BDGP Sequence Production Resources |
Search the DGRC for GH08696
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 86 |
Well: | 96 |
Vector: | pOT2 |
Associated Gene/Transcript | wupA-RC |
Protein status: | GH08696.pep: gold |
Sequenced Size: | 939 |
Gene | Date | Evidence |
---|---|---|
wupA-RC | 2010-11-11 | Gleaning Pick By Joe Carlson |
939 bp assembled on 2010-12-14
GenBank Submission: BT125851.1
> GH08696.complete CGTTCAGTCTTTTTGTGTCGTTCAGTATCATCCGATTCGTGTGATCGACA GCATAGCCGAATTTTTTTTCTTTTTTTTCTAATTCCTTGAAGTAACCAAA AACACAAATCAAAATGGCTGATGATGAGGCTAAGAAGGCTAAACAGGCTG AGATCGAGCGCAAGCGTGCTGAGGTGCGCAAGCGCATGGAGGAAGCCTCC AAGGCCAAGAAGGCCAAGAAGGGTTTCATGACCCCAGAGAGGAAGAAGAA ACTCAGGTTGCTGCTGCGTAAGAAAGCCGCTGAGGAGCTGAAGAAAGAAC AGGAACGCAAAGCGGCTGAACGTAGACGCATCATCGAAGAACGTTGCGGC AGTCCCAGGAATCTCAGCGATGCCAGCGAAGGCGAATTGCAAGAGATTTG CGAAGAGTATTACGAGCGTATGTATATTTGTGAAGGCCAGAAATGGGATC TGGAATACGAAGTCAGGAAAAAAGACTGGGAGATCAACGATCTCAATGCC CAAGTTAACGATCTTCGCGGCAAGTTCGTCAAGCCAGCCCTGAAGAAGGT CTCCAAATACGAAAACAAATTCGCCAAGCTGCAGAAGAAGGCCGCTGAGT TCAACTTCCGCAACCAGCTCAAGGTGGTGAAGAAGAAGGAGTTCACGCTG GAGGAGGAGGAGAAGGAGAAGAAACCCGACTGGTCCAAGGGCAAGCCCGG AGATGCCAAGGTGAAGGAGGAGGTTGAGGCCGAAGCTTAAGTGTCCACAC GTCCACTAGTGTCCACTGACCCGTGACTCCCGCCCTAAACAATAATTGAA ATTATTTACAACAATTATCTGAAGCAATATAATTTATATGAATCTATTAA TATATATATATATCCGCAAATATATATGCATGTATATATCTCGCCATATA TATGTGTCCACAATGGAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 17995098..17995347 | 916..667 | 1250 | 100 | Minus |
chrX | 22417052 | chrX | 17995994..17996135 | 668..527 | 710 | 100 | Minus |
chrX | 22417052 | chrX | 18002767..18002897 | 257..127 | 655 | 100 | Minus |
chrX | 22417052 | chrX | 18002577..18002702 | 382..257 | 630 | 100 | Minus |
chrX | 22417052 | chrX | 17998792..17998894 | 482..380 | 515 | 100 | Minus |
chrX | 22417052 | chrX | 18006037..18006128 | 92..1 | 460 | 100 | Minus |
chrX | 22417052 | chrX | 17996201..17996246 | 526..481 | 230 | 100 | Minus |
chrX | 22417052 | chrX | 18003930..18003968 | 129..91 | 195 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 18105784..18106034 | 917..667 | 1255 | 100 | Minus |
X | 23542271 | X | 18106681..18106822 | 668..527 | 710 | 100 | Minus |
X | 23542271 | X | 18113447..18113577 | 257..127 | 655 | 100 | Minus |
X | 23542271 | X | 18113257..18113382 | 382..257 | 630 | 100 | Minus |
X | 23542271 | X | 18109470..18109572 | 482..380 | 515 | 100 | Minus |
X | 23542271 | X | 18116707..18116798 | 92..1 | 460 | 100 | Minus |
X | 23542271 | X | 18106888..18106933 | 526..481 | 230 | 100 | Minus |
X | 23542271 | X | 18114610..18114648 | 129..91 | 195 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 18113882..18114132 | 917..667 | 1255 | 100 | Minus |
X | 23527363 | X | 18114779..18114920 | 668..527 | 710 | 100 | Minus |
X | 23527363 | X | 18121545..18121675 | 257..127 | 655 | 100 | Minus |
X | 23527363 | X | 18121355..18121480 | 382..257 | 630 | 100 | Minus |
X | 23527363 | X | 18117568..18117670 | 482..380 | 515 | 100 | Minus |
X | 23527363 | X | 18124805..18124896 | 92..1 | 460 | 100 | Minus |
X | 23527363 | X | 18114986..18115031 | 526..481 | 230 | 100 | Minus |
X | 23527363 | X | 18122708..18122746 | 129..91 | 195 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 18006037..18006128 | 1..92 | 100 | Minus | |
chrX | 17998792..17998892 | 382..482 | 100 | <- | Minus |
chrX | 18002578..18002701 | 258..381 | 100 | <- | Minus |
chrX | 18002767..18002895 | 129..257 | 100 | <- | Minus |
chrX | 18003931..18003966 | 93..128 | 100 | <- | Minus |
chrX | 17995191..17995345 | 669..823 | 100 | <- | Minus |
chrX | 17995994..17996135 | 527..668 | 100 | <- | Minus |
chrX | 17996201..17996244 | 483..526 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RF | 1..627 | 114..740 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RC | 1..627 | 114..740 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RC | 1..627 | 114..740 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RC | 25..940 | 1..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RC | 28..943 | 1..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RC | 28..943 | 1..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18105785..18106032 | 669..916 | 100 | <- | Minus |
X | 18106681..18106822 | 527..668 | 100 | <- | Minus |
X | 18106888..18106931 | 483..526 | 100 | <- | Minus |
X | 18109470..18109570 | 382..482 | 100 | <- | Minus |
X | 18113258..18113381 | 258..381 | 100 | <- | Minus |
X | 18113447..18113575 | 129..257 | 100 | <- | Minus |
X | 18114611..18114646 | 93..128 | 100 | <- | Minus |
X | 18116707..18116798 | 1..92 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18105785..18106032 | 669..916 | 100 | <- | Minus |
X | 18106681..18106822 | 527..668 | 100 | <- | Minus |
X | 18106888..18106931 | 483..526 | 100 | <- | Minus |
X | 18109470..18109570 | 382..482 | 100 | <- | Minus |
X | 18113258..18113381 | 258..381 | 100 | <- | Minus |
X | 18113447..18113575 | 129..257 | 100 | <- | Minus |
X | 18114611..18114646 | 93..128 | 100 | <- | Minus |
X | 18116707..18116798 | 1..92 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18105785..18106032 | 669..916 | 100 | <- | Minus |
X | 18106681..18106822 | 527..668 | 100 | <- | Minus |
X | 18106888..18106931 | 483..526 | 100 | <- | Minus |
X | 18109470..18109570 | 382..482 | 100 | <- | Minus |
X | 18113258..18113381 | 258..381 | 100 | <- | Minus |
X | 18113447..18113575 | 129..257 | 100 | <- | Minus |
X | 18114611..18114646 | 93..128 | 100 | <- | Minus |
X | 18116707..18116798 | 1..92 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18000921..18000964 | 483..526 | 100 | <- | Minus |
arm_X | 18003503..18003603 | 382..482 | 100 | <- | Minus |
arm_X | 18007291..18007414 | 258..381 | 100 | <- | Minus |
arm_X | 18007480..18007608 | 129..257 | 100 | <- | Minus |
arm_X | 18008644..18008679 | 93..128 | 100 | <- | Minus |
arm_X | 18010740..18010831 | 1..92 | 100 | Minus | |
arm_X | 17999818..18000065 | 669..916 | 100 | <- | Minus |
arm_X | 18000714..18000855 | 527..668 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18113883..18114130 | 669..916 | 100 | <- | Minus |
X | 18114779..18114920 | 527..668 | 100 | <- | Minus |
X | 18114986..18115029 | 483..526 | 100 | <- | Minus |
X | 18117568..18117668 | 382..482 | 100 | <- | Minus |
X | 18121356..18121479 | 258..381 | 100 | <- | Minus |
X | 18121545..18121673 | 129..257 | 100 | <- | Minus |
X | 18122709..18122744 | 93..128 | 100 | <- | Minus |
X | 18124805..18124896 | 1..92 | 100 | Minus |
Translation from 113 to 739
> GH08696.hyp MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLL LRKKAAEELKKEQERKAAERRRIIEERCGSPRNLSDASEGELQEICEEYY ERMYICEGQKWDLEYEVRKKDWEINDLNAQVNDLRGKFVKPALKKVSKYE NKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPDWSKGKPGDAKV KEEVEAEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wupA-PF | 208 | CG7178-PF | 1..208 | 1..208 | 1063 | 100 | Plus |
wupA-PC | 208 | CG7178-PC | 1..208 | 1..208 | 1063 | 100 | Plus |
wupA-PG | 269 | CG7178-PG | 65..269 | 4..208 | 1044 | 99.5 | Plus |
wupA-PE | 208 | CG7178-PE | 1..208 | 1..208 | 952 | 91.3 | Plus |
wupA-PD | 208 | CG7178-PD | 1..208 | 1..208 | 952 | 91.3 | Plus |
Translation from 113 to 739
> GH08696.pep MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLL LRKKAAEELKKEQERKAAERRRIIEERCGSPRNLSDASEGELQEICEEYY ERMYICEGQKWDLEYEVRKKDWEINDLNAQVNDLRGKFVKPALKKVSKYE NKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPDWSKGKPGDAKV KEEVEAEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19521-PA | 272 | GF19521-PA | 69..272 | 5..208 | 725 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18142-PA | 269 | GG18142-PA | 66..269 | 5..208 | 728 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11970-PA | 282 | GH11970-PA | 78..282 | 4..208 | 1028 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wupA-PF | 208 | CG7178-PF | 1..208 | 1..208 | 1063 | 100 | Plus |
wupA-PC | 208 | CG7178-PC | 1..208 | 1..208 | 1063 | 100 | Plus |
wupA-PG | 269 | CG7178-PG | 65..269 | 4..208 | 1044 | 99.5 | Plus |
wupA-PE | 208 | CG7178-PE | 1..208 | 1..208 | 952 | 91.3 | Plus |
wupA-PD | 208 | CG7178-PD | 1..208 | 1..208 | 952 | 91.3 | Plus |
wupA-PB | 208 | CG7178-PB | 1..208 | 1..208 | 950 | 89.4 | Plus |
wupA-PA | 208 | CG7178-PA | 1..208 | 1..208 | 941 | 90.4 | Plus |
wupA-PH | 260 | CG7178-PH | 65..248 | 4..187 | 931 | 99.5 | Plus |
wupA-PI | 199 | CG7178-PI | 1..187 | 1..187 | 839 | 90.4 | Plus |
wupA-PJ | 199 | CG7178-PJ | 1..187 | 1..187 | 828 | 89.3 | Plus |
wupA-PM | 184 | CG7178-PM | 1..184 | 25..208 | 826 | 89.1 | Plus |
wupA-PL | 184 | CG7178-PL | 1..184 | 25..208 | 826 | 89.1 | Plus |
wupA-PK | 184 | CG7178-PK | 1..184 | 25..208 | 826 | 89.1 | Plus |
up-PM | 373 | CG7107-PM | 75..300 | 3..196 | 149 | 25.1 | Plus |
up-PL | 388 | CG7107-PL | 90..315 | 3..196 | 149 | 26 | Plus |
up-PN | 394 | CG7107-PN | 96..321 | 3..196 | 149 | 26 | Plus |
up-PK | 396 | CG7107-PK | 98..323 | 3..196 | 149 | 26 | Plus |
up-PG | 396 | CG7107-PG | 98..323 | 3..196 | 149 | 26 | Plus |
up-PT | 306 | CG7107-PT | 7..233 | 3..196 | 148 | 25.9 | Plus |
up-PD | 306 | CG7107-PD | 7..233 | 3..196 | 148 | 25.9 | Plus |
up-PH | 374 | CG7107-PH | 75..301 | 3..196 | 148 | 25 | Plus |
up-PE | 374 | CG7107-PE | 75..301 | 3..196 | 148 | 25.9 | Plus |
up-PQ | 388 | CG7107-PQ | 89..315 | 3..196 | 148 | 25.9 | Plus |
up-PS | 388 | CG7107-PS | 89..315 | 3..196 | 148 | 25.9 | Plus |
up-PR | 388 | CG7107-PR | 89..315 | 3..196 | 148 | 25.9 | Plus |
up-PJ | 389 | CG7107-PJ | 90..316 | 3..196 | 148 | 25 | Plus |
up-PB | 389 | CG7107-PB | 90..316 | 3..196 | 148 | 25.9 | Plus |
up-PP | 396 | CG7107-PP | 97..323 | 3..196 | 148 | 25.9 | Plus |
up-PO | 397 | CG7107-PO | 98..324 | 3..196 | 148 | 25.9 | Plus |
up-PI | 397 | CG7107-PI | 98..324 | 3..196 | 148 | 25 | Plus |
up-PA | 397 | CG7107-PA | 98..324 | 3..196 | 148 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14711-PA | 277 | GI14711-PA | 73..277 | 4..208 | 1027 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14173-PA | 267 | GL14173-PA | 63..267 | 4..208 | 736 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\TpnI-PA | 267 | GA22383-PA | 63..267 | 4..208 | 736 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22835-PA | 224 | GM22835-PA | 66..224 | 5..208 | 509 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24482-PA | 98 | GD24482-PA | 13..98 | 6..91 | 399 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\wupA-PA | 274 | GJ16776-PA | 70..274 | 4..208 | 1022 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24919-PA | 272 | GK24919-PA | 68..272 | 4..208 | 1024 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\wupA-PA | 270 | GE15552-PA | 66..270 | 4..208 | 733 | 90.7 | Plus |