BDGP Sequence Production Resources |
Search the DGRC for GH08708
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 87 |
Well: | 8 |
Vector: | pOT2 |
Associated Gene/Transcript | Pex5-RA |
Protein status: | GH08708.pep: gold |
Preliminary Size: | 1680 |
Sequenced Size: | 2176 |
Gene | Date | Evidence |
---|---|---|
CG14815 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14815 | 2002-05-18 | Blastp of sequenced clone |
CG14815 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14815 | 2008-04-29 | Release 5.5 accounting |
CG14815 | 2008-08-15 | Release 5.9 accounting |
CG14803 | 2008-08-15 | Release 5.9 accounting |
CG14815 | 2008-12-18 | 5.12 accounting |
CG14803 | 2008-12-18 | 5.12 accounting |
2176 bp (2176 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118757
> GH08708.complete GCAAGTGTAGACCGTCGACTAGGTCCTCTTCGCTATCGTCCACGTCTATT TGCGCGCTCAGGGTTTCCTGCTTCTGTGTCGCCTGTATGAAGGTAGCCAG GATCTCCTCGTCATCCGACTGAAAAAGGTCGTAGTCCATGGTGCAGTCGG GGATTTGGCGTTCGAAACCAATTCTCTGGCGGATAAGATTTTGCGCGGCG ATATATTTTATTATTATTAGAGCGCTGTGCAACACTGTCACAAAGCCGAT AGCTTCGATAACGGCCGATAAACAGTTACGTAGCATCTCCACTTCGAACA CCATGTCTTTCCGCCCATTGGTCGAGGGCGACTGCGGTGGAGTTAATCCT CTCATGCAACTGGGCGGACAGTTCACCCGCGATGTTGCCCACAAGGATGA GGGCTATGTGCAGCGACACTTCGAGCGCGCTGCTCGTCCCGAGGACCAGT TGATCAACGAGTTCCTGGGACAGGTCACTGCCCCACCGCAGTCATTTCAG ATGGACACTCTGCTCCAGGAGATGCGGGACATAAATATTCACGGAAATCC GCAGCAGCAGATGCACTCTCAGCAGGCGGAGCAGTGGGGACAGGACTTTG CCCGCGGACTGGCACCCGCCCTGCCCAACAAGATGATCCACATGCAGGCA CAGCAGCAGGACCTGCAGCATGCCCAGGAGTTCTTCGACGAGCCCCTGAT CAGTAGCCAGAACTTTCGGTCCCTGCCGCCATTGCGTCAGCCTTTGATGC CCATTGCGGCAGGACAGCAACAGGACCCCTTCTTTGACTCCGCCATGGAA ACTATAATCACAGATCATCTGCCACAGGCGCCACAGGGGGAATCGCTGGA CGACTGGATCAGCGACTACCAGCGCAGCACCGAACAAAAAGAGCAAACCG CCGCCAACTTCAACGAAAAGTTCTGGGAGCGGCTGCAAGACGAGTGGCAG AAGCTGGCCGACGAGAACGAGCATCCGTGGCTGTCGGAGTACAACGACAA TATGGACGCTTATAAGGAGTACGAGTTCGCCGAGGGCAACCCCATGTCTG ATGTGGAGAACCCGTTTGAAAAGGGTAAGGAGTACCTGTCCAAAGGGGAT ATACCCAGCGCAGTTCTATGTTTCGAGGTGGCGGCCAAAAAGCAACCGGA GCGCGCTGAGGTCTGGCAGTTGCTGGGCACTTCGCAGACAGAGAACGAAA TGGATCCCCAGGCCATTGCGGCACTTAAGCGGGCTTACGACTTGCAACCG GACAACCAACAGGTCCTGATGGCCCTGGCCGCGTGCTACACCAACGAGGG CCTGCAGAACAACGCCGTGCGCATGCTGTGCAACTGGCTGACAGTGCATC CCAAGTATCAGCACCTGGTCGCAGCCCATCCGGAGCTGCAGGCCGAGGGC ACTTCGTTGGCTTCGTCGCTGATTGGTCCGAGTAAGCTGCGCGATCTGCA GCAGATCTACTTGGAAGCCGTTCGACAGCACCCTTCGGAGGTGGATGCCG AAGTCCAGGATGCCCTCGGCGTGCTCTACAATCTATCTGGGGAGTTCGAC AAGGCGGTGGACTGCTACCAGTCCGCTCTGCAGGTGGATCCCCAAAATGC GAAGACATGGAACCGATTGGGGGCCAGTTTGGCCAACGGCTCGCGCTCCG TGGAGGCGGTGGAGGCTTATCAGCAGGCGCTGCAGCTCCAACCGGGCTTC ATCCGTGTGCGTTACAACGTGGGCGTATGTTGCATGAACCTTAAGGCCTA CAAGGAAGCTGTGGAGCACTTACTCACAGCGCTTACCATGCAGGCTCACA CTAACGCCGCCCGAGAGCTGCCCAATGCGGCGATGGCGGCTACCTTTAGA GGACAGAACCAGATGTCCGAGTCTATTTGGAGTACGCTGAAGATGGTCAT TTCGCTGATGGGCCGCAGCGATCTCCAGAGTTATGTGAGCGATCGCAATC TGGCGGCTCTTAATGAGGCCTTTAAGGATTAACCGCCCCGCAGCTTCTTT ATCACTGCTTTGGGAAAGTCCGTTGTTGTCGTGTCATGTGGGTGTGTAAG GTTGAATTTGAGATATTTTTTACTCTGGCAGTGTAATCATTCCCTCTCGG TTCTTTTCTGTAAATTTGTATATTTTCTTACATTTAAGAAATTAAATAAC TGTTGGATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 684..787 | 2144..2036 | 118 | 60.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1760675..1762557 | 276..2158 | 100 | <- | Minus |
chrX | 1762630..1762904 | 1..275 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14815-RA | 1..1845 | 138..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14815-RA | 1..1845 | 138..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pex5-RA | 1..1845 | 138..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14815-RA | 1..1845 | 138..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pex5-RA | 1..1845 | 138..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14815-RA | 1..2158 | 1..2158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14815-RA | 1..2158 | 1..2158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pex5-RA | 1..2158 | 1..2158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14815-RA | 1..2158 | 1..2158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pex5-RA | 1..2158 | 1..2158 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1866832..1868714 | 276..2158 | 100 | <- | Minus |
X | 1868787..1869061 | 1..275 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1866832..1868714 | 276..2158 | 100 | <- | Minus |
X | 1868787..1869061 | 1..275 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1866832..1868714 | 276..2158 | 100 | <- | Minus |
X | 1868787..1869061 | 1..275 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1762820..1763094 | 1..275 | 100 | Minus | |
arm_X | 1760865..1762747 | 276..2158 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1874930..1876812 | 276..2158 | 100 | <- | Minus |
X | 1876885..1877159 | 1..275 | 100 | Minus |
Translation from 137 to 1981
> GH08708.pep MVQSGIWRSKPILWRIRFCAAIYFIIIRALCNTVTKPIASITADKQLRSI STSNTMSFRPLVEGDCGGVNPLMQLGGQFTRDVAHKDEGYVQRHFERAAR PEDQLINEFLGQVTAPPQSFQMDTLLQEMRDINIHGNPQQQMHSQQAEQW GQDFARGLAPALPNKMIHMQAQQQDLQHAQEFFDEPLISSQNFRSLPPLR QPLMPIAAGQQQDPFFDSAMETIITDHLPQAPQGESLDDWISDYQRSTEQ KEQTAANFNEKFWERLQDEWQKLADENEHPWLSEYNDNMDAYKEYEFAEG NPMSDVENPFEKGKEYLSKGDIPSAVLCFEVAAKKQPERAEVWQLLGTSQ TENEMDPQAIAALKRAYDLQPDNQQVLMALAACYTNEGLQNNAVRMLCNW LTVHPKYQHLVAAHPELQAEGTSLASSLIGPSKLRDLQQIYLEAVRQHPS EVDAEVQDALGVLYNLSGEFDKAVDCYQSALQVDPQNAKTWNRLGASLAN GSRSVEAVEAYQQALQLQPGFIRVRYNVGVCCMNLKAYKEAVEHLLTALT MQAHTNAARELPNAAMAATFRGQNQMSESIWSTLKMVISLMGRSDLQSYV SDRNLAALNEAFKD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21075-PA | 565 | GF21075-PA | 1..565 | 56..614 | 2457 | 82.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12676-PA | 557 | GG12676-PA | 1..557 | 56..614 | 2909 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24299-PA | 559 | GH24299-PA | 1..559 | 56..614 | 2192 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pex5-PA | 614 | CG14815-PA | 1..614 | 1..614 | 3213 | 100 | Plus |
Pex5-PB | 559 | CG14815-PB | 1..559 | 56..614 | 2932 | 100 | Plus |
sxc-PB | 1059 | CG10392-PB | 227..465 | 313..558 | 167 | 24.7 | Plus |
sxc-PA | 1059 | CG10392-PA | 227..465 | 313..558 | 167 | 24.7 | Plus |
sxc-PC | 1059 | CG10392-PC | 227..465 | 313..558 | 167 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11045-PA | 476 | GI11045-PA | 1..456 | 56..504 | 1577 | 64.9 | Plus |
Dmoj\GI11045-PA | 476 | GI11045-PA | 262..476 | 461..614 | 259 | 35.8 | Plus |
Dmoj\GI18858-PA | 1052 | GI18858-PA | 219..457 | 313..558 | 161 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20216-PA | 552 | GL20216-PA | 1..552 | 56..614 | 2581 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13268-PA | 552 | GA13268-PA | 1..552 | 56..614 | 2573 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18948-PA | 614 | GM18948-PA | 1..614 | 1..614 | 3217 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24623-PA | 237 | GD24623-PA | 1..237 | 378..614 | 1247 | 98.7 | Plus |
Dsim\GD24622-PA | 215 | GD24622-PA | 1..195 | 1..195 | 1007 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17042-PA | 553 | GJ17042-PA | 1..553 | 56..614 | 2310 | 76.8 | Plus |
Dvir\GJ20442-PA | 1050 | GJ20442-PA | 218..456 | 313..558 | 156 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25053-PA | 574 | GK25053-PA | 3..574 | 57..614 | 2181 | 75.4 | Plus |
Dwil\GK21381-PA | 1059 | GK21381-PA | 224..462 | 313..558 | 155 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16506-PA | 557 | GE16506-PA | 1..557 | 56..614 | 2904 | 96.6 | Plus |
Translation from 137 to 1981
> GH08708.hyp MVQSGIWRSKPILWRIRFCAAIYFIIIRALCNTVTKPIASITADKQLRSI STSNTMSFRPLVEGDCGGVNPLMQLGGQFTRDVAHKDEGYVQRHFERAAR PEDQLINEFLGQVTAPPQSFQMDTLLQEMRDINIHGNPQQQMHSQQAEQW GQDFARGLAPALPNKMIHMQAQQQDLQHAQEFFDEPLISSQNFRSLPPLR QPLMPIAAGQQQDPFFDSAMETIITDHLPQAPQGESLDDWISDYQRSTEQ KEQTAANFNEKFWERLQDEWQKLADENEHPWLSEYNDNMDAYKEYEFAEG NPMSDVENPFEKGKEYLSKGDIPSAVLCFEVAAKKQPERAEVWQLLGTSQ TENEMDPQAIAALKRAYDLQPDNQQVLMALAACYTNEGLQNNAVRMLCNW LTVHPKYQHLVAAHPELQAEGTSLASSLIGPSKLRDLQQIYLEAVRQHPS EVDAEVQDALGVLYNLSGEFDKAVDCYQSALQVDPQNAKTWNRLGASLAN GSRSVEAVEAYQQALQLQPGFIRVRYNVGVCCMNLKAYKEAVEHLLTALT MQAHTNAARELPNAAMAATFRGQNQMSESIWSTLKMVISLMGRSDLQSYV SDRNLAALNEAFKD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pex5-PA | 614 | CG14815-PA | 1..614 | 1..614 | 3213 | 100 | Plus |
Pex5-PB | 559 | CG14815-PB | 1..559 | 56..614 | 2932 | 100 | Plus |
sxc-PB | 1059 | CG10392-PB | 227..465 | 313..558 | 167 | 24.7 | Plus |
sxc-PA | 1059 | CG10392-PA | 227..465 | 313..558 | 167 | 24.7 | Plus |
sxc-PC | 1059 | CG10392-PC | 227..465 | 313..558 | 167 | 24.7 | Plus |