BDGP Sequence Production Resources |
Search the DGRC for GH08712
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 87 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | Snr1-RA |
Protein status: | GH08712.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1353 |
Gene | Date | Evidence |
---|---|---|
CG1064 | 2001-01-01 | Release 2 assignment |
CG1064 | 2001-12-12 | Blastp of sequenced clone |
CG1064 | 2003-01-01 | Sim4 clustering to Release 3 |
Snr1 | 2008-04-29 | Release 5.5 accounting |
Snr1 | 2008-08-15 | Release 5.9 accounting |
Snr1 | 2008-12-18 | 5.12 accounting |
1353 bp (1353 high quality bases) assembled on 2001-12-12
GenBank Submission: AY070501
> GH08712.complete TTTGTGTATGCGCCAAGAAAATTTAAGTCGCGGAATATTAACAAGGAATC CCTGCCAGAAACAGGGCATTGAGAGACCACAGAAGAAAATATACCCAACA TGGCACTGCAGACATACGGGGACAAGCCGGTGGCCTTCCAGCTGGAGGAG GGCGGCGAGTACTACTACGTGGGCTCGGAAGTGGGCAACTACATGCGCCA CTTCCGCGGCATTCTGTACAAGAAGTACCCGGGAATGACCCGCATCGTCC TGTCCAACGAGGAGCGCAAGCGGCTGGCTGAGTCCGGCCTCAGCTCCCAC ATCTTAGCCAGCTCTGTATCGCTGCTCCGCGCCGTAGAGGTGGATGATAT CATGGCCGGCAACGATGAAAAGTATCGCGCCGTCTCCGTGAACACTTCCG ATACGCCAGTGCCGCGGGAGAGCAAGTCAAAGAAGCAGCCACAGTATGTG CCCACGATGCCGAACTCCAGCCACCTGGACGCAGTGCCACAGGCCACGCC AATCAACCGAAACCGAGTGCACACGAAGAAGGTTCGCACATTCCCGATGT GTTTCGACGACACGGATCCCACGGCTAGCCTGGAGAATGCGGCGCAGAAG GAGTGCCTGGTGCCCATTCGACTGGACATGGAGCTAGAGGGTCAAAAGCT GCGCGACACCTTCACGTGGAACAAGAACGAGAGCATGATTACTCCGGAGC AGTTTGCCGAGGTGCTGTGCGACGACCTGGACCTCAATCCCCTGCCCTTT GTGCCGGCTATTGCACAGGCCATCCGACAGCAGATCGAAGCCTTTCCCAA CGATCCCCCCATCCTCGAGGAGACCTGCGACCAGCGGGTCATTGTTAAGC TGAACATTCACGTGGGCAACACCTCGCTCGTCGACCAGGTCGAGTGGGAC ATGTCCGAGAAGAACAACAACCCCGAGGAGTTTGCCATTAAACTCTGTGC GGAATTGGGATTGGGAGGAGAGTTTGTTACGGCCATTGCCTACAGCATTA GGGGTCAGCTATCGTGGCACTGTCGAACGTACGCCTTCAGCGAGGCCCCT CTATCAACGATTGATGTGCCCTTCCGGAATCCCAGCGACGCTGACGCATG GGCGCCATTCCTAGAGACGCTTACCGACGCCGAAATGGAGAAGAAAATCC GCGACCAGGACCGCAACACGCGCAGAATGCGACGACTGGCCAATACCACA ACTGGTTGGTGATCTTCCGCCGATCCAGCAATGTGTCACTAATGTAATCC TCCTATTAAGTACCATTATGCATCCCAAATAAATGTGTGTCTGTCGATTT TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Snr1-RA | 1466 | Snr1-RA | 152..1456 | 1..1305 | 6525 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1297484..1298413 | 372..1301 | 100 | Plus | |
chr3R | 1296619..1296989 | 1..371 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snr1-RA | 1..1113 | 100..1212 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snr1-RA | 1..1113 | 100..1212 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snr1-RA | 1..1113 | 100..1212 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snr1-RA | 1..1113 | 100..1212 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snr1-RA | 1..1113 | 100..1212 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snr1-RA | 44..1344 | 1..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snr1-RA | 44..1344 | 1..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snr1-RA | 35..1335 | 1..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snr1-RA | 44..1344 | 1..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snr1-RA | 35..1335 | 1..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5470960..5471330 | 1..371 | 100 | -> | Plus |
3R | 5471825..5472754 | 372..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5470960..5471330 | 1..371 | 100 | -> | Plus |
3R | 5471825..5472754 | 372..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5470960..5471330 | 1..371 | 100 | -> | Plus |
3R | 5471825..5472754 | 372..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1296682..1297052 | 1..371 | 100 | -> | Plus |
arm_3R | 1297547..1298476 | 372..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5212656..5213585 | 372..1301 | 100 | Plus | |
3R | 5211791..5212161 | 1..371 | 100 | -> | Plus |
Translation from 99 to 1211
> GH08712.pep MALQTYGDKPVAFQLEEGGEYYYVGSEVGNYMRHFRGILYKKYPGMTRIV LSNEERKRLAESGLSSHILASSVSLLRAVEVDDIMAGNDEKYRAVSVNTS DTPVPRESKSKKQPQYVPTMPNSSHLDAVPQATPINRNRVHTKKVRTFPM CFDDTDPTASLENAAQKECLVPIRLDMELEGQKLRDTFTWNKNESMITPE QFAEVLCDDLDLNPLPFVPAIAQAIRQQIEAFPNDPPILEETCDQRVIVK LNIHVGNTSLVDQVEWDMSEKNNNPEEFAIKLCAELGLGGEFVTAIAYSI RGQLSWHCRTYAFSEAPLSTIDVPFRNPSDADAWAPFLETLTDAEMEKKI RDQDRNTRRMRRLANTTTGW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17254-PA | 370 | GF17254-PA | 1..370 | 1..370 | 1996 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12837-PA | 370 | GG12837-PA | 1..370 | 1..370 | 1999 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18597-PA | 370 | GH18597-PA | 1..370 | 1..370 | 1992 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Snr1-PA | 370 | CG1064-PA | 1..370 | 1..370 | 1942 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23079-PA | 370 | GI23079-PA | 1..370 | 1..370 | 1996 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21665-PA | 370 | GL21665-PA | 1..370 | 1..370 | 1996 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26364-PA | 370 | GA26364-PA | 1..370 | 1..370 | 1996 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10810-PA | 370 | GM10810-PA | 1..370 | 1..370 | 2003 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19788-PA | 370 | GD19788-PA | 1..370 | 1..370 | 2003 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22699-PA | 370 | GJ22699-PA | 1..370 | 1..370 | 1996 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11225-PA | 369 | GK11225-PA | 1..369 | 1..370 | 1958 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25470-PA | 370 | GE25470-PA | 1..370 | 1..370 | 1999 | 99.7 | Plus |
Translation from 99 to 1211
> GH08712.hyp MALQTYGDKPVAFQLEEGGEYYYVGSEVGNYMRHFRGILYKKYPGMTRIV LSNEERKRLAESGLSSHILASSVSLLRAVEVDDIMAGNDEKYRAVSVNTS DTPVPRESKSKKQPQYVPTMPNSSHLDAVPQATPINRNRVHTKKVRTFPM CFDDTDPTASLENAAQKECLVPIRLDMELEGQKLRDTFTWNKNESMITPE QFAEVLCDDLDLNPLPFVPAIAQAIRQQIEAFPNDPPILEETCDQRVIVK LNIHVGNTSLVDQVEWDMSEKNNNPEEFAIKLCAELGLGGEFVTAIAYSI RGQLSWHCRTYAFSEAPLSTIDVPFRNPSDADAWAPFLETLTDAEMEKKI RDQDRNTRRMRRLANTTTGW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Snr1-PA | 370 | CG1064-PA | 1..370 | 1..370 | 1942 | 100 | Plus |