Clone Sequence Records
GH08406.complete Sequence
1470 bp assembled on 2011-03-28
GenBank Submission: BT126284.1
> GH08406.complete
AAGGCCCTCAAATCAGCTGTTTTGTGTTTTGATTTTATTTTGAAAGTCCT
AGTTTAAAATTATGCTTTCTCCGACAGATCAGCACAAATAATACTAATAA
AGCTCACAATGCTAAGGTTGTGCCTTCCAACTCGAGCTGGATATGTGCTT
TCTCGAACGACAAACCAAGAAAACCCGAAACACACTATGAAGTTTTGAAT
ATTCGCATGATTGCAGCACCCGTGAAGTCCGTAATGCCTTTGTCCAGCTC
TCCAAATTGTACCACCCAGATGTTAAGAGCAATGCTGCGTGTCCGGAGCG
CACAGCCCGATTTGTTCAGATCTCCGAGGCGTACAAGACCCTGATAAAGC
CGGAGCGGAGGAGAGACTACGATGACAGCCTGCTGTGGCAGCCATCGCGC
TCGGACCGCAGTCCCGTTGGCGAGACGGTCAATCCCGGCCAGGCGTGGGA
TGTGAGGCCCAACTACGATCCCAATCCAGGACCGTACTATGGCATCCGTG
GTCTGAAGAGGGTCTCCAACTGGCAGGTGGCCGTGGTTCTGATGGCCCTA
GGCTTCGTCGGGGCACTCTTTGGCTTCACCTCCGTCAGGTCGTCCTTTAA
ACTGAGTCGCCAGATCCAGGACGAAATCTCAGCAGAGGCTAATTCCCATC
ATGCCGCCGTTGTGGCCGATGCCCAGAAGTACGGCAACGAGGAGCAAGTG
CGTCGTATGGTGGACCGTATGTCGCGGAGTCCTTTCAACCAGTCTTCGGC
TAAGTAATCCCATTTCCCCATTTCCTTTGGTCAAATTAAACGTGAAAGCA
TATAGCTATTTTTGAATATTTTGTTTTGGTTCAAGGCAAAGCAAACTCAA
GAGCGATTGCTTAAGCGCCAGTGTGTTTTGCCAAAATTAAACAATTTCGT
CGGCCTTCGTAGGCGATTGAGCAAACTGTGCAAACAACCAGGGCGACTAC
TTAAGCACTCCGGCCGCATCCATCGAAGCATATTAAAAGCAATCCTACTA
CCAACATGAAGTCAACTATTCAAATCGGCACCCTGTGCATCGTGGTGCTC
GTGATCTGCTGCCTGGACTTCTCCAGTTCACAGAACTCCTCCTCCACTTC
CACCAGTCCCACCTACAGCTCGTCCAGCACGCCCAAGAAAGTGTACCTGT
CCAACTTGACGTACTCGATTGTGAGGAAGATCCGTGTGGGCACCACCACC
GCCAGCAGCACCAGCCGTAGTTCCAGGACCAGGAGCAACCGGAAACTGAA
CGCCAAGAAGACCCAGGCCAAACGGAGCCAGGCCAAGCGCTCCGGCAAGA
ACAGGAAGTCGAACTCCCGCCGTGCCAGCAGGGGCTAAGTTGTTGTCCAG
TCGGTTATGTTATTAAGACAAGGTTTTATTTTGAGCTCGTTCTAAACACA
AAACACTTAAGTTTACCGTCGCGACGGGAAGATTAAATTAGATAAATACG
TAAAAAAAAAAAAAAAAAAA
GH08406.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:03:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 20043674..20044539 | 1451..586 | 4330 | 100 | Minus |
chr2R | 21145070 | chr2R | 20044596..20044927 | 590..259 | 1660 | 100 | Minus |
chr2R | 21145070 | chr2R | 20045155..20045302 | 148..1 | 740 | 100 | Minus |
chr2R | 21145070 | chr2R | 20044980..20045091 | 259..149 | 510 | 99.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:03:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24157666..24158533 | 1453..586 | 4340 | 100 | Minus |
2R | 25286936 | 2R | 24158590..24158921 | 590..259 | 1660 | 100 | Minus |
2R | 25286936 | 2R | 24159149..24159296 | 148..1 | 740 | 100 | Minus |
2R | 25286936 | 2R | 24158974..24159085 | 259..149 | 510 | 99.1 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:09:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 24158865..24159732 | 1453..586 | 4340 | 100 | Minus |
2R | 25260384 | 2R | 24159789..24160120 | 590..259 | 1660 | 100 | Minus |
2R | 25260384 | 2R | 24160348..24160495 | 148..1 | 740 | 100 | Minus |
2R | 25260384 | 2R | 24160173..24160284 | 259..149 | 520 | 99.1 | Minus |
Blast to na_te.dros performed 2019-03-16 23:03:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tabor | 7345 | Tabor TABOR 7345bp | 1390..1426 | 835..799 | 113 | 78.4 | Minus |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 7178..7246 | 830..762 | 111 | 62.3 | Minus |
GH08406.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:04:44 Download gff for
GH08406.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 20043674..20044536 | 589..1451 | 100 | <- | Minus |
chr2R | 20044598..20044926 | 260..588 | 100 | <- | Minus |
chr2R | 20044980..20045091 | 149..259 | 99 | <- | Minus |
chr2R | 20045155..20045302 | 1..148 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-11 16:14:55 Download gff for
GH08406.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DnaJ-60-RC | 1..654 | 109..757 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:03:13 Download gff for
GH08406.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DnaJ-60-RA | 1..654 | 109..757 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:35:02 Download gff for
GH08406.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DnaJ-60-RA | 1..654 | 109..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-11 16:14:54 Download gff for
GH08406.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42568-RA | 1..1452 | 1..1451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:03:13 Download gff for
GH08406.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42568-RA | 17..1468 | 1..1451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:35:02 Download gff for
GH08406.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42568-RA | 17..1468 | 1..1451 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:04:44 Download gff for
GH08406.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24157668..24158530 | 589..1451 | 100 | <- | Minus |
2R | 24158592..24158920 | 260..588 | 100 | <- | Minus |
2R | 24158974..24159085 | 149..259 | 99 | <- | Minus |
2R | 24159149..24159296 | 1..148 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:04:44 Download gff for
GH08406.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24157668..24158530 | 589..1451 | 100 | <- | Minus |
2R | 24158592..24158920 | 260..588 | 100 | <- | Minus |
2R | 24158974..24159085 | 149..259 | 99 | <- | Minus |
2R | 24159149..24159296 | 1..148 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:04:44 Download gff for
GH08406.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24157668..24158530 | 589..1451 | 100 | <- | Minus |
2R | 24158592..24158920 | 260..588 | 100 | <- | Minus |
2R | 24158974..24159085 | 149..259 | 99 | <- | Minus |
2R | 24159149..24159296 | 1..148 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:03:13 Download gff for
GH08406.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20045191..20046053 | 589..1451 | 100 | <- | Minus |
arm_2R | 20046115..20046443 | 260..588 | 100 | <- | Minus |
arm_2R | 20046497..20046608 | 149..259 | 99 | <- | Minus |
arm_2R | 20046672..20046819 | 1..148 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:03:35 Download gff for
GH08406.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24158885..24159747 | 589..1451 | 100 | <- | Minus |
2R | 24159809..24160137 | 260..588 | 100 | <- | Minus |
2R | 24160191..24160302 | 149..259 | 99 | <- | Minus |
2R | 24160366..24160513 | 1..148 | 100 | | Minus |
GH08406.pep Sequence
Translation from 1005 to 1337
> GH08406.pep
MKSTIQIGTLCIVVLVICCLDFSSSQNSSSTSTSPTYSSSSTPKKVYLSN
LTYSIVRKIRVGTTTASSTSRSSRTRSNRKLNAKKTQAKRSQAKRSGKNR
KSNSRRASRG*
GH08406.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:44:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG19947-PA | 368 | GG19947-PA | 208..366 | 1..107 | 212 | 49.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:02:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42568-PB | 110 | CG42568-PB | 1..110 | 1..110 | 535 | 100 | Plus |
CG42568-PA | 110 | CG42568-PA | 1..110 | 1..110 | 535 | 100 | Plus |
CG34273-PA | 128 | CG34273-PA | 40..124 | 23..105 | 165 | 49.4 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:44:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL17110-PA | 110 | GL17110-PA | 8..110 | 11..110 | 135 | 48.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:44:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA24363-PA | 110 | GA24363-PA | 8..110 | 11..110 | 135 | 48.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:44:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM18266-PA | 108 | GM18266-PA | 1..106 | 1..107 | 381 | 89.7 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:44:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD15197-PA | 108 | GD15197-PA | 1..106 | 1..107 | 324 | 87.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:45:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE11477-PA | 109 | GE11477-PA | 1..107 | 1..107 | 324 | 82.2 | Plus |
GH08406.hyp Sequence
Translation from 1005 to 1337
> GH08406.hyp
MKSTIQIGTLCIVVLVICCLDFSSSQNSSSTSTSPTYSSSSTPKKVYLSN
LTYSIVRKIRVGTTTASSTSRSSRTRSNRKLNAKKTQAKRSQAKRSGKNR
KSNSRRASRG*
GH08406.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:24:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42568-PB | 110 | CG42568-PB | 1..110 | 1..110 | 535 | 100 | Plus |
CG42568-PA | 110 | CG42568-PA | 1..110 | 1..110 | 535 | 100 | Plus |
CG34273-PA | 128 | CG34273-PA | 40..124 | 23..105 | 165 | 49.4 | Plus |