BDGP Sequence Production Resources |
Search the DGRC for GH08391
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 83 |
Well: | 91 |
Vector: | pOT2 |
Associated Gene/Transcript | CNT1-RB |
Protein status: | GH08391.pep: gold |
Sequenced Size: | 2795 |
Gene | Date | Evidence |
---|---|---|
CG11778 | 2007-09-25 | DGC5 pick |
CG11778 | 2008-04-29 | Picked prior to 5.5 |
CG11778 | 2008-08-15 | Release 5.9 accounting |
CG11778 | 2008-12-18 | 5.12 accounting |
2795 bp assembled on 2008-05-22
GenBank Submission: BT032887
> GH08391.complete CTGTTTCTCATTTATACACACAATGGCAGAACCAATAGAAGGCGAACAGG AGGAAAAGCCTCCGCCATCGAGGGCAAAGCGAATCACCTATCTGGTACTC CATGTGCTGCTCCATATCATATTCATATCTTACTTTACGGCAGCCACAAT CATTTTCATCTTTTACGACAAGGATTCCAAAGAATGCTGGCCCAATAGGG GCTCGGAAGCCACAACCGAATCGATAGATAACTCAACCGAAGATGATGAT GATGATGATTATGACACAGAAGAAACTTCTGAGAAGCCAGTGCCAGAGGT TAAGCCAAAACTATTGTGCCAAATTAACTGGTGTCATGGATACGGGTTTC TCATCGTCTTGTTCATCTTGTTTTATATCCTATGGCTGTACTACTGGGTA TTTAAGCCATTCGTGGGCATCAAGCTGTATAATAACTACCTGGAACCAGT GATTGACAAATGGATTGCGTTTAGTCGCCAGTGGATAGTGTCCGGCGTAA TGCTGGCGATTGTGCTCGCTGTGGTGGTGGCATACCTCGGATTCGAGTGC CGCAATGACGCATACAAGGCCATCGGACTGCTCGGACCTGTGTGCTTTGT CCTTATCGGATTCGCCGTGTCCAAGCACCACTTGCAAGTACCTTGGCGCA TAGTGACCCACGGTCTCCTGGGACAGCTGCTGCTGGGCATACTCTGCCTG CGCCTCCCCTTTGGCCGGTCCATCTTTCAATGCCTTGGGGACAAGGTGAC GATATTTCTGAACTACGCACAGCACGGAGCACGCTTTGTGTACGGGGATC GCATTTGCGATGAGTACGTCTTTGCATTTGCCATACTGGCGGTGGTGTTC TTCTTCAGCGTGATCACCAGCATTATGTATTACCTTGGCTGGATGCAGTT CATCCTGAACGGTTTTGGGTTCCTCTTGCAGGCCATGGTGGGCACCACCG TTTGCGAAAGTGTAAATGCAGCGGGCAACGTGTTTCTAAGCATGACCGAG AGCCCTCTGGTCATCCGGCCGTACATCGAAATACTGACCGTCAGCGAGTT GCACGCTATATGCACCTCCGGCTACGCGACAGTGGCCGGTACTGTCTTGG GGGCTTATGTGTCCTTCGGTGCTTCCGCCAGCTTTCTTATCGCAGCCAGC GTAATGGCTGCTCCGGGTTCACTGGCTTTCGCCAAACTGTTCTACCCCGA GACCGAGGAATCTCTGACCAGGTCCGACAACATTAAGCTGGAAAGCTCGA CGGATACGTCTATTTTGGATGCGGCCGCCTCGGGAGCTGCAGCAGCCTTG TTGATTGTGCTCGGAATCGTCTCGAATATCATCGCCTTCCTAGCCATTGT GTTCTTCCTAGACGCTGTAACGGAGTGGATTTTCGAGCTAATTGGACTGC ATAACATCACCCTACTCTACATTCTCTCCCAGATCTTTATCCCGATTGTC TTCGTGATGGGCGTGCCGTGGCACGATTGTCAAGCAATTGGCCTGGTGGT GGCCCAAAAGTCGTTCATAAACGAGTTTGTGGCTTATAGAAACCTGGGCA TATTGGTTAGCGATAAAAAGGTTGATCCGCGGAGCGCTGCCATAGCCACT TTTGCCCTTTGTGGGTTTGCCAATCCCGGATCCCTGGGCATTGTCATCGC TTCGCTGAGTGCAATGGCACCATCCCGACGATCAGACATCACCAGGGTAG CCTTTCGATCCTATTTCGCAGGCAGTTTCGTTAGCTTTACATCCGCTTCG CTTGCAGGGATTCTTATTCAAAATGAGTACACAGGTGGTAATTAATTGAT TTAGGTAAGTGAACGATACGAAAAGCATAGAGCAGGGAGCTAGGGTACAA TTCCACTCAAATTGGCCATTACCTTCTTGAGCAATTCCCAGTCGGCAGCA TCGAAATTCGCGGTGCACTGGGTCAGTTGAAGAGAAGCCTCATATATATT ACGAAGGATTTCTTTAGGCGCCAATTCACTCCGTCGACGTTTTAGACTAG AGACCGGACATTTATGATCTCCATGGCGAATGTAGCTTGATTTACTGAGA TCAAATGAACCGTCGACAACAGTTCCGGGTTCGACATGCAATGCCTTAAA CAATGGGTATATTGCATGGCGGGCACTAAATGCTCTTAGTTGGGCGTCAT CGCTGACTTTGCAGGAGTCGAGGAATTTCTCGCGATACCAGTTTGTGCAT CCAGCATTTGGAGGCAGTCCCCTAAGTATAAGTAATTTGGTGGATCCATT CGCACGCGCTAGTAGTTTGAAGTAAACATTAGCAAAGCTAATGCTCTTGT CAATGCCTAAAAGTTTATTGGCCATTTCCGATGTCCGCTGAAACCAATGG GAACAGTCGATTTGATCGTGGTGCACCAAAAGTTCCAGTAGAGCAACCTT TGGGTATAAAAAATCAAGTACAACTCAACTTTTGTGGGCGCTGAGGTGGA GATGAGTTCTAAGCGCTTCAATATCTTCATTCCCACGTGGCCATCTGATT TTGCGACGACAGACAGGTGCCGGAAGTTTTGAATGCTTATGACAGGAAGT TCCTGCTTTCCCAAGCAGTGGAAGTACCTAAGGAATCGTTGTACATGCAA TTGGCTTGGATTTGTGGAAAACATGGCGTAAGAATTATTGCACTTATGCC AGTGAGCCATAGCCTCTTTTATGGCATGATCTGTCCAGCATTTGTTGGCC TCTTTTAGCCTAAAAACATAGAATAGTGAAATAAATTTTAAAATGTATGA TTTATAATTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11778-RB | 2830 | CG11778-RB | 69..2830 | 1..2762 | 13795 | 99.9 | Plus |
CG13742.a | 2310 | CG13742.a | 1601..2243 | 2398..1756 | 3200 | 99.8 | Minus |
CG13742-RB | 2364 | CG13742-RB | 1655..2297 | 2398..1756 | 3200 | 99.8 | Minus |
CG13742.a | 2310 | CG13742.a | 1296..1593 | 2714..2417 | 1475 | 99.6 | Minus |
CG13742-RB | 2364 | CG13742-RB | 1350..1647 | 2714..2417 | 1475 | 99.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4970769..4971535 | 483..1249 | 3835 | 100 | Plus |
chr2R | 21145070 | chr2R | 4972218..4972880 | 1756..2418 | 3300 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 4972930..4973275 | 2417..2762 | 1715 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 4971591..4971918 | 1249..1576 | 1640 | 100 | Plus |
chr2R | 21145070 | chr2R | 4970227..4970544 | 167..484 | 1590 | 100 | Plus |
chr2R | 21145070 | chr2R | 4971979..4972160 | 1577..1758 | 910 | 100 | Plus |
chr2R | 21145070 | chr2R | 4970010..4970176 | 1..167 | 835 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9083211..9083977 | 483..1249 | 3835 | 100 | Plus |
2R | 25286936 | 2R | 9084660..9085322 | 1756..2418 | 3300 | 99.8 | Plus |
2R | 25286936 | 2R | 9085372..9085719 | 2417..2764 | 1740 | 100 | Plus |
2R | 25286936 | 2R | 9084033..9084360 | 1249..1576 | 1640 | 100 | Plus |
2R | 25286936 | 2R | 9082669..9082986 | 167..484 | 1590 | 100 | Plus |
2R | 25286936 | 2R | 9084421..9084602 | 1577..1758 | 910 | 100 | Plus |
2R | 25286936 | 2R | 9082452..9082618 | 1..167 | 835 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9084410..9085176 | 483..1249 | 3835 | 100 | Plus |
2R | 25260384 | 2R | 9085859..9086521 | 1756..2418 | 3300 | 99.8 | Plus |
2R | 25260384 | 2R | 9086571..9086918 | 2417..2764 | 1740 | 100 | Plus |
2R | 25260384 | 2R | 9085232..9085559 | 1249..1576 | 1640 | 100 | Plus |
2R | 25260384 | 2R | 9083868..9084185 | 167..484 | 1590 | 100 | Plus |
2R | 25260384 | 2R | 9085620..9085801 | 1577..1758 | 910 | 100 | Plus |
2R | 25260384 | 2R | 9083651..9083817 | 1..167 | 835 | 100 | Plus |
2R | 25260384 | 2R | 9082395..9082483 | 939..1027 | 175 | 79.7 | Plus |
2R | 25260384 | 2R | 9083170..9083259 | 1583..1672 | 165 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1029..1066 | 2718..2755 | 118 | 78.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4970010..4970176 | 1..167 | 100 | -> | Plus |
chr2R | 4970228..4970543 | 168..483 | 100 | -> | Plus |
chr2R | 4970770..4971534 | 484..1248 | 100 | -> | Plus |
chr2R | 4971591..4971918 | 1249..1576 | 100 | -> | Plus |
chr2R | 4971979..4972159 | 1577..1757 | 100 | -> | Plus |
chr2R | 4972220..4972880 | 1758..2418 | 99 | -> | Plus |
chr2R | 4972932..4973275 | 2419..2762 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11778-RB | 1..1773 | 23..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11778-RB | 1..1773 | 23..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CNT1-RB | 1..1773 | 23..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11778-RA | 1..1559 | 23..1584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CNT1-RB | 1..1773 | 23..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11778-RB | 16..2777 | 1..2762 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11778-RB | 16..2777 | 1..2762 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CNT1-RB | 58..2819 | 1..2762 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11778-RA | 16..1596 | 1..1584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CNT1-RB | 58..2819 | 1..2762 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9082452..9082618 | 1..167 | 100 | -> | Plus |
2R | 9082670..9082985 | 168..483 | 100 | -> | Plus |
2R | 9083212..9083976 | 484..1248 | 100 | -> | Plus |
2R | 9084033..9084360 | 1249..1576 | 100 | -> | Plus |
2R | 9084421..9084601 | 1577..1757 | 100 | -> | Plus |
2R | 9084662..9085322 | 1758..2418 | 99 | -> | Plus |
2R | 9085374..9085717 | 2419..2762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9082452..9082618 | 1..167 | 100 | -> | Plus |
2R | 9082670..9082985 | 168..483 | 100 | -> | Plus |
2R | 9083212..9083976 | 484..1248 | 100 | -> | Plus |
2R | 9084033..9084360 | 1249..1576 | 100 | -> | Plus |
2R | 9084421..9084601 | 1577..1757 | 100 | -> | Plus |
2R | 9084662..9085322 | 1758..2418 | 99 | -> | Plus |
2R | 9085374..9085717 | 2419..2762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9082452..9082618 | 1..167 | 100 | -> | Plus |
2R | 9082670..9082985 | 168..483 | 100 | -> | Plus |
2R | 9083212..9083976 | 484..1248 | 100 | -> | Plus |
2R | 9084033..9084360 | 1249..1576 | 100 | -> | Plus |
2R | 9084421..9084601 | 1577..1757 | 100 | -> | Plus |
2R | 9084662..9085322 | 1758..2418 | 99 | -> | Plus |
2R | 9085374..9085717 | 2419..2762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4969957..4970123 | 1..167 | 100 | -> | Plus |
arm_2R | 4970175..4970490 | 168..483 | 100 | -> | Plus |
arm_2R | 4970717..4971481 | 484..1248 | 100 | -> | Plus |
arm_2R | 4971538..4971865 | 1249..1576 | 100 | -> | Plus |
arm_2R | 4971926..4972106 | 1577..1757 | 100 | -> | Plus |
arm_2R | 4972167..4972827 | 1758..2418 | 99 | -> | Plus |
arm_2R | 4972879..4973222 | 2419..2762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9083869..9084184 | 168..483 | 100 | -> | Plus |
2R | 9084411..9085175 | 484..1248 | 100 | -> | Plus |
2R | 9085232..9085559 | 1249..1576 | 100 | -> | Plus |
2R | 9085620..9085800 | 1577..1757 | 100 | -> | Plus |
2R | 9085861..9086521 | 1758..2418 | 99 | -> | Plus |
2R | 9086573..9086916 | 2419..2762 | 100 | Plus | |
2R | 9083651..9083817 | 1..167 | 100 | -> | Plus |
Translation from 1 to 1794
> GH08391.pep CFSFIHTMAEPIEGEQEEKPPPSRAKRITYLVLHVLLHIIFISYFTAATI IFIFYDKDSKECWPNRGSEATTESIDNSTEDDDDDDYDTEETSEKPVPEV KPKLLCQINWCHGYGFLIVLFILFYILWLYYWVFKPFVGIKLYNNYLEPV IDKWIAFSRQWIVSGVMLAIVLAVVVAYLGFECRNDAYKAIGLLGPVCFV LIGFAVSKHHLQVPWRIVTHGLLGQLLLGILCLRLPFGRSIFQCLGDKVT IFLNYAQHGARFVYGDRICDEYVFAFAILAVVFFFSVITSIMYYLGWMQF ILNGFGFLLQAMVGTTVCESVNAAGNVFLSMTESPLVIRPYIEILTVSEL HAICTSGYATVAGTVLGAYVSFGASASFLIAASVMAAPGSLAFAKLFYPE TEESLTRSDNIKLESSTDTSILDAAASGAAAALLIVLGIVSNIIAFLAIV FFLDAVTEWIFELIGLHNITLLYILSQIFIPIVFVMGVPWHDCQAIGLVV AQKSFINEFVAYRNLGILVSDKKVDPRSAAIATFALCGFANPGSLGIVIA SLSAMAPSRRSDITRVAFRSYFAGSFVSFTSASLAGILIQNEYTGGN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12226-PA | 640 | GF12226-PA | 13..613 | 19..592 | 1835 | 61.1 | Plus |
Dana\GF12225-PA | 605 | GF12225-PA | 33..584 | 11..592 | 1375 | 49.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23408-PA | 605 | GG23408-PA | 1..605 | 8..597 | 2562 | 86.4 | Plus |
Dere\GG23407-PA | 603 | GG23407-PA | 44..582 | 13..592 | 1320 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21636-PA | 588 | GH21636-PA | 28..569 | 12..592 | 1304 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CNT1-PB | 590 | CG11778-PB | 1..590 | 8..597 | 3035 | 100 | Plus |
CNT2-PC | 603 | CG8083-PC | 44..582 | 13..592 | 1398 | 49.5 | Plus |
CNT2-PB | 602 | CG8083-PB | 43..581 | 13..592 | 1398 | 49.5 | Plus |
CNT2-PA | 603 | CG8083-PA | 44..582 | 13..592 | 1398 | 49.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20090-PA | 594 | GI20090-PA | 25..574 | 2..592 | 1312 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17615-PA | 603 | GL17615-PA | 2..574 | 10..592 | 1936 | 67.2 | Plus |
Dper\GL17614-PA | 607 | GL17614-PA | 55..585 | 24..591 | 1306 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11193-PA | 595 | GA11193-PA | 2..568 | 10..586 | 1942 | 67.6 | Plus |
Dpse\GA20810-PA | 607 | GA20810-PA | 55..585 | 24..591 | 1309 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21089-PA | 611 | GM21089-PA | 1..581 | 8..586 | 2662 | 92.9 | Plus |
Dsec\GM21088-PA | 603 | GM21088-PA | 44..587 | 13..597 | 1325 | 49.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10626-PA | 611 | GD10626-PA | 1..581 | 8..586 | 2693 | 93.3 | Plus |
Dsim\GD10625-PA | 603 | GD10625-PA | 44..587 | 13..597 | 1329 | 49.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19856-PA | 599 | GJ19856-PA | 75..576 | 83..592 | 1271 | 51.6 | Plus |
Translation from 1 to 1794
> GH08391.hyp CFSFIHTMAEPIEGEQEEKPPPSRAKRITYLVLHVLLHIIFISYFTAATI IFIFYDKDSKECWPNRGSEATTESIDNSTEDDDDDDYDTEETSEKPVPEV KPKLLCQINWCHGYGFLIVLFILFYILWLYYWVFKPFVGIKLYNNYLEPV IDKWIAFSRQWIVSGVMLAIVLAVVVAYLGFECRNDAYKAIGLLGPVCFV LIGFAVSKHHLQVPWRIVTHGLLGQLLLGILCLRLPFGRSIFQCLGDKVT IFLNYAQHGARFVYGDRICDEYVFAFAILAVVFFFSVITSIMYYLGWMQF ILNGFGFLLQAMVGTTVCESVNAAGNVFLSMTESPLVIRPYIEILTVSEL HAICTSGYATVAGTVLGAYVSFGASASFLIAASVMAAPGSLAFAKLFYPE TEESLTRSDNIKLESSTDTSILDAAASGAAAALLIVLGIVSNIIAFLAIV FFLDAVTEWIFELIGLHNITLLYILSQIFIPIVFVMGVPWHDCQAIGLVV AQKSFINEFVAYRNLGILVSDKKVDPRSAAIATFALCGFANPGSLGIVIA SLSAMAPSRRSDITRVAFRSYFAGSFVSFTSASLAGILIQNEYTGGN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CNT1-PB | 590 | CG11778-PB | 1..590 | 8..597 | 3035 | 100 | Plus |
CG8083-PB | 602 | CG8083-PB | 43..581 | 13..592 | 1398 | 49.5 | Plus |
CG8083-PC | 603 | CG8083-PC | 44..582 | 13..592 | 1398 | 49.5 | Plus |
CG8083-PA | 603 | CG8083-PA | 44..582 | 13..592 | 1398 | 49.5 | Plus |