BDGP Sequence Production Resources |
Search the DGRC for GH08671
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 86 |
Well: | 71 |
Vector: | pOT2 |
Associated Gene/Transcript | Sirt4-RC |
Protein status: | GH08671.pep: gold |
Preliminary Size: | 2913 |
Sequenced Size: | 3028 |
Gene | Date | Evidence |
---|---|---|
CG15773 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3187 | 2002-05-30 | Blastp of sequenced clone |
CG3187 | 2003-01-01 | Sim4 clustering to Release 3 |
Sirt4 | 2008-04-29 | Release 5.5 accounting |
CG32758 | 2008-08-15 | Release 5.9 accounting |
Sirt4 | 2008-08-15 | Release 5.9 accounting |
CG32758 | 2008-12-18 | 5.12 accounting |
Sirt4 | 2008-12-18 | 5.12 accounting |
3028 bp (3028 high quality bases) assembled on 2002-05-30
GenBank Submission: BT011040
> GH08671.complete CGAGCCATCCTCACGGCAGGCGTGCAGCCGAAAGCTCTTCATGCCCACGG CGGGCACAACGTGTCCCTCCTTGCGACTATCACAGGAGCAGTGGGGAAAG ACGACATCTCCGTATCCTGGCAGTGTGCGGGCCAAGGCCAGATAATCGCC CGCTTTCTTGGCGTCCTGCAGCGCCTTCAGCTCATACAGGCGACCATCGG CTCGGATATTGCCGCGATTCACCTCGTCGACCGCCTGATAGAAGATAAAG CGGCCAGCCTGTTCGCCGTCCGGCAGCGTCAGCTCCTTGGCCACCGAGAA GAGCCAGCGACGGACGCAAAGGCAGGTGGATGAGGCCGTGCTGTAGTTCT GCACGTACAGCTGATGTGGAATCTCGTGCGGCTGCAGCTTTCGCTCAAAA TTGTACTCGACAATCTCGAACAGGTAAAAATACTGCTGCGTGTAGGCGGT GAGATTGGCGCGCTGCACCAGAATCTCCCACACCACCTGGGCATTGGAGG ACTTTTTCACCGACACGGTGCTAACTTCGTGATCGGGCAGCATCACCTTA ATGTCCACCGGCGATGCGGATATATCATCCTCCGTATCGGTGAGAAAGTC CTGAACGGCATCGCTCTCGGCAATCACCCGCACAGCACAGACTTTCTCCA GATACTGCTCCAGACCGCGCCGCCTCGTGTCCAGCTGCTGTTCGCTTAGC TGGAAGGGCCACTTGCCGGGCAGCTTGGGGAAGTTAAAGCCGGAAAACTC CTTGCGCAGCAGCGAGTGCAGGTTAGCAAACTCTCGATAGCGACGCGAAC AGAGCTGCCTTCCAGCCATGTGTATATTGAAGACGATGTACCGCTCGCCA TTTCGATTCACGATCCCATAGTCCGGTATGCTAATGGGCAGCGAGCGCTT GTCCGAATAATCGATGTAGGAGTAACCGCTCTGATCCTCCTGCGGCTCCA GTCGATCGGCCTCCTGCTGTGTCACTGATATCACCGTCAGAGTTAGGCAG TCACCGCCGGATTTGATCAGATCTACGACCTGTTTATGTGTGGCTCCCTC GACGCTGACGCCATTTACTTCCAGGATGCGATCGCCCTTCTTGATGCCCG CCTTCTCGGCCGCCCCATTCTCAAGGACGGCGCTCACGTGCTGAAGGGGG GCGTACAGCTCGCCGTTGATCGAGCGCAGTTGACCCCCCTCGGAAACTTG GCCGCGCACATTGAAGCCGAAGCCCGTTTCCGTTTTGTAAATGGTGACGA CACGGGGTCCATTCGCTGTGGTCACGCCTACGCCGACGCCCATGACGACC GCGCCGCCCCCACCGCCGCCCGATGATGCGGTGACTACGGCGCTGGCGGG GGTTGGGGTTGGGAGGGGATGGTTTTCGCCAACGATGCTCATTGCGCCGG TCGTTCGCTCTCGCTCGCACTCAGTGGTGATGGCTGCTCTTCTGCCTCCA CCGCACACCCCTCTCCACCTCCTCCTCCTCCTACGCTACTGCTGCTGCTG CTGCCCCTTTCCGACGTTCCTGCTTTCCGACTCACAGCAGCGCTGTGTTG TTTGCACAATATCTTTTGTTGTGTTATGGTTATTTCGCTCTTTTATTTTG CGTAATGTTTTCTGCAACTTCTTTTCGGCACACACACAGCACAACACACA CACACACGTATAGAGACAGGCACCGCCACTTTTACTTTTTACGCTCCTCC CTCAATCCGCTTCACCGCTGTGAACTGCGCTCCACCGAAACTCCTCTGGC TGCTCTTTCGTTCGCACACACATACACGCGCACACACCGAAAAAAAATTT ATTATTTATGTGGCTTATTTTATTTAACACACGCCTGTGTTTTCGCTCCT TATTTTATTTTCGCGCTGCTGTGCGTGCGCTCACCTCTAGTAACGTAACC GAAAAAGAACCAAATATTACTTGCAATAATACATAACAAAACAATGCGTG TGGGCCAGCTGCTCCGCTTCCGGAGCACCAGCTTGCGCAGCTCCACCGCC AGGCAGGAGTACGTGCCGCATCACAAGCCCGTCGTGGAGGACGACATCAA ACGGCTGGAGGACTTTCTCCTGTCCAAACCGAATGTTTTGGTTCTCACGG GCGCTGGCATCTCGACGGAATCGGGGATTCCCGATTACCGTTCCGAAGGC GTGGGCCTCTACGCCCGCTCCAACCACAAGCCCGTCCAGCACATGGAGTT CGTCAAGTCGTCGGCGGTGCGCAAGCGGTACTGGGCCAGGAACTTTGTGG GCTGGCCCAAGTTTTCTGCCACACAGCCCAATGCCACGCATCACGCGCTG GCCAGATTCGAGCGGGAGGAGCGGGTCCAGGCGGTGGTCACCCAGAACGT GGACCGGCTGCACACGAAGGCGGGCAGCCGAAATGTTGTGGAGGTTCATG GCAGTGGCTATGTGGTCAAGTGCCTGTCATGCGAGTACCGGATCGATCGT CACGAGTTCCAGAGCATACTGGCGTCGCTAAATCCGGCCTTCAAAGATGC CCCCGACATGATCCGGCCCGATGGCGATGTAGAGATACCGCTGGAGTACA TCGAGAACTTCCGGATACCCGAGTGTACGCAGTGCGGCGGCGACTTGAAG CCGGAAATTGTCTTCTTCGGAGATTCTGTGCCTCGGCCACGAGTGGATCA GATTGCCGGCATGGTGTACAATAGCGATGGCCTGCTTGTCCTCGGGTCCA GTCTCCTGGTCTTCTCCGGCTACCGCGTTGTCCTGCAGACCAAGGACCTC AAGCTACCGGTGGGCATTGTTAATATTGGCGAAACGCGCGCCGATCACCT GGCGGATATCAAGATATCCGCCAAGTGCGGCGATGTCATACCCAAACTGT TCGACTTTCGCAATTCGAAAAGCGTCAGTTAATACTCACAGTTGTTATAT GTTGACCCCCACTAAATTTGTAGTTATGGAAAGCCAGGCTTTCTATTTTA GCTAAAAAATAAATGTTAATGATTACTATTTGCAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 5557025..5557884 | 2983..2124 | 4255 | 99.7 | Minus |
chrX | 22417052 | chrX | 5614641..5615479 | 44..882 | 4090 | 99.2 | Plus |
chrX | 22417052 | chrX | 5629523..5630325 | 1067..1869 | 4015 | 100 | Plus |
chrX | 22417052 | chrX | 5558084..5558339 | 2125..1870 | 1280 | 100 | Minus |
chrX | 22417052 | chrX | 5615696..5615799 | 963..1066 | 520 | 100 | Plus |
chrX | 22417052 | chrX | 5615551..5615635 | 881..965 | 410 | 98.8 | Plus |
chrX | 22417052 | chrX | 5614531..5614575 | 1..45 | 225 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 5664625..5665487 | 2986..2124 | 4315 | 100 | Minus |
X | 23542271 | X | 5722207..5723045 | 44..882 | 4195 | 100 | Plus |
X | 23542271 | X | 5737099..5737901 | 1067..1869 | 4015 | 100 | Plus |
X | 23542271 | X | 5665687..5665942 | 2125..1870 | 1280 | 100 | Minus |
X | 23542271 | X | 5723259..5723362 | 963..1066 | 520 | 100 | Plus |
X | 23542271 | X | 5723114..5723198 | 881..965 | 425 | 100 | Plus |
X | 23542271 | X | 5722097..5722141 | 1..45 | 225 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 5672723..5673585 | 2986..2124 | 4315 | 100 | Minus |
X | 23527363 | X | 5730305..5731143 | 44..882 | 4195 | 100 | Plus |
X | 23527363 | X | 5745197..5745999 | 1067..1869 | 4015 | 100 | Plus |
X | 23527363 | X | 5673785..5674040 | 2125..1870 | 1280 | 100 | Minus |
X | 23527363 | X | 5731357..5731460 | 963..1066 | 520 | 100 | Plus |
X | 23527363 | X | 5731212..5731296 | 881..965 | 425 | 100 | Plus |
X | 23527363 | X | 5730195..5730239 | 1..45 | 225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 5615697..5615799 | 964..1066 | 100 | <- | Plus |
chrX | 5614531..5614574 | 1..44 | 100 | <- | Plus |
chrX | 5614642..5615477 | 45..880 | 99 | <- | Plus |
chrX | 5615551..5615633 | 881..963 | 98 | <- | Plus |
chrX | 5629523..5630325 | 1067..1869 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sirt4-RC | 1..939 | 1944..2882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sirt4-RC | 1..939 | 1944..2882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sirt4-RC | 1..939 | 1944..2882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sirt4-RC | 1..939 | 1944..2882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sirt4-RC | 1..939 | 1944..2882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32758-RA | 139..2007 | 1..1869 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32758-RA | 139..2007 | 1..1869 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32758-RA | 131..1999 | 1..1869 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32758-RA | 139..2007 | 1..1869 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32758-RA | 131..1999 | 1..1869 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5722097..5722140 | 1..44 | 100 | <- | Plus |
X | 5722208..5723043 | 45..880 | 100 | <- | Plus |
X | 5723114..5723196 | 881..963 | 100 | <- | Plus |
X | 5723260..5723362 | 964..1066 | 100 | <- | Plus |
X | 5737099..5737901 | 1067..1869 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5722097..5722140 | 1..44 | 100 | <- | Plus |
X | 5722208..5723043 | 45..880 | 100 | <- | Plus |
X | 5723114..5723196 | 881..963 | 100 | <- | Plus |
X | 5723260..5723362 | 964..1066 | 100 | <- | Plus |
X | 5737099..5737901 | 1067..1869 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5722097..5722140 | 1..44 | 100 | <- | Plus |
X | 5722208..5723043 | 45..880 | 100 | <- | Plus |
X | 5723114..5723196 | 881..963 | 100 | <- | Plus |
X | 5723260..5723362 | 964..1066 | 100 | <- | Plus |
X | 5737099..5737901 | 1067..1869 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 5616130..5616173 | 1..44 | 100 | <- | Plus |
arm_X | 5616241..5617076 | 45..880 | 100 | <- | Plus |
arm_X | 5617147..5617229 | 881..963 | 100 | <- | Plus |
arm_X | 5617293..5617395 | 964..1066 | 100 | <- | Plus |
arm_X | 5631132..5631934 | 1067..1869 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5730306..5731141 | 45..880 | 100 | <- | Plus |
X | 5731212..5731294 | 881..963 | 100 | <- | Plus |
X | 5731358..5731460 | 964..1066 | 100 | <- | Plus |
X | 5745197..5745999 | 1067..1869 | 100 | == | Plus |
X | 5730195..5730238 | 1..44 | 100 | <- | Plus |
Translation from 1240 to 1662
> GH08671.hyp MVTTRGPFAVVTPTPTPMTTAPPPPPPDDAVTTALAGVGVGRGWFSPTML IAPVVRSRSHSVVMAALLPPPHTPLHLLLLLRYCCCCCPFPTFLLSDSQQ RCVVCTISFVVLWLFRSFILRNVFCNFFSAHTQHNTHTHV*
Translation from 1943 to 2881
> GH08671.pep MRVGQLLRFRSTSLRSSTARQEYVPHHKPVVEDDIKRLEDFLLSKPNVLV LTGAGISTESGIPDYRSEGVGLYARSNHKPVQHMEFVKSSAVRKRYWARN FVGWPKFSATQPNATHHALARFEREERVQAVVTQNVDRLHTKAGSRNVVE VHGSGYVVKCLSCEYRIDRHEFQSILASLNPAFKDAPDMIRPDGDVEIPL EYIENFRIPECTQCGGDLKPEIVFFGDSVPRPRVDQIAGMVYNSDGLLVL GSSLLVFSGYRVVLQTKDLKLPVGIVNIGETRADHLADIKISAKCGDVIP KLFDFRNSKSVS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20910-PA | 312 | GF20910-PA | 1..312 | 1..312 | 1456 | 89.4 | Plus |
Dana\GF16275-PA | 762 | GF16275-PA | 107..348 | 30..305 | 218 | 27 | Plus |
Dana\GF23025-PA | 394 | GF23025-PA | 82..267 | 48..256 | 204 | 26.6 | Plus |
Dana\GF14221-PA | 835 | GF14221-PA | 229..445 | 40..256 | 196 | 29.4 | Plus |
Dana\GF17531-PA | 332 | GF17531-PA | 30..150 | 31..169 | 168 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18482-PA | 312 | GG18482-PA | 1..312 | 1..312 | 1633 | 97.8 | Plus |
Dere\GG11640-PA | 769 | GG11640-PA | 100..347 | 21..305 | 210 | 26.6 | Plus |
Dere\GG23867-PA | 385 | GG23867-PA | 80..265 | 48..256 | 199 | 25.7 | Plus |
Dere\GG23816-PA | 828 | GG23816-PA | 221..429 | 48..256 | 194 | 30 | Plus |
Dere\GG17292-PA | 325 | GG17292-PA | 29..144 | 30..163 | 158 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12046-PA | 304 | GH12046-PA | 1..304 | 1..310 | 1312 | 81.6 | Plus |
Dgri\GH18681-PA | 810 | GH18681-PA | 90..339 | 21..307 | 206 | 26.9 | Plus |
Dgri\GH11392-PA | 886 | GH11392-PA | 248..457 | 47..256 | 200 | 29.4 | Plus |
Dgri\GH13301-PA | 340 | GH13301-PA | 29..266 | 30..302 | 170 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sirt4-PC | 312 | CG3187-PC | 1..312 | 1..312 | 1620 | 100 | Plus |
Sirt4-PB | 229 | CG3187-PB | 1..229 | 84..312 | 1195 | 100 | Plus |
Sirt4-PA | 229 | CG3187-PA | 1..229 | 84..312 | 1195 | 100 | Plus |
Sirt1-PA | 823 | CG5216-PA | 224..432 | 48..256 | 196 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16299-PA | 303 | GI16299-PA | 1..300 | 1..306 | 1301 | 80.7 | Plus |
Dmoj\GI24191-PA | 802 | GI24191-PA | 88..337 | 21..307 | 217 | 27.8 | Plus |
Dmoj\GI10678-PA | 345 | GI10678-PA | 50..236 | 47..256 | 215 | 27.5 | Plus |
Dmoj\GI18096-PA | 891 | GI18096-PA | 239..455 | 40..256 | 199 | 28.9 | Plus |
Dmoj\GI18164-PA | 334 | GI18164-PA | 29..266 | 30..302 | 167 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18326-PA | 315 | GL18326-PA | 1..312 | 1..312 | 1348 | 81.4 | Plus |
Dper\GL24255-PA | 797 | GL24255-PA | 89..338 | 21..307 | 208 | 26.8 | Plus |
Dper\GL24742-PA | 864 | GL24742-PA | 228..444 | 40..256 | 193 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16538-PA | 315 | GA16538-PA | 1..312 | 1..312 | 1348 | 81.4 | Plus |
Dpse\GA10903-PA | 797 | GA10903-PA | 89..338 | 21..307 | 212 | 27.1 | Plus |
Dpse\GA18743-PA | 864 | GA18743-PA | 228..444 | 40..256 | 193 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12631-PA | 312 | GM12631-PA | 1..312 | 1..312 | 1635 | 98.7 | Plus |
Dsec\GM23107-PA | 386 | GM23107-PA | 81..266 | 48..256 | 200 | 26.3 | Plus |
Dsec\GM10169-PA | 824 | GM10169-PA | 221..429 | 48..256 | 199 | 30 | Plus |
Dsec\GM26176-PA | 325 | GM26176-PA | 30..144 | 31..163 | 155 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16246-PA | 312 | GD16246-PA | 1..312 | 1..312 | 1635 | 98.7 | Plus |
Dsim\GD19348-PA | 386 | GD19348-PA | 81..266 | 48..256 | 201 | 25.7 | Plus |
Dsim\GD23867-PA | 826 | GD23867-PA | 223..431 | 48..256 | 196 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16687-PA | 303 | GJ16687-PA | 1..302 | 1..308 | 1321 | 82.1 | Plus |
Dvir\GJ23031-PA | 345 | GJ23031-PA | 50..236 | 47..256 | 214 | 27.4 | Plus |
Dvir\GJ10538-PA | 800 | GJ10538-PA | 88..337 | 21..307 | 213 | 27.3 | Plus |
Dvir\GJ16866-PA | 860 | GJ16866-PA | 248..456 | 48..256 | 198 | 29.5 | Plus |
Dvir\GJ14596-PA | 340 | GJ14596-PA | 29..266 | 30..302 | 170 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19907-PA | 312 | GK19907-PA | 1..309 | 1..308 | 1413 | 86.7 | Plus |
Dwil\GK22445-PA | 354 | GK22445-PA | 51..236 | 48..256 | 209 | 28.1 | Plus |
Dwil\GK22570-PA | 778 | GK22570-PA | 86..346 | 8..307 | 206 | 26.1 | Plus |
Dwil\GK15314-PA | 795 | GK15314-PA | 211..427 | 40..256 | 206 | 29.8 | Plus |
Dwil\GK15262-PA | 337 | GK15262-PA | 26..152 | 27..171 | 172 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16799-PA | 312 | GE16799-PA | 1..312 | 1..312 | 1636 | 97.4 | Plus |
Dyak\GE23831-PA | 769 | GE23831-PA | 100..347 | 21..305 | 212 | 26.9 | Plus |
Dyak\GE25662-PA | 385 | GE25662-PA | 79..265 | 47..256 | 206 | 26.3 | Plus |
Dyak\GE18618-PA | 828 | GE18618-PA | 221..429 | 48..256 | 193 | 30 | Plus |
Dyak\GE24693-PA | 325 | GE24693-PA | 29..144 | 30..163 | 156 | 31.4 | Plus |