BDGP Sequence Production Resources |
Search the DGRC for GH08429
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 84 |
Well: | 29 |
Vector: | pOT2 |
Associated Gene/Transcript | Grp-RA |
Protein status: | GH08429.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1513 |
Gene | Date | Evidence |
---|---|---|
CG4680 | 2001-01-01 | Release 2 assignment |
CG4680 | 2001-07-04 | Blastp of sequenced clone |
CG4680 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4680 | 2008-04-29 | Release 5.5 accounting |
CG4680 | 2008-08-15 | Release 5.9 accounting |
CG4680 | 2008-12-18 | 5.12 accounting |
1513 bp (1513 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047572
> GH08429.complete CCGAAACGTCGCCGCGAACGCAACGATCGGTTAACGGTAAAGATATAGAA GGCCACCCTCTTTGGAACTAGTAATAGTAGTCCTACGGGAGATTAGTCCA GAATGGATCCCGAGTTCGTGAACAAATACAATCAGGTCCTTAGCCGTCTG AAGCTAGTGGAGAACTTCGATGGCAGTGATCCTGGCAAGCTGCCGCAGTT CCTGCACAAAATCGAGGCCCTTATGCCGGCCATAAATAGTTTCGACGACT ACTACAAGTTTCAATTGATAGGACATATCAAAAATAAGTGCACAGATCGC GCCAGGGAGGCGGTCTTCACGCGACAAATGAGCGCTCCCGTGGGCAATGG CAATGGCAATGGCGGCGGGAATGGTCATCTCCTGAAGGCCGAGTCCTGGC TAAAACTCAAGGATCAACTGCTGTACAACTATGCGGAGCGGGAGTCTAGC TACTCGCTGATACACAAGATACGCAGCGCTGTCTTGGACTCGAACATAGA GTTGTACTACCAGAAGATGGCCAAACTCAAGCACAGACTGATCAATAGAA AGCTCACGCACAATGACACCCTGTACAGTCTCGAGGACATAGAGCGCATC ACGCTGCAGGTGTTCCGAGATCATCTGCCCGAGCCGACGCACTCGATGAT CCTGCGCCGGAATCCCAAGAGCATGGAGGAGGCCTATCGCTACATAGTGG AGGTGCAGCAGCAGTTCTACACACAGAGCGGATCTCTGGCCAGTGACCAT CAGGCGGCCACCTTCAGCACCAGCCACAAGCAGCAGTCCTACGGCGTGGG AATGGGCGGAGTGGGCGTGAGCACCGTTGGCGTGGGCGTCGGAATGGGCA TGGGCGCTGTGGGGTTGGGACTCTCCTCCTACGTTCGTCAAATGTCCAAC GACAAGGGACAGCAGAATAGCACGAAGAGCTACTACAATCAGTCGGCTCC GCCGGTGGGCGCCGGCAAGAATCATCCGATGTTCAAGAGCATTGGCAACC CCACCTTTAAGTCCAGCTTCAGCTACAATGGCACCAGCAGCAATTCGGGC ATGGGATCGAATTACTCGAGTACCAAGAAGTCGGACATCAAGCAGAACTA CCAGCAGCAGAAGAGTCAGAACTACTCGAAGACCTCGTCGGCTAGTGCTT GGAAGAAGTAGTAGTTGACATGGCTAGACGATCTCACCCTCCAATCGATC GGCGGTCCAGTGAGATAAGCGTATCGAGCATGACCTAATCCCTTGGAGCC TGTGACTAAGCCAGGGCAAAGTGATTGCCACCTCATGCTAATTACCCCGA TACCTCACCCTCTAATGGCGATGAGGTGGCCGAAGATTATAGGATGTGAA TATAGATTAAATTGTGATGAGAGAGCCATACTGGGTGCAACGAGATGGAG GTGATCTGATCCCTGTTTCGCGATAATCATAACCAATCCCTATCAGTACA ACTAAGACGATAATGATGTGAATGTTCAAATAAAACAAATAATACAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16384616..16386110 | 1..1495 | 7175 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16394848..16396345 | 1..1498 | 7490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16387948..16389445 | 1..1498 | 7490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 5606..5649 | 1451..1493 | 118 | 77.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16384616..16386110 | 1..1495 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4680-RA | 1..1059 | 103..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4680-RA | 1..1059 | 103..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Grp-RA | 1..1059 | 103..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4680-RA | 1..1059 | 103..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Grp-RA | 1..1059 | 103..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4680-RA | 220..1714 | 1..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4680-RA | 220..1714 | 1..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Grp-RA | 220..1714 | 1..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4680-RA | 220..1714 | 1..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Grp-RA | 11..1505 | 1..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16394848..16396342 | 1..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16394848..16396342 | 1..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16394848..16396342 | 1..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16387948..16389442 | 1..1495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16387948..16389442 | 1..1495 | 100 | Plus |
Translation from 102 to 1160
> GH08429.hyp MDPEFVNKYNQVLSRLKLVENFDGSDPGKLPQFLHKIEALMPAINSFDDY YKFQLIGHIKNKCTDRAREAVFTRQMSAPVGNGNGNGGGNGHLLKAESWL KLKDQLLYNYAERESSYSLIHKIRSAVLDSNIELYYQKMAKLKHRLINRK LTHNDTLYSLEDIERITLQVFRDHLPEPTHSMILRRNPKSMEEAYRYIVE VQQQFYTQSGSLASDHQAATFSTSHKQQSYGVGMGGVGVSTVGVGVGMGM GAVGLGLSSYVRQMSNDKGQQNSTKSYYNQSAPPVGAGKNHPMFKSIGNP TFKSSFSYNGTSSNSGMGSNYSSTKKSDIKQNYQQQKSQNYSKTSSASAW KK*
Translation from 102 to 1160
> GH08429.pep MDPEFVNKYNQVLSRLKLVENFDGSDPGKLPQFLHKIEALMPAINSFDDY YKFQLIGHIKNKCTDRAREAVFTRQMSAPVGNGNGNGGGNGHLLKAESWL KLKDQLLYNYAERESSYSLIHKIRSAVLDSNIELYYQKMAKLKHRLINRK LTHNDTLYSLEDIERITLQVFRDHLPEPTHSMILRRNPKSMEEAYRYIVE VQQQFYTQSGSLASDHQAATFSTSHKQQSYGVGMGGVGVSTVGVGVGMGM GAVGLGLSSYVRQMSNDKGQQNSTKSYYNQSAPPVGAGKNHPMFKSIGNP TFKSSFSYNGTSSNSGMGSNYSSTKKSDIKQNYQQQKSQNYSKTSSASAW KK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24276-PA | 348 | GF24276-PA | 1..348 | 1..352 | 1487 | 88.1 | Plus |
Dana\GF19748-PA | 311 | GF19748-PA | 9..230 | 9..247 | 354 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16003-PA | 350 | GG16003-PA | 1..350 | 1..352 | 1828 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15891-PA | 348 | GH15891-PA | 1..348 | 1..352 | 1236 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gagr-PB | 352 | CG4680-PB | 1..352 | 1..352 | 1834 | 100 | Plus |
Gagr-PA | 352 | CG4680-PA | 1..352 | 1..352 | 1834 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16543-PA | 456 | GI16543-PA | 1..263 | 1..264 | 1101 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17861-PA | 365 | GL17861-PA | 1..365 | 1..352 | 1360 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18352-PA | 365 | GA18352-PA | 1..365 | 1..352 | 1359 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25635-PA | 352 | GM25635-PA | 1..352 | 1..352 | 1806 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14639-PA | 352 | GD14639-PA | 1..352 | 1..352 | 1811 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12794-PA | 373 | GJ12794-PA | 1..318 | 1..300 | 1165 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16714-PA | 360 | GK16714-PA | 1..315 | 1..303 | 1190 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23012-PA | 352 | GE23012-PA | 1..352 | 1..352 | 1804 | 96 | Plus |