GH08754.complete Sequence
1912 bp assembled on 2010-01-08
GenBank Submission: BT120109.1
> GH08754.complete
AACAACACGCAACGACGATATATCCGAACCAAAATCCAACGAACAATTCT
ATTTGAAAACTCTCAAAGCATCCAAATCTAAAAATCTCAACATGGTTTAC
GAAAGTGGATTTACGACCCGCAGAACCTACTCCTCGAGGCCGGTGACAAC
TTCCTACGCAGTTACGAGAACGAAGAGAACACCAATTGACTGGGAGAAAG
TTCCGTTCGTGCCGCGGCCGTCGCTCATCTCGGATCCGGTGACCGCCTTC
GGAGTGCGGCGTCCCGATCTCGAGCGGCGCCAGCGGTCGATCCTCGATCC
GATCAATCGGGCCTCCATCAAGCCCGACTACAAGCTGGCCTACGAGCCCA
TTGAGCCGTATGTCTCCACCCGGGACAAGAACCGGACGCGGATCCTGGGC
ATGGTGCGCCAGCACATCGACACCGTGGAGGCGGGTGGCAATACCGCCGG
CCGCACCTTCCGCGACAGTCTGGACGCCCAGCTGCCGCGACTCCATCGCG
CCGTCTCCGAGTCCTTGCCAGTTCGCCGGGAGACCTACCGCAACGAGAGG
TCGGGCGCGATGGTCACCAAGTACTCCTACTAGGGGAGCATCATCCTATT
CACCCAACCGATAACCCGAACCCAATCGAAGCCTAGTCGAACGAACCTAG
TCGTATCTAAGGACACATAACCAACTAAAACAGACAAAAAAAAAACTGAA
AATGCATTCAAAATAATGATAGGCCTACATATAGTCTAGCCATAGTCCAT
ATAATCTTGTGTTAACCCACTAAACACTGAACAAGTTTTTACTCTACACA
GAGAAAAAGTAGAACTTTTAGACATTCTATCCAGAATACGTTGTAATCGA
AATATTTCCATTTTAGCAGTACGCTCTATAGAAATTGTTCAATGAGATTC
CAACTACAAACGGTCAGTGCTTTTTTCTCTGTGTACCCATGTATCTAACG
TTTCATTCATAGACTCATAGCATTTGTGTGCATAGATGGTTGCATTAAGC
TCTTAACTCTAAAGTAAAACAGTTCGAACATGTTTCAATTTCCCCAATTG
AGTCGCCTTGCGTTCTTTGGCCATTTGCATACAGCAGTTCGTGGAGCAGC
AGGAGCAAGTTTAATCCTTTTATGATGCTTGTGCTGCCAATGCCGAAATA
GAAACCAAAACCAAAACCAAACCAAACCTTATCTCTATATCACTATCAAA
TCGGAATTTATAGACTCCACGCTTAGACCTGTGCACGGACAGACCGGGCT
CGCACCGCAGCCGGGCCTCCTCGGACTACTCGTACACCTCGAAGTCGTCC
GTGGAGAAGAGCAGCTACGACTCGAGCAACCCGCACTCGTACCGCCCGGA
GCGCTCCACGTACACGTCGACTGTGGAGAAGACGTCGCGCAGCGGTCCCG
GCGGCTCGTACAACTACAGCACAGAGCGGACCAGCACCACTGGCGCCGGA
CCCGGTGGCTACAGCTATTCTTCGACCACCAGCGGCAACCTGCCCGGCGG
CACCAAGTACCGCCACTTCTCCTACCACGTGTAGGAGACGCACAGCGTCA
AAGGATCGGCGTTGGCTGTCCACGGCTTTGAATGTTATGGTGCCCACTAA
TACGTCATTGTTCTGAATTTATATATATATATAAATATATACATTTTGCA
AATAATCCACTTAACCCGCTAACCTTGAGTGCCCATATATATATATATAT
ATTTGTATACGAAGTTTTCAATGATGATGTATTTTCGTTTTGACTTGGAC
TAATCACCACTAATGCCCAAATAGTTTCGCATATAGACTAGATTAACCGA
ACAAGATCAACAATTTCTGTGTGTATTTGCAACCTTCAAGAAGTCATGTT
AAAACATATTTGTGATACAATAAAATAAACACGGTCTTATCTCAAAAAAA
AAAAAAAAAAAA
GH08754.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:33:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fau.j | 2101 | fau.j | 67..1962 | 1..1896 | 9480 | 100 | Plus |
fau.h | 949 | fau.h | 252..949 | 1..698 | 3490 | 100 | Plus |
fau.d | 1364 | fau.d | 542..1225 | 1213..1896 | 3420 | 100 | Plus |
fau.d | 1364 | fau.d | 377..543 | 1..167 | 835 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:42:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 6598859..6600586 | 1893..166 | 8640 | 100 | Minus |
chr3R | 27901430 | chr3R | 6602697..6602862 | 166..1 | 830 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:39:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:42:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10773336..10775066 | 1896..166 | 8655 | 100 | Minus |
3R | 32079331 | 3R | 10777177..10777342 | 166..1 | 830 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:50:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 10514167..10515897 | 1896..166 | 8655 | 100 | Minus |
3R | 31820162 | 3R | 10518008..10518173 | 166..1 | 830 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 18:42:57 has no hits.
GH08754.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:44:11 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 6598859..6600585 | 167..1893 | 98 | <- | Minus |
chr3R | 6602697..6602862 | 1..166 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-01-08 11:04:09 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fau-RB | 1..492 | 92..583 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:52:07 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fau-RB | 1..492 | 92..583 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:50:29 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fau-RB | 1..492 | 92..583 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:47:39 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG45078-RA | 1..492 | 92..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-08 11:04:09 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fau-RB | 20..707 | 1..688 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:52:07 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fau-RB | 27..714 | 1..688 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:29 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fau-RB | 33..1925 | 1..1893 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:47:39 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG45078-RA | 33..1925 | 1..1893 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:44:11 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10777177..10777342 | 1..166 | 100 | | Minus |
3R | 10773339..10775065 | 167..1893 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:44:11 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10777177..10777342 | 1..166 | 100 | | Minus |
3R | 10773339..10775065 | 167..1893 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:44:11 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10777177..10777342 | 1..166 | 100 | | Minus |
3R | 10773339..10775065 | 167..1893 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:29 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6599061..6600787 | 167..1893 | 100 | <- | Minus |
arm_3R | 6602899..6603064 | 1..166 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:28:15 Download gff for
GH08754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10514170..10515896 | 167..1893 | 100 | <- | Minus |
3R | 10518008..10518173 | 1..166 | 100 | | Minus |
GH08754.hyp Sequence
Translation from 1 to 582
> GH08754.hyp
TTRNDDISEPKSNEQFYLKTLKASKSKNLNMVYESGFTTRRTYSSRPVTT
SYAVTRTKRTPIDWEKVPFVPRPSLISDPVTAFGVRRPDLERRQRSILDP
INRASIKPDYKLAYEPIEPYVSTRDKNRTRILGMVRQHIDTVEAGGNTAG
RTFRDSLDAQLPRLHRAVSESLPVRRETYRNERSGAMVTKYSY*
GH08754.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:19:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG45078-PA | 163 | CG45078-PA | 1..163 | 31..193 | 842 | 100 | Plus |
GH08754.pep Sequence
Translation from 1 to 582
> GH08754.pep
TTRNDDISEPKSNEQFYLKTLKASKSKNLNMVYESGFTTRRTYSSRPVTT
SYAVTRTKRTPIDWEKVPFVPRPSLISDPVTAFGVRRPDLERRQRSILDP
INRASIKPDYKLAYEPIEPYVSTRDKNRTRILGMVRQHIDTVEAGGNTAG
RTFRDSLDAQLPRLHRAVSESLPVRRETYRNERSGAMVTKYSY*
GH08754.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:20:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF17091-PA | 851 | GF17091-PA | 1..157 | 31..187 | 761 | 91.7 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:20:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH19567-PA | 895 | GH19567-PA | 1..157 | 31..187 | 746 | 89.2 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG45078-PA | 163 | CG45078-PA | 1..163 | 31..193 | 842 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:20:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI23863-PA | 912 | GI23863-PA | 1..157 | 31..187 | 729 | 86 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:20:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL21932-PA | 798 | GL21932-PA | 1..167 | 31..193 | 665 | 77.2 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:20:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA19674-PC | 163 | GA19674-PC | 1..163 | 31..193 | 739 | 85.3 | Plus |
Dpse\GA19674-PF | 827 | GA19674-PF | 1..167 | 31..193 | 668 | 77.8 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:20:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ10576-PA | 887 | GJ10576-PA | 1..167 | 31..193 | 679 | 79 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:20:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK13394-PA | 891 | GK13394-PA | 1..157 | 31..187 | 748 | 89.2 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:20:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\fau-PA | 907 | GE24668-PA | 1..157 | 31..187 | 841 | 99.4 | Plus |