BDGP Sequence Production Resources |
Search the DGRC for GH08636
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 86 |
Well: | 36 |
Vector: | pOT2 |
Associated Gene/Transcript | phtf-RA |
Protein status: | GH08636.pep: gold |
Preliminary Size: | 3408 |
Sequenced Size: | 3069 |
Gene | Date | Evidence |
---|---|---|
CG3268 | 2000-02-14 | Blastp of sequenced clone |
CG3268 | 2001-01-01 | Release 2 assignment |
CG3268 | 2003-01-01 | Sim4 clustering to Release 3 |
phtf | 2008-04-29 | Release 5.5 accounting |
phtf | 2008-08-15 | Release 5.9 accounting |
phtf | 2008-12-18 | 5.12 accounting |
3069 bp (3069 high quality bases) assembled on 2000-02-14
GenBank Submission: AF181638
> GH08636.complete ATTTGTGAGCACACACTTTAGTTTTTCGTTAGGAACGGGACGTTCGTTCT GTTGCGCACCAAATTTTTTCGGACCCAATGCAAATGCAAACGCTTTTGCG GCGTGTGTAGTGCATTCAAAATTACCAGATACCCAACGGGATCCAAAGTT CCCAGAGCAGTGGCACCGGAATCGATGCGACCAGCAGTCAGCGGAAGCGT AAGAAATTCGCGCCTAGGTGGACAAAAATCGATCTGTGACGCGGTTTAAA CCAAGGCTGCACGACACTTCGAGGACTTTTATGTGATTATTACTATGAAA TTGGATGAAATAGTTGCATGGTACCAGAAGAGAATCGGCACCTATGACAA GCAAGAATGGGAAAAGACCGTCGAACAGAGGATATTGGACGGCTTCAATA GTGTCAATTTAAAAAACACCAAGCTGAAGACGGAGCTAATCGATGTGGAC TTGGTGCGAGGTTCCACGTTCCCTAAGGCCAAGCCCAAGCAGTCGTTACT CACTGTGATACGCCTGGCCATTCTGCGCTATGTCCTGCTGCCCCTCTATG CCCAGTGGTGGGTCAAGCAGACCACGCCAAACGCCTTCGGCTTCATCCTT GTGCTTTACCTCACACAGTTAACCAACTGGGCTATCTACGTGCTTCACAG CAGTCGCATAGTGCCCCTTGACTATGAGAAGCCGCCAAATGGAACCCTGC TTCAGGCAGAGGCAGATGGAGATGCCTCCGATAAGGATGCAGATAAGGAG TCCGAGGAACATGCCGCCCTCCTCAGTGCCCTGCTTATTCCGTGCGCCCT AAGCTTGCTGATCAGTCTCATCCACTCACAAATTGTAGCCACTAACACCG CCTCGGGTGTCTCTGGCGGGAGTAGCAAGAACAAGCTGCGTCGCATATCT GCAAGCTACTTAAGCGACAAAGCAGCAACCAGGGAGAACCGGGTGCGACG TCGCAAGAAGATTGTGCGAGTTCGACAAGTGGAGGCTGACTTGTCCCAGG CCAGCAGTAACATATCACTTCCAAACAGAAGAACCGCAACCAGCACAATC GAAGTTCTTCCCAGACCGGTCACGCCTTTGCCTTCACCAACAGTTACCTG TGCCACGGTGCCAGACCCCACCACGCCGACTACGCCTTCGCCATCTGTTA TCAGGCGGAGCACCAACGAGGAGACCTATTTGACAACGACTGCAATCAGC CCACTAACGCAACCGCTGGCAGCCATAGACGCATGCTACGATCTCAGCAG AAAGGCAGGGGGAGCTGCTCCCGAAAGCCCCAAAAAGCGCAACGTCAACT GGCACACGCCTATTCAGATATACGCTACCTACGAGCTGGGCGAAGAGCCG TGCTCCAGCAGAAAAGTCGCAGAAGAAAGTGCGCCTGAGTCGGTTGGAGA AAGATTGTGTTCCGTCAAGCCAGACTACCAGACGCGTCGAAACATCGGGG AGGACGATGGCTTCGAGAGTCTGAATGGAAAGAGCTCAAGTGGAGAGGAC AACAACCATTCGCCTTTGCCAAACGCGGTGGCTGTTGCGGCTCCACCAGC TCCTGTTCAGACCAATCAGTTGCGTCTGCGATTAAACACAACAAACGGTG TGACCGCCAGTGCTTCTCCAACCGAGAAGAAACCCCAGTCGCGCGGCAAT GAATCCTCAACGAGTTGCGCCGAATCGGATGAGTGCGATGATGCCGACAT TATGTCCAGTCCCGCCTCGGGCTGTAACCAAGAGTGCACCACTTCTGCCA CCGACTGGCTGGGGGTGACGACAAATAGCGAAGACTGCAGTTACACCTCT GATCTGGATCACTCTGACGGGGGCTTGAAGCACACGGCCTTTAGCGACGA AGATCCTGGAGAGCTGGACATCACCCCTACCACTATACTAAATCCACATA GCAGCCTCGACCGTATTAGCTGCACCATTTGGGATCAGCGAGATGCCAAA AAGGCGCAGCTTTCCGTGCTGGAGATCGCGTCTTGCATAATCGAACGCGT GGACTCAATGGGCGAGGCCAACGACTACATCTACATAGGCGTGGTCTTCT CTTTCCTGCTCACATTGATTCCCATCTTCTGCCGTCTCTGCGAGGTCACA CTCGGGAGCGATGCAGAGAAGGCCAGTGAGATTAGCTACTTTAACATGCC GCAGCTGCTGTGGGAGAAGTCATCGGCATCGCTCTTCACCCTGCTGGGCC TTGCCTTCGGCGACAGCCAGTGGGAGCGCATGGTATTGGCTCTGGGCTTT GTCCAACGCCTTTGCCTGACCCTCATACTGTTCATAATATTCGCCGTTGC AGAGCGCACCTTCAAGCAACGCTTCCTTTACGCCAAACTCTTCTCCCACC TAACTTCATCACGTAGGGCTCGAAAGTCAAATCTTCCCCACTTCCGTTTG AACAAGGTGCGTAACATCAAGACCTGGCTGAGCGTGAGGTCGTATTTGAA GAAACGCGGACCCCAGCGATCGGTGGATATCATCGTTTCCGCCGCCTTCA TAGTAACCCTCCTGTTGCTGGCCTTCCTCAGCGTCGAGTGGCTGAAGGAT TCGGCTCATCTGCACACACACCTTACCTTGGAGGCCCTAATCTGGTCCAT AACAATCGGTATCTTTCTGCTGCGCTTCATGACCCTAGGTCAGAAGATAC AGCACAAGTACCGCAGTGTGTCGGTGCTGATTACGGAGCAAATTAACTTG TATCTGCAGATCGAGCAGAAGCCAAAGAAAAAGGACGAGCTGATGGTGTC GAACAGCGTGCTCAAGCTGGCCGCCGATCTGCTAAAGGAACTCGAAACGC CATTCAAGCTCTCTGGCCTTAGTGCCAATCCATATCTATTCACAACCATC AAGGTGGTAATCCTGTCGGCCCTATCGGGCGTGCTTAGCGAAGTTTTAGG CTTTAAACTGAAGCTGCATAAAATCAAGATCAAGTAACCTATGCAAGGCG CAGACCCATCATATTTTTGTAGTACAACTTTTTAGAAACGCTTTAAGAGA AATCTAACACTACACTCTAAATTAGTTAAGTGAATAAATTTAAGCGAGCC AAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
phtf-RA | 3462 | phtf-RA | 98..3149 | 1..3052 | 15260 | 100 | Plus |
phtf.b | 3368 | phtf.b | 29..3077 | 1..3052 | 15190 | 99.9 | Plus |
phtf.c | 3311 | phtf.c | 996..3020 | 1028..3052 | 10125 | 100 | Plus |
phtf.c | 3311 | phtf.c | 29..997 | 1..969 | 4845 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 2630791..2631738 | 968..1915 | 4680 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 2632450..2633050 | 2450..3050 | 2990 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 2630234..2630743 | 459..968 | 2520 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 2632035..2632393 | 2093..2451 | 1795 | 100 | Plus |
chr2R | 21145070 | chr2R | 2629094..2629349 | 1..256 | 1265 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 2631798..2631978 | 1916..2096 | 905 | 100 | Plus |
chr2R | 21145070 | chr2R | 2630039..2630181 | 320..462 | 715 | 100 | Plus |
chr2R | 21145070 | chr2R | 2629902..2629971 | 254..323 | 350 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 6743592..6744539 | 968..1915 | 4740 | 100 | Plus |
2R | 25286936 | 2R | 6745251..6745853 | 2450..3052 | 3015 | 100 | Plus |
2R | 25286936 | 2R | 6743035..6743544 | 459..968 | 2550 | 100 | Plus |
2R | 25286936 | 2R | 6744836..6745194 | 2093..2451 | 1795 | 100 | Plus |
2R | 25286936 | 2R | 6741895..6742150 | 1..256 | 1280 | 100 | Plus |
2R | 25286936 | 2R | 6744599..6744779 | 1916..2096 | 905 | 100 | Plus |
2R | 25286936 | 2R | 6742840..6742982 | 320..462 | 715 | 100 | Plus |
2R | 25286936 | 2R | 6742703..6742772 | 254..323 | 350 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 6744791..6745738 | 968..1915 | 4740 | 100 | Plus |
2R | 25260384 | 2R | 6746450..6747052 | 2450..3052 | 3015 | 100 | Plus |
2R | 25260384 | 2R | 6744234..6744743 | 459..968 | 2550 | 100 | Plus |
2R | 25260384 | 2R | 6746035..6746393 | 2093..2451 | 1795 | 100 | Plus |
2R | 25260384 | 2R | 6743094..6743349 | 1..256 | 1280 | 100 | Plus |
2R | 25260384 | 2R | 6745798..6745978 | 1916..2096 | 905 | 100 | Plus |
2R | 25260384 | 2R | 6744039..6744181 | 320..462 | 715 | 100 | Plus |
2R | 25260384 | 2R | 6743902..6743971 | 254..323 | 350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 2631798..2631976 | 1916..2094 | 100 | -> | Plus |
chr2R | 2629094..2629348 | 1..255 | 99 | -> | Plus |
chr2R | 2629904..2629968 | 256..320 | 100 | -> | Plus |
chr2R | 2630040..2630179 | 321..460 | 100 | -> | Plus |
chr2R | 2630236..2630743 | 461..968 | 99 | -> | Plus |
chr2R | 2630792..2631738 | 969..1915 | 99 | -> | Plus |
chr2R | 2632037..2632393 | 2095..2451 | 100 | -> | Plus |
chr2R | 2632452..2633050 | 2452..3050 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
phtf-RA | 1..2643 | 295..2937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
phtf-RA | 1..2643 | 295..2937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
phtf-RA | 1..2643 | 295..2937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
phtf-RA | 1..2643 | 295..2937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
phtf-RA | 1..2643 | 295..2937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
phtf-RA | 29..3078 | 1..3050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
phtf-RA | 29..3078 | 1..3050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
phtf-RA | 1..3046 | 5..3050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
phtf-RA | 29..3078 | 1..3050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
phtf-RA | 1..3046 | 5..3050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6741895..6742149 | 1..255 | 100 | -> | Plus |
2R | 6742705..6742769 | 256..320 | 100 | -> | Plus |
2R | 6742841..6742980 | 321..460 | 100 | -> | Plus |
2R | 6743037..6743544 | 461..968 | 100 | -> | Plus |
2R | 6743593..6744539 | 969..1915 | 100 | -> | Plus |
2R | 6744599..6744777 | 1916..2094 | 100 | -> | Plus |
2R | 6744838..6745194 | 2095..2451 | 100 | -> | Plus |
2R | 6745253..6745851 | 2452..3050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6741895..6742149 | 1..255 | 100 | -> | Plus |
2R | 6742705..6742769 | 256..320 | 100 | -> | Plus |
2R | 6742841..6742980 | 321..460 | 100 | -> | Plus |
2R | 6743037..6743544 | 461..968 | 100 | -> | Plus |
2R | 6743593..6744539 | 969..1915 | 100 | -> | Plus |
2R | 6744599..6744777 | 1916..2094 | 100 | -> | Plus |
2R | 6744838..6745194 | 2095..2451 | 100 | -> | Plus |
2R | 6745253..6745851 | 2452..3050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6741895..6742149 | 1..255 | 100 | -> | Plus |
2R | 6742705..6742769 | 256..320 | 100 | -> | Plus |
2R | 6742841..6742980 | 321..460 | 100 | -> | Plus |
2R | 6743037..6743544 | 461..968 | 100 | -> | Plus |
2R | 6743593..6744539 | 969..1915 | 100 | -> | Plus |
2R | 6744599..6744777 | 1916..2094 | 100 | -> | Plus |
2R | 6744838..6745194 | 2095..2451 | 100 | -> | Plus |
2R | 6745253..6745851 | 2452..3050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 2630210..2630274 | 256..320 | 100 | -> | Plus |
arm_2R | 2630346..2630485 | 321..460 | 100 | -> | Plus |
arm_2R | 2629400..2629654 | 1..255 | 100 | -> | Plus |
arm_2R | 2630542..2631049 | 461..968 | 100 | -> | Plus |
arm_2R | 2631098..2632044 | 969..1915 | 100 | -> | Plus |
arm_2R | 2632104..2632282 | 1916..2094 | 100 | -> | Plus |
arm_2R | 2632343..2632699 | 2095..2451 | 100 | -> | Plus |
arm_2R | 2632758..2633356 | 2452..3050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6743094..6743348 | 1..255 | 100 | -> | Plus |
2R | 6743904..6743968 | 256..320 | 100 | -> | Plus |
2R | 6744040..6744179 | 321..460 | 100 | -> | Plus |
2R | 6744236..6744743 | 461..968 | 100 | -> | Plus |
2R | 6744792..6745738 | 969..1915 | 100 | -> | Plus |
2R | 6745798..6745976 | 1916..2094 | 100 | -> | Plus |
2R | 6746037..6746393 | 2095..2451 | 100 | -> | Plus |
2R | 6746452..6747050 | 2452..3050 | 100 | Plus |
Translation from 294 to 2936
> GH08636.pep MKLDEIVAWYQKRIGTYDKQEWEKTVEQRILDGFNSVNLKNTKLKTELID VDLVRGSTFPKAKPKQSLLTVIRLAILRYVLLPLYAQWWVKQTTPNAFGF ILVLYLTQLTNWAIYVLHSSRIVPLDYEKPPNGTLLQAEADGDASDKDAD KESEEHAALLSALLIPCALSLLISLIHSQIVATNTASGVSGGSSKNKLRR ISASYLSDKAATRENRVRRRKKIVRVRQVEADLSQASSNISLPNRRTATS TIEVLPRPVTPLPSPTVTCATVPDPTTPTTPSPSVIRRSTNEETYLTTTA ISPLTQPLAAIDACYDLSRKAGGAAPESPKKRNVNWHTPIQIYATYELGE EPCSSRKVAEESAPESVGERLCSVKPDYQTRRNIGEDDGFESLNGKSSSG EDNNHSPLPNAVAVAAPPAPVQTNQLRLRLNTTNGVTASASPTEKKPQSR GNESSTSCAESDECDDADIMSSPASGCNQECTTSATDWLGVTTNSEDCSY TSDLDHSDGGLKHTAFSDEDPGELDITPTTILNPHSSLDRISCTIWDQRD AKKAQLSVLEIASCIIERVDSMGEANDYIYIGVVFSFLLTLIPIFCRLCE VTLGSDAEKASEISYFNMPQLLWEKSSASLFTLLGLAFGDSQWERMVLAL GFVQRLCLTLILFIIFAVAERTFKQRFLYAKLFSHLTSSRRARKSNLPHF RLNKVRNIKTWLSVRSYLKKRGPQRSVDIIVSAAFIVTLLLLAFLSVEWL KDSAHLHTHLTLEALIWSITIGIFLLRFMTLGQKIQHKYRSVSVLITEQI NLYLQIEQKPKKKDELMVSNSVLKLAADLLKELETPFKLSGLSANPYLFT TIKVVILSALSGVLSEVLGFKLKLHKIKIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11068-PA | 876 | GF11068-PA | 1..866 | 1..870 | 3587 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23220-PA | 877 | GG23220-PA | 1..867 | 1..870 | 4172 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21753-PA | 890 | GH21753-PA | 1..880 | 1..870 | 3119 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
phtf-PA | 880 | CG3268-PA | 1..880 | 1..880 | 4482 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19299-PA | 875 | GI19299-PA | 1..865 | 1..870 | 3066 | 71.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11117-PA | 874 | GL11117-PA | 1..864 | 1..870 | 3484 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17066-PA | 874 | GA17066-PA | 1..864 | 1..870 | 3476 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20896-PA | 876 | GM20896-PA | 1..866 | 1..870 | 4159 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10421-PA | 878 | GD10421-PA | 1..878 | 1..880 | 4473 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22176-PA | 855 | GJ22176-PA | 1..845 | 1..870 | 3209 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22139-PA | 880 | GK22139-PA | 1..870 | 1..870 | 3170 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19073-PA | 877 | GE19073-PA | 1..867 | 1..870 | 4082 | 92.2 | Plus |
Translation from 294 to 2936
> GH08636.hyp MKLDEIVAWYQKRIGTYDKQEWEKTVEQRILDGFNSVNLKNTKLKTELID VDLVRGSTFPKAKPKQSLLTVIRLAILRYVLLPLYAQWWVKQTTPNAFGF ILVLYLTQLTNWAIYVLHSSRIVPLDYEKPPNGTLLQAEADGDASDKDAD KESEEHAALLSALLIPCALSLLISLIHSQIVATNTASGVSGGSSKNKLRR ISASYLSDKAATRENRVRRRKKIVRVRQVEADLSQASSNISLPNRRTATS TIEVLPRPVTPLPSPTVTCATVPDPTTPTTPSPSVIRRSTNEETYLTTTA ISPLTQPLAAIDACYDLSRKAGGAAPESPKKRNVNWHTPIQIYATYELGE EPCSSRKVAEESAPESVGERLCSVKPDYQTRRNIGEDDGFESLNGKSSSG EDNNHSPLPNAVAVAAPPAPVQTNQLRLRLNTTNGVTASASPTEKKPQSR GNESSTSCAESDECDDADIMSSPASGCNQECTTSATDWLGVTTNSEDCSY TSDLDHSDGGLKHTAFSDEDPGELDITPTTILNPHSSLDRISCTIWDQRD AKKAQLSVLEIASCIIERVDSMGEANDYIYIGVVFSFLLTLIPIFCRLCE VTLGSDAEKASEISYFNMPQLLWEKSSASLFTLLGLAFGDSQWERMVLAL GFVQRLCLTLILFIIFAVAERTFKQRFLYAKLFSHLTSSRRARKSNLPHF RLNKVRNIKTWLSVRSYLKKRGPQRSVDIIVSAAFIVTLLLLAFLSVEWL KDSAHLHTHLTLEALIWSITIGIFLLRFMTLGQKIQHKYRSVSVLITEQI NLYLQIEQKPKKKDELMVSNSVLKLAADLLKELETPFKLSGLSANPYLFT TIKVVILSALSGVLSEVLGFKLKLHKIKIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
phtf-PA | 880 | CG3268-PA | 1..880 | 1..880 | 4482 | 100 | Plus |