BDGP Sequence Production Resources |
Search the DGRC for GH08407
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 84 |
Well: | 7 |
Vector: | pOT2 |
Associated Gene/Transcript | hmw-RA |
Protein status: | GH08407.pep: gold |
Preliminary Size: | 2008 |
Sequenced Size: | 2059 |
Gene | Date | Evidence |
---|---|---|
CG7669 | 2001-01-01 | Release 2 assignment |
CG7669 | 2001-11-09 | Blastp of sequenced clone |
CG7669 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7669 | 2008-04-29 | Release 5.5 accounting |
CG7669 | 2008-08-15 | Release 5.9 accounting |
CG7669 | 2008-12-18 | 5.12 accounting |
2059 bp (2059 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069067
> GH08407.complete CACACGGGTGACAACGCTAATACCCCAAAAAAAACAAAATACACTACAAA CGACGAAAGGAACTTAATCAGAGAACCGACGAAGAATAAGCATACAGGAT GTCGGGGGCTGGAGAACACTCAGATGAAGAGTCCTATGGAGAGGAGTCCT TCGAGGAGGACTCGGAGTCGGAGGTGGAGGTGGAGGAAGAAGAGATTGAG TATATTGAGCCAGAGGAGTCAAAACCAAGTGACGCTCTTCTGTTGGGGGA GAGCGACACCCAAAGCGAGAGCGATGTGAAAGAAGAGTTTCTTAGCGGCA ACCCACACGCCCGTCGCTATTTGGGCGCCCGAGTGGTGTCCTACCTGAGT TCCTCCTCTGACGACGAAAGCCAAGTGGTCATCACCAAGACGGTAGCCGA GGTAAATCAACTAAGTCTGCGAGTGGACACGCCTCCGGAGGATGAGACGC CCTCGGTGCGCACTCTGATGCCAGGCAGTGCCCATTCTCGGGTTAAGGAT GAGGACGAGGCTGAAGACGAGGATGATGACGAAGGTGATGGCGAAAATGA TAACGATAATGAGGACGAGAATGATGACGAGGATGCTGAAGTCGAGGAAA TCGAAGAAGAGGAGGAAGAAATTCCAGGAGACGAAGACGACGCCCAAAGC GATGGATCCATGGGTCGTCAATCCGCCGACGACAGCGACGAGGAGGAGGG CACGGATGTGGAAGTGGAGCAGCTGGAGGAGGACGAACCAATTGTAACAG CTGTGTGCAAAAAGACGGTCCAGAAGGAGTTACCACCGCCCCAGAAGGAC ATTGTTTCGCTGGTCGATGCCAGTGATAACAGTAGTGAGCACAGTGTGGT CACCATGTGTGCATCAGGAGACGAAACAGACAACACCTTGGTGAAGTATC CTAGATTACGAAAGCAGCAACCACTTACTGCTAAGGATTCGCAATCGCTA AAAGAGCAGGAAGAACCGGAAGAACCGGAACAACCCGAAGAAAATCAAAC AGAAGAACACATGCCAACATCACAGCCCGATCTGGCGAGGGTTCGGTACC TGGAGCAGCAGATGACCCAAATGTCGGAATTGATCATGAAGTCATTCCAG ATCAATGGAGGAGCGCCAAATAGCCAAGCCTTCGAGCAGCTTGCCATGGC CACGGAGATGTTGCAGCAACGAAGTGACAGGCGCGGGGACACTGAATCCG AGATGTCATCGATGACGGAAACGACTATGACCAGTGCTAGGAGCTTGGGT GGAGGAATTCCCCCCCTGACAATGCGGATGGAGCGTTCTCAGGAGGCACT ACTCACGACGCGATCTTCCAAGCTACCCAGACCCAAATGCAGATGTCCCT CGGAATCGGATTTAATTGAACACGAGCAGAAACTGGATATGGGTCACGAG TTGCCCCATGACCTGGCAGCGAACTTCGGCTTGGGCGAAGGCTACCTCGT AGACGAATGTGGCCAGGGCGACGGACTCATGAGGCATCCACAACAGCGCA AACCAATGGAGTTAAACAGGCGAGCCGTTAGCGGAACTCCAAGCACCTTC AACAGCGACGGTTGCGAGTATCAAATCAATGTGTCGCGTTCCCGCTGCTC TAATGATAAGATTAACTATAAAAACCTTGGGCGCAAAAGCTTTAGCTTTA CGAATCCCCAAGTGCGCGAGATCGAGCGCCAGAATCAGATTCTTTTGCGC AAGATGATGACTGTGAAGCCCACGGCGACGATCAAGGCTAGCACCAGTAG CATAAAGATCAATGGGCCCGAGAAGCGACAGACACCTCCAGCGCCACGAC TGTCCAGCGCAGCTGTGAACCGGAAGAAGAATCAGCGCCAGATCGACCTG GACAACGATCTGCTCAAGCGGAAACTGGAGGCCATCGGCACACGGCGACC GCAATTCAAGTGACGCCTCCACAGGCAGCTCCAACTGTGTTCATTAAGTA ATTAAAAGTGTTTATGCGAATTTACAAAATTAAAATTTATTGCAAGTTGA AAAGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7669-RA | 2088 | CG7669-RA | 82..2088 | 1..2007 | 10035 | 100 | Plus |
WRNexo-RA | 1532 | WRNexo-RA | 1490..1532 | 2012..1970 | 215 | 100 | Minus |
WRNexo-RB | 1535 | WRNexo-RB | 1493..1535 | 2012..1970 | 215 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 14187277..14187977 | 915..1615 | 3490 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 14186610..14187224 | 303..917 | 3000 | 99.2 | Plus |
chr3R | 27901430 | chr3R | 14186236..14186537 | 1..302 | 1510 | 100 | Plus |
chr3R | 27901430 | chr3R | 14188252..14188485 | 1774..2007 | 1140 | 99.1 | Plus |
chr3R | 27901430 | chr3R | 14188032..14188191 | 1616..1775 | 800 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 18363069..18363769 | 915..1615 | 3505 | 100 | Plus |
3R | 32079331 | 3R | 18362402..18363016 | 303..917 | 3075 | 100 | Plus |
3R | 32079331 | 3R | 18362028..18362329 | 1..302 | 1510 | 100 | Plus |
3R | 32079331 | 3R | 18364044..18364282 | 1774..2012 | 1195 | 100 | Plus |
3R | 32079331 | 3R | 18363824..18363983 | 1616..1775 | 800 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 18103900..18104600 | 915..1615 | 3505 | 100 | Plus |
3R | 31820162 | 3R | 18103233..18103847 | 303..917 | 3075 | 100 | Plus |
3R | 31820162 | 3R | 18102859..18103160 | 1..302 | 1510 | 100 | Plus |
3R | 31820162 | 3R | 18104875..18105113 | 1774..2012 | 1195 | 100 | Plus |
3R | 31820162 | 3R | 18104655..18104814 | 1616..1775 | 800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 14186236..14186537 | 1..302 | 100 | -> | Plus |
chr3R | 14186610..14186804 | 303..497 | 100 | == | Plus |
chr3R | 14186897..14187224 | 590..917 | 98 | -> | Plus |
chr3R | 14187280..14187977 | 918..1615 | 95 | -> | Plus |
chr3R | 14188032..14188191 | 1616..1775 | 100 | -> | Plus |
chr3R | 14188254..14188485 | 1776..2007 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7669-RA | 1..1815 | 99..1913 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7669-RA | 1..1815 | 99..1913 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7669-RA | 1..1815 | 99..1913 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7669-RA | 1..1815 | 99..1913 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
hmw-RA | 1..1815 | 99..1913 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7669-RA | 35..2041 | 1..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7669-RA | 35..2041 | 1..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7669-RA | 35..2041 | 1..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7669-RA | 35..2041 | 1..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
hmw-RA | 35..2041 | 1..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18362028..18362329 | 1..302 | 100 | -> | Plus |
3R | 18362402..18363016 | 303..917 | 100 | -> | Plus |
3R | 18363072..18363769 | 918..1615 | 100 | -> | Plus |
3R | 18363824..18363983 | 1616..1775 | 100 | -> | Plus |
3R | 18364046..18364277 | 1776..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18362028..18362329 | 1..302 | 100 | -> | Plus |
3R | 18362402..18363016 | 303..917 | 100 | -> | Plus |
3R | 18363072..18363769 | 918..1615 | 100 | -> | Plus |
3R | 18363824..18363983 | 1616..1775 | 100 | -> | Plus |
3R | 18364046..18364277 | 1776..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18362028..18362329 | 1..302 | 100 | -> | Plus |
3R | 18362402..18363016 | 303..917 | 100 | -> | Plus |
3R | 18363072..18363769 | 918..1615 | 100 | -> | Plus |
3R | 18363824..18363983 | 1616..1775 | 100 | -> | Plus |
3R | 18364046..18364277 | 1776..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 14187750..14188051 | 1..302 | 100 | -> | Plus |
arm_3R | 14188124..14188738 | 303..917 | 100 | -> | Plus |
arm_3R | 14188794..14189491 | 918..1615 | 100 | -> | Plus |
arm_3R | 14189546..14189705 | 1616..1775 | 100 | -> | Plus |
arm_3R | 14189768..14189999 | 1776..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18102859..18103160 | 1..302 | 100 | -> | Plus |
3R | 18103233..18103847 | 303..917 | 100 | -> | Plus |
3R | 18103903..18104600 | 918..1615 | 100 | -> | Plus |
3R | 18104655..18104814 | 1616..1775 | 100 | -> | Plus |
3R | 18104877..18105108 | 1776..2007 | 100 | Plus |
Translation from 98 to 1912
> GH08407.pep MSGAGEHSDEESYGEESFEEDSESEVEVEEEEIEYIEPEESKPSDALLLG ESDTQSESDVKEEFLSGNPHARRYLGARVVSYLSSSSDDESQVVITKTVA EVNQLSLRVDTPPEDETPSVRTLMPGSAHSRVKDEDEAEDEDDDEGDGEN DNDNEDENDDEDAEVEEIEEEEEEIPGDEDDAQSDGSMGRQSADDSDEEE GTDVEVEQLEEDEPIVTAVCKKTVQKELPPPQKDIVSLVDASDNSSEHSV VTMCASGDETDNTLVKYPRLRKQQPLTAKDSQSLKEQEEPEEPEQPEENQ TEEHMPTSQPDLARVRYLEQQMTQMSELIMKSFQINGGAPNSQAFEQLAM ATEMLQQRSDRRGDTESEMSSMTETTMTSARSLGGGIPPLTMRMERSQEA LLTTRSSKLPRPKCRCPSESDLIEHEQKLDMGHELPHDLAANFGLGEGYL VDECGQGDGLMRHPQQRKPMELNRRAVSGTPSTFNSDGCEYQINVSRSRC SNDKINYKNLGRKSFSFTNPQVREIERQNQILLRKMMTVKPTATIKASTS SIKINGPEKRQTPPAPRLSSAAVNRKKNQRQIDLDNDLLKRKLEAIGTRR PQFK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16900-PA | 629 | GF16900-PA | 1..629 | 1..604 | 1602 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22859-PA | 599 | GG22859-PA | 1..599 | 1..604 | 2134 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18340-PA | 536 | GH18340-PA | 40..536 | 52..604 | 788 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hmw-PA | 604 | CG7669-PA | 1..604 | 1..604 | 3096 | 100 | Plus |
l(2)01289-PG | 1191 | CG9432-PG | 740..920 | 114..311 | 169 | 25.7 | Plus |
l(2)01289-PM | 1193 | CG9432-PM | 740..920 | 114..311 | 169 | 25.7 | Plus |
Sh3beta-PE | 485 | CG8582-PE | 179..473 | 4..311 | 160 | 20.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23321-PA | 541 | GI23321-PA | 7..170 | 7..166 | 176 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24340-PA | 708 | GL24340-PA | 298..708 | 228..604 | 727 | 44.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20512-PB | 646 | GA20512-PB | 5..646 | 9..604 | 881 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17864-PA | 612 | GM17864-PA | 1..612 | 1..604 | 2423 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19226-PA | 608 | GD19226-PA | 1..608 | 1..604 | 2454 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10324-PA | 548 | GJ10324-PA | 1..548 | 1..604 | 807 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11597-PA | 662 | GK11597-PA | 252..662 | 234..604 | 765 | 47.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25533-PA | 596 | GE25533-PA | 1..596 | 1..604 | 2169 | 74.2 | Plus |
Translation from 98 to 1912
> GH08407.hyp MSGAGEHSDEESYGEESFEEDSESEVEVEEEEIEYIEPEESKPSDALLLG ESDTQSESDVKEEFLSGNPHARRYLGARVVSYLSSSSDDESQVVITKTVA EVNQLSLRVDTPPEDETPSVRTLMPGSAHSRVKDEDEAEDEDDDEGDGEN DNDNEDENDDEDAEVEEIEEEEEEIPGDEDDAQSDGSMGRQSADDSDEEE GTDVEVEQLEEDEPIVTAVCKKTVQKELPPPQKDIVSLVDASDNSSEHSV VTMCASGDETDNTLVKYPRLRKQQPLTAKDSQSLKEQEEPEEPEQPEENQ TEEHMPTSQPDLARVRYLEQQMTQMSELIMKSFQINGGAPNSQAFEQLAM ATEMLQQRSDRRGDTESEMSSMTETTMTSARSLGGGIPPLTMRMERSQEA LLTTRSSKLPRPKCRCPSESDLIEHEQKLDMGHELPHDLAANFGLGEGYL VDECGQGDGLMRHPQQRKPMELNRRAVSGTPSTFNSDGCEYQINVSRSRC SNDKINYKNLGRKSFSFTNPQVREIERQNQILLRKMMTVKPTATIKASTS SIKINGPEKRQTPPAPRLSSAAVNRKKNQRQIDLDNDLLKRKLEAIGTRR PQFK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hmw-PA | 604 | CG7669-PA | 1..604 | 1..604 | 3096 | 100 | Plus |
l(2)01289-PG | 1191 | CG9432-PG | 740..920 | 114..311 | 169 | 25.7 | Plus |
l(2)01289-PM | 1193 | CG9432-PM | 740..920 | 114..311 | 169 | 25.7 | Plus |
Sh3beta-PE | 485 | CG8582-PE | 179..473 | 4..311 | 160 | 20.9 | Plus |