQGVLKQILTEGEKYVMSVSPVLSFGE QATYDVVNNLGSMAARFIFRPIEDSSYFYFTQTLSRDIKLAKQPQERVRQ ASSVLNNLLLGVSSIGLIAFTFGQSYSYPVLLLYGGPDFVAGGLPQSLLQ WHCLAIYLLAVNGISEGYMFATNTSRDIDKYNYLMAIFSVSFLVLSYILT GIFGPVGFIFANCINMLSRILYSTYYIRHQYRPLSLDPLLGLWPGKLFGC TLFLAGIVCYWYQSSDLATHLGVGVLAGLACLLSWALAHRDLVRLAWRYG RRIKIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3149-PA | 556 | CG3149-PA | 1..556 | 1..556 | 2871 | 100 | Plus |
Translation from 116 to 1786
> GH08388.pep MARNVLESSLLGAGFSIIFQILCRILTFGINAYIVRHVGREVLGIMNVRL LLLESTLLFLSREAINRAALSANAQQGDRCSWAQLINQMWLTVPICAVLC APCLYIWLNWLSAVDAIYASQYEFACYAVAFSCVLELMAESAVFVAQVFC FVKLKILLNTLHILVRSAIFLWIVTGDRSAAINAFAIAQLSSAVTIVLGQ YGFFYFYLKGFKDFVTQQAKKKPVAPKAWQVSLYEHMDDFPFKQLSDFLP GVMFNPNGKHFNRELQTLTLSFVKQGVLKQILTEGEKYVMSVSPVLSFGE QATYDVVNNLGSMAARFIFRPIEDSSYFYFTQTLSRDIKLAKQPQERVRQ ASSVLNNLLLGVSSIGLIAFTFGQSYSYPVLLLYGGPDFVAGGLPQSLLQ WHCLAIYLLAVNGISEGYMFATNTSRDIDKYNYLMAIFSVSFLVLSYILT GIFGPVGFIFANCINMLSRILYSTYYIRHQYRPLSLDPLLGLWPGKLFGC TLFLAGIVCYWYQSSDLATHLGVGVLAGLACLLSWALAHRDLVRLAWRYG RRIKIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22446-PA | 556 | GF22446-PA | 1..556 | 1..556 | 2634 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18478-PA | 556 | GG18478-PA | 1..556 | 1..556 | 2912 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12413-PA | 562 | GH12413-PA | 1..562 | 1..556 | 2342 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3149-PA | 556 | CG3149-PA | 1..556 | 1..556 | 2871 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15868-PA | 560 | GI15868-PA | 1..560 | 1..556 | 2394 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19911-PA | 356 | GL19911-PA | 1..356 | 201..556 | 1645 | 84.8 | Plus |
Dper\GL19910-PA | 174 | GL19910-PA | 1..159 | 1..159 | 705 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16280-PA | 556 | GA16280-PA | 1..556 | 1..556 | 2544 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12626-PA | 556 | GM12626-PA | 1..556 | 1..556 | 2920 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16242-PA | 556 | GD16242-PA | 1..556 | 1..556 | 2933 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19026-PA | 561 | GJ19026-PA | 1..561 | 1..556 | 2318 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25490-PA | 565 | GK25490-PA | 1..565 | 1..556 | 2384 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16795-PA | 556 | GE16795-PA | 1..556 | 1..556 | 2893 | 98.2 | Plus |