BDGP Sequence Production Resources |
Search the DGRC for GH08474
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 84 |
Well: | 74 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11876-RA |
Protein status: | GH08474.pep: gold |
Preliminary Size: | 1797 |
Sequenced Size: | 1464 |
Gene | Date | Evidence |
---|---|---|
CG11876 | 2001-01-01 | Release 2 assignment |
CG11876 | 2001-07-04 | Blastp of sequenced clone |
CG11876 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11876 | 2008-04-29 | Release 5.5 accounting |
CG11876 | 2008-08-15 | Release 5.9 accounting |
CG11876 | 2008-12-18 | 5.12 accounting |
1464 bp (1464 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047573
> GH08474.complete TAAACCCATAGCCCATTTTTAGTTAGATAATAGCACTTAAAACCCAAAAA ATAACACCTACAGCCGGCAACGATAGCGATAGACCCATAGGAAAGCGAAC CGCAAACCGACGATGCTCCGAACCCGACTCATCCAGGCGGCCAGCTCCGC CCAGCGAGCGTTCTCCACCAGCCAGAAGGCCCTGGCGGCCAAGCAGATGA CCGTGCGAGATGCCCTCAACAGCGCATTGGACGATGAGCTGGCCCGCGAC GACCGCGTCTTCATCCTGGGCGAGGAGGTGGCCCAGTACGACGGTGCTTA CAAGGTTTCCCGTGGACTGTGGAAGAAGTACGGCGACAAGCGCGTCATCG ACACGCCAATCACAGAGATGGGCTTTGCCGGCATCGCTGTTGGCGCTGCC ATGGCCGGTCTGCGTCCCGTGTGCGAGTTCATGACCTGGAACTTCTCCAT GCAGGCCATCGATCACATCATCAACTCGGCGGCCAAGACCTTCTACATGT CTGCCGGTGCCGTCAATGTGCCCATTGTGTTCCGTGGTCCCAATGGAGCC GCTTCCGGTGTTGCCGCCCAGCACTCTCAGTGCTTCGCCGCCTGGTACGC CCACTGCCCCGGCCTGAAGGTCCTTTCGCCATACGATGCCGAGGATGCCC GCGGACTGTTGAAGTCCGCAATCCGTGATCCCGATCCAGTGGTCTTCCTG GAGAATGAGCTGGTCTATGGCACGGCATTCCCTGTGGCCGATAACGTGGC CGACAAGGACTTCTTGGTGCCCATCGGCAAGGCCAAGGTAATGCGGCCGG GCAAGGACATTACCCTGGTGGCGCATTCCAAGGCGGTGGAGACATCGCTT CTGGCAGCTGCCGAGCTGGCCAAGAAGGGTATTGAGGCTGAGGTCATTAA CCTGCGCTCCATTCGTCCTCTGGACACGGCGACCATCTTCGCCTCTGTAC GAAAGACCCACCATCTGGTGACCGTGGAGAACGGCTGGCCCCAACACGGC GTTGGAGCTGAGATCTGCGCCCGCATAATGGAGGACCAGACCTTCTTCGA GCTGGACGCCCCCGTATGGCGCTGCGCCGGCGTGGATGTGCCCATGCCCT ATGCCAAGACGCTGGAGGCCCACGCCCTGCCCCGCGTTCAGGATCTCGTG GAGGCGACTCTTAAGGTCTTGGGTGGCAAAGTGGGCAAGGCCGCTGCGGC CAACAAGTAGGAACTCAGGACTAGCCAGCCTCCCGATCGGAACCCCCAGC TAACTAAATTTATAGTCCAAGTCGAAACGCTGCCTCTGGTCTAACCGAGC TGCCCCCATAATAGTGCACCGAACTGGAAATTGAATGTTCTGAAAATAAA GCACTACCGCTTTCGGGTTTTGATTAGTTTTCGGACGTTCTAGTTTAATT ATTTGGTTATAGAAATCTCTTGTGAAAAATAAACGAAAACATAAATAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 24938644..24939092 | 998..1446 | 2245 | 100 | Plus |
chr3R | 27901430 | chr3R | 24937991..24938405 | 467..881 | 2075 | 100 | Plus |
chr3R | 27901430 | chr3R | 24936043..24936348 | 1..306 | 1515 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 24936889..24937052 | 303..466 | 820 | 100 | Plus |
chr3R | 27901430 | chr3R | 24938463..24938584 | 878..999 | 610 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 29115747..29116196 | 998..1447 | 2250 | 100 | Plus |
3R | 32079331 | 3R | 29115094..29115508 | 467..881 | 2075 | 100 | Plus |
3R | 32079331 | 3R | 29113146..29113451 | 1..306 | 1530 | 100 | Plus |
3R | 32079331 | 3R | 29113992..29114155 | 303..466 | 820 | 100 | Plus |
3R | 32079331 | 3R | 29115566..29115687 | 878..999 | 610 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 28856578..28857027 | 998..1447 | 2250 | 100 | Plus |
3R | 31820162 | 3R | 28855925..28856339 | 467..881 | 2075 | 100 | Plus |
3R | 31820162 | 3R | 28853977..28854282 | 1..306 | 1530 | 100 | Plus |
3R | 31820162 | 3R | 28854823..28854986 | 303..466 | 820 | 100 | Plus |
3R | 31820162 | 3R | 28856397..28856518 | 878..999 | 610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 24936043..24936346 | 1..304 | 99 | -> | Plus |
chr3R | 24936891..24937052 | 305..466 | 100 | -> | Plus |
chr3R | 24937991..24938402 | 467..878 | 100 | -> | Plus |
chr3R | 24938464..24938583 | 879..998 | 100 | -> | Plus |
chr3R | 24938645..24939092 | 999..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11876-RD | 1..1098 | 113..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11876-RD | 1..1098 | 113..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11876-RA | 1..1098 | 113..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11876-RD | 1..1098 | 113..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11876-RA | 1..1098 | 113..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11876-RD | 42..1487 | 1..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11876-RD | 42..1487 | 1..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11876-RA | 70..1453 | 63..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11876-RD | 42..1487 | 1..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11876-RA | 70..1453 | 63..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29113146..29113449 | 1..304 | 100 | -> | Plus |
3R | 29113994..29114155 | 305..466 | 100 | -> | Plus |
3R | 29115094..29115505 | 467..878 | 100 | -> | Plus |
3R | 29115567..29115686 | 879..998 | 100 | -> | Plus |
3R | 29115748..29116195 | 999..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29113146..29113449 | 1..304 | 100 | -> | Plus |
3R | 29113994..29114155 | 305..466 | 100 | -> | Plus |
3R | 29115094..29115505 | 467..878 | 100 | -> | Plus |
3R | 29115567..29115686 | 879..998 | 100 | -> | Plus |
3R | 29115748..29116195 | 999..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29113146..29113449 | 1..304 | 100 | -> | Plus |
3R | 29113994..29114155 | 305..466 | 100 | -> | Plus |
3R | 29115094..29115505 | 467..878 | 100 | -> | Plus |
3R | 29115567..29115686 | 879..998 | 100 | -> | Plus |
3R | 29115748..29116195 | 999..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 24938868..24939171 | 1..304 | 100 | -> | Plus |
arm_3R | 24939716..24939877 | 305..466 | 100 | -> | Plus |
arm_3R | 24940816..24941227 | 467..878 | 100 | -> | Plus |
arm_3R | 24941289..24941408 | 879..998 | 100 | -> | Plus |
arm_3R | 24941470..24941917 | 999..1446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28855925..28856336 | 467..878 | 100 | -> | Plus |
3R | 28853977..28854280 | 1..304 | 100 | -> | Plus |
3R | 28854825..28854986 | 305..466 | 100 | -> | Plus |
3R | 28856398..28856517 | 879..998 | 100 | -> | Plus |
3R | 28856579..28857026 | 999..1446 | 100 | Plus |
Translation from 112 to 1209
> GH08474.hyp MLRTRLIQAASSAQRAFSTSQKALAAKQMTVRDALNSALDDELARDDRVF ILGEEVAQYDGAYKVSRGLWKKYGDKRVIDTPITEMGFAGIAVGAAMAGL RPVCEFMTWNFSMQAIDHIINSAAKTFYMSAGAVNVPIVFRGPNGAASGV AAQHSQCFAAWYAHCPGLKVLSPYDAEDARGLLKSAIRDPDPVVFLENEL VYGTAFPVADNVADKDFLVPIGKAKVMRPGKDITLVAHSKAVETSLLAAA ELAKKGIEAEVINLRSIRPLDTATIFASVRKTHHLVTVENGWPQHGVGAE ICARIMEDQTFFELDAPVWRCAGVDVPMPYAKTLEAHALPRVQDLVEATL KVLGGKVGKAAAANK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11876-PD | 365 | CG11876-PD | 1..365 | 1..365 | 1866 | 100 | Plus |
CG11876-PA | 365 | CG11876-PA | 1..365 | 1..365 | 1866 | 100 | Plus |
CG11876-PB | 273 | CG11876-PB | 1..118 | 1..118 | 596 | 100 | Plus |
CG11876-PC | 273 | CG11876-PC | 1..118 | 1..118 | 596 | 100 | Plus |
CG17691-PE | 364 | CG17691-PE | 41..341 | 27..330 | 468 | 36.8 | Plus |
Translation from 112 to 1209
> GH08474.pep MLRTRLIQAASSAQRAFSTSQKALAAKQMTVRDALNSALDDELARDDRVF ILGEEVAQYDGAYKVSRGLWKKYGDKRVIDTPITEMGFAGIAVGAAMAGL RPVCEFMTWNFSMQAIDHIINSAAKTFYMSAGAVNVPIVFRGPNGAASGV AAQHSQCFAAWYAHCPGLKVLSPYDAEDARGLLKSAIRDPDPVVFLENEL VYGTAFPVADNVADKDFLVPIGKAKVMRPGKDITLVAHSKAVETSLLAAA ELAKKGIEAEVINLRSIRPLDTATIFASVRKTHHLVTVENGWPQHGVGAE ICARIMEDQTFFELDAPVWRCAGVDVPMPYAKTLEAHALPRVQDLVEATL KVLGGKVGKAAAANK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23287-PA | 509 | GF23287-PA | 263..497 | 119..353 | 1200 | 93.6 | Plus |
Dana\GF23287-PA | 509 | GF23287-PA | 1..118 | 1..118 | 533 | 89.8 | Plus |
Dana\GF15686-PA | 505 | GF15686-PA | 181..504 | 26..354 | 497 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11642-PA | 365 | GG11642-PA | 1..365 | 1..365 | 1901 | 97.3 | Plus |
Dere\GG23089-PA | 361 | GG23089-PA | 37..338 | 26..330 | 476 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19645-PA | 360 | GH19645-PA | 1..359 | 1..359 | 1687 | 86.1 | Plus |
Dgri\GH13348-PA | 322 | GH13348-PA | 1..307 | 29..340 | 490 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pdhb-PD | 365 | CG11876-PD | 1..365 | 1..365 | 1866 | 100 | Plus |
Pdhb-PA | 365 | CG11876-PA | 1..365 | 1..365 | 1866 | 100 | Plus |
Pdhb-PB | 273 | CG11876-PB | 1..118 | 1..118 | 596 | 100 | Plus |
Pdhb-PC | 273 | CG11876-PC | 1..118 | 1..118 | 596 | 100 | Plus |
CG17691-PE | 364 | CG17691-PE | 41..341 | 27..330 | 468 | 36.8 | Plus |
CG17691-PC | 364 | CG17691-PC | 41..341 | 27..330 | 468 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22271-PA | 356 | GI22271-PA | 1..356 | 1..356 | 1684 | 86.8 | Plus |
Dmoj\GI18255-PA | 364 | GI18255-PA | 16..349 | 7..340 | 485 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23909-PA | 365 | GL23909-PA | 1..365 | 1..365 | 1746 | 89.9 | Plus |
Dper\GL21161-PA | 347 | GL21161-PA | 14..332 | 17..340 | 507 | 37.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11252-PA | 365 | GA11252-PA | 1..365 | 1..365 | 1745 | 89.9 | Plus |
Dpse\GA11252-PB | 275 | GA11252-PB | 1..118 | 1..118 | 568 | 89 | Plus |
Dpse\GA29202-PA | 347 | GA29202-PA | 14..332 | 17..340 | 507 | 37.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12765-PA | 365 | GM12765-PA | 1..365 | 1..365 | 1936 | 99.7 | Plus |
Dsec\GM10081-PA | 364 | GM10081-PA | 40..341 | 26..330 | 484 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21413-PA | 448 | GD21413-PA | 195..448 | 112..365 | 1330 | 97.6 | Plus |
Dsim\GD21413-PA | 448 | GD21413-PA | 1..118 | 1..118 | 625 | 100 | Plus |
Dsim\GD17911-PA | 159 | GD17911-PA | 1..145 | 88..234 | 225 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24064-PA | 360 | GJ24064-PA | 1..359 | 1..359 | 1715 | 87.2 | Plus |
Dvir\GJ17514-PA | 364 | GJ17514-PA | 17..349 | 8..340 | 490 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11887-PA | 512 | GK11887-PA | 266..500 | 119..353 | 1162 | 90.2 | Plus |
Dwil\GK11887-PA | 512 | GK11887-PA | 1..119 | 1..118 | 551 | 88.2 | Plus |
Dwil\GK23412-PA | 361 | GK23412-PA | 38..359 | 27..353 | 491 | 36.7 | Plus |