BDGP Sequence Production Resources |
Search the DGRC for GH08526
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 85 |
Well: | 26 |
Vector: | pOT2 |
Associated Gene/Transcript | Ssl1-RA |
Protein status: | GH08526.pep: gold |
Preliminary Size: | 1419 |
Sequenced Size: | 1587 |
Gene | Date | Evidence |
---|---|---|
CG11115 | 2001-01-01 | Release 2 assignment |
CG11115 | 2001-07-04 | Blastp of sequenced clone |
CG11115 | 2003-01-01 | Sim4 clustering to Release 3 |
Ssl1 | 2008-04-29 | Release 5.5 accounting |
Ssl1 | 2008-08-15 | Release 5.9 accounting |
Ssl1 | 2008-12-18 | 5.12 accounting |
1587 bp (1587 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047574
> GH08526.complete AGCCGGCGCATTTTATTTAGCGTTAATTGCTTTTCTTTCTTGATTTGACT TGGTAGTGCATCAGGACTGCAAGTATGGCCGACGATGAGCAAGAGGACCA GAAGGAGTACCGCTGGGAAACGGGCTATGAAAAGACATGGGAGGCCATCA AGGACGACGAGGATGGGATGCTGGATGGAGCCATTGCAGAGATCATTCAG AAGGCCAAACGCCAGAGGCAGGCTCAAAAGTCCAAGCAGAACCGCCTGGG CATGATGCGCCACATGTTCGTTGTGCTCGATTGCTCTGAGTCCATGAGCG TGCCTGATTTGAAACCCACACGACTGCGGTGCACCGTCAAGCTGCTGGAG CTGTTTATCGAGGAGTTCTTCGATCAGAACCCCATCAGCCAATTAGGACT CATAGCGCTAAAAGCTAAGCGAGCGGAGAAGGTGACCGAACTTACCGGCA CTTCGCGCGTGCACCTCAAAGCGCTAGAGAGCTTGGCTAACGTGTCCTTG ACCAGCGAGCCTTCGCTGCAAAATGGCCTAGATCTGGCCCTAAAATCGCT TAAGGTGGTGCCGTCGCACGCCTCCCGAGAGATCGTCATTATCATGGGCT CGCTCACCACATGTGATCCTGTCGATATTAACCTCACCATCGACGAGTTA AAAAAGGAGGGCATACGCTGCTCGGTTATTTCCCTGTCCGCTGAGATTCA CGTGGCCCGCTACCTCACTCAGCAAACAATGGGCACCTTCGGGGCTGTTT TGGATGATGCACATTTTCGGGATCAACTCATGTCTCAGGTAGATCCACCG CCCGCCGCTAAGACTCAGCACAACTCGCTTATTCGCATGGGCTTCCCGCA CACAAAGAATGAAGTTGAGGGCAAGGACGCGCCATTGTCCATGTGCATGT GCCACATAGAGAACTTGGAGGAGCCCAGTGAACTGACCACTACTGGCCAC CACTGCCCGCAATGCAACAGCAAGTACTGCGAGCTGCCCGTGGAGTGCCA GTCTTGCGGCCTCACCCTGGTCTCCGCGCCGCACTTGGCGCGTTCCTACC ACCACCTTTTCCCGGTGCCAAATTTTGAGGAACTGCCGTTTGAGGCGATG CCTGCTTCGTCATCCGACCTCACCAGCGATGTCAGGGAATGTTACGGCTG CGCCAAAGCTCTTGGGCAAGGCGTTGACAAGGTCGCCGATAAAGTCGTCT TCAGATGCGGTTTCTGCAAGCAGTTCTTCTGCGTTGACTGCGACATCTTC ATTCACGACACATTGCACGCCTGCGTGGGATGCAACACCATTCCCGGCGT AGACGGTCTGGTTTACCAGCAAAGTTCCAAGTCTGACCAGGTTGATGCAC ACCCAGGGCCCTCAAAGCAGCGCGGCCAGTGTGGGATGTAACTGACTTTC TATAGATAGATATTTCGAACTTCCACATAACTACGCATTTGGGGCAAACA AAATACAGTTCGTTTCGAAACGGTGGTTATGAGTTGTATCAATTAAAATC TGGTTTTATGCTTAATAATTGTGAAGGCGAGCGTAGCATTATTATGGCCG TTGTGTGAGACCCTCTCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 22868792..22869879 | 480..1567 | 5440 | 100 | Plus |
chr3L | 24539361 | chr3L | 22868399..22868741 | 139..481 | 1715 | 100 | Plus |
chr3L | 24539361 | chr3L | 22868208..22868347 | 1..140 | 700 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 22879876..22880965 | 480..1569 | 5450 | 100 | Plus |
3L | 28110227 | 3L | 22879483..22879825 | 139..481 | 1715 | 100 | Plus |
3L | 28110227 | 3L | 22879292..22879431 | 1..140 | 700 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 22872976..22874065 | 480..1569 | 5450 | 100 | Plus |
3L | 28103327 | 3L | 22872583..22872925 | 139..481 | 1715 | 100 | Plus |
3L | 28103327 | 3L | 22872392..22872531 | 1..140 | 700 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 22868208..22868346 | 1..139 | 100 | -> | Plus |
chr3L | 22868400..22868741 | 140..481 | 100 | -> | Plus |
chr3L | 22868794..22869879 | 482..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ssl1-RA | 1..1317 | 75..1391 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ssl1-RA | 1..1317 | 75..1391 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ssl1-RA | 1..1317 | 75..1391 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ssl1-RA | 1..1317 | 75..1391 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ssl1-RA | 1..1317 | 75..1391 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ssl1-RA | 147..1713 | 1..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ssl1-RA | 147..1713 | 1..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ssl1-RA | 147..1713 | 1..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ssl1-RA | 147..1713 | 1..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ssl1-RA | 147..1713 | 1..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22879292..22879430 | 1..139 | 100 | -> | Plus |
3L | 22879484..22879825 | 140..481 | 100 | -> | Plus |
3L | 22879878..22880963 | 482..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22879292..22879430 | 1..139 | 100 | -> | Plus |
3L | 22879484..22879825 | 140..481 | 100 | -> | Plus |
3L | 22879878..22880963 | 482..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22879292..22879430 | 1..139 | 100 | -> | Plus |
3L | 22879484..22879825 | 140..481 | 100 | -> | Plus |
3L | 22879878..22880963 | 482..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 22872392..22872530 | 1..139 | 100 | -> | Plus |
arm_3L | 22872584..22872925 | 140..481 | 100 | -> | Plus |
arm_3L | 22872978..22874063 | 482..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22872584..22872925 | 140..481 | 100 | -> | Plus |
3L | 22872978..22874063 | 482..1567 | 100 | Plus | |
3L | 22872392..22872530 | 1..139 | 100 | -> | Plus |
Translation from 74 to 1390
> GH08526.hyp MADDEQEDQKEYRWETGYEKTWEAIKDDEDGMLDGAIAEIIQKAKRQRQA QKSKQNRLGMMRHMFVVLDCSESMSVPDLKPTRLRCTVKLLELFIEEFFD QNPISQLGLIALKAKRAEKVTELTGTSRVHLKALESLANVSLTSEPSLQN GLDLALKSLKVVPSHASREIVIIMGSLTTCDPVDINLTIDELKKEGIRCS VISLSAEIHVARYLTQQTMGTFGAVLDDAHFRDQLMSQVDPPPAAKTQHN SLIRMGFPHTKNEVEGKDAPLSMCMCHIENLEEPSELTTTGHHCPQCNSK YCELPVECQSCGLTLVSAPHLARSYHHLFPVPNFEELPFEAMPASSSDLT SDVRECYGCAKALGQGVDKVADKVVFRCGFCKQFFCVDCDIFIHDTLHAC VGCNTIPGVDGLVYQQSSKSDQVDAHPGPSKQRGQCGM*
Translation from 74 to 1390
> GH08526.pep MADDEQEDQKEYRWETGYEKTWEAIKDDEDGMLDGAIAEIIQKAKRQRQA QKSKQNRLGMMRHMFVVLDCSESMSVPDLKPTRLRCTVKLLELFIEEFFD QNPISQLGLIALKAKRAEKVTELTGTSRVHLKALESLANVSLTSEPSLQN GLDLALKSLKVVPSHASREIVIIMGSLTTCDPVDINLTIDELKKEGIRCS VISLSAEIHVARYLTQQTMGTFGAVLDDAHFRDQLMSQVDPPPAAKTQHN SLIRMGFPHTKNEVEGKDAPLSMCMCHIENLEEPSELTTTGHHCPQCNSK YCELPVECQSCGLTLVSAPHLARSYHHLFPVPNFEELPFEAMPASSSDLT SDVRECYGCAKALGQGVDKVADKVVFRCGFCKQFFCVDCDIFIHDTLHAC VGCNTIPGVDGLVYQQSSKSDQVDAHPGPSKQRGQCGM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11005-PA | 422 | GF11005-PA | 1..420 | 1..424 | 2029 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16285-PA | 438 | GG16285-PA | 1..438 | 1..438 | 2298 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16776-PA | 443 | GH16776-PA | 1..443 | 1..438 | 1959 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ssl1-PB | 438 | CG11115-PB | 1..438 | 1..438 | 2315 | 100 | Plus |
Ssl1-PA | 438 | CG11115-PA | 1..438 | 1..438 | 2315 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13436-PA | 461 | GI13436-PA | 1..411 | 1..416 | 1940 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24973-PA | 445 | GL24973-PA | 1..442 | 1..435 | 2061 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10767-PA | 445 | GA10767-PA | 1..442 | 1..435 | 2057 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22477-PA | 438 | GM22477-PA | 1..438 | 1..438 | 2334 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15058-PA | 438 | GD15058-PA | 1..438 | 1..438 | 2338 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11798-PA | 442 | GJ11798-PA | 1..442 | 1..438 | 1958 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12882-PA | 454 | GK12882-PA | 2..418 | 5..426 | 1830 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22646-PA | 438 | GE22646-PA | 1..438 | 1..438 | 2293 | 96.8 | Plus |