Clone GH08757 Report

Search the DGRC for GH08757

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:87
Well:57
Vector:pOT2
Associated Gene/TranscriptCG14509-RC
Protein status:GH08757.pep: gold
Sequenced Size:2392

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14509 2003-01-01 Sim4 clustering to Release 3
CG14509 2008-04-29 Release 5.5 accounting
CG14509 2008-08-15 Release 5.9 accounting
CG14509 2008-12-18 5.12 accounting

Clone Sequence Records

GH08757.complete Sequence

2392 bp (2392 high quality bases) assembled on 2005-10-24

GenBank Submission: BT023953

> GH08757.complete
TCGAAGCGCGTGGTCGTCGAGTTTTCCGAGAAAATCCAGTGGGAAAGCAA
ACAGTGCGAGGCAGCAGCAGCAGCAGCAACAACAACTATCTAGAGCAAAG
GAAATTTGACAGACTTTGATGTGAACCGGACACGAGGGCGAGCACAGGAA
CAGACGGCAACCAAGCGAACAGCAAAAAAGAACCAAAGCAGAAGAGCCAC
GCCAATAGTGTGCAAATTAATATAGTTGGAGCAGCATGGATGAGGAGCAC
GACGACGATCGAATAATATGAGATTAGATGGGGCTCTAGAGCCCCGGCCC
CGTCAAGGAGCTGCCACAATCAAGGGCCGCCAGCCCCTGAGGCGCGAAAC
ACGCGAACCATGTGAGACGCAACAGCAGCAGCCAGCTGACGAAGACGACG
AGGCCACAGACGCTGAGTGTTTGACCACCAACAGCAGCAGCAGCAGCAGC
AGCACCAGCAGCACCAGCAGCAACAATTGCCAAGCCAACTTGGTCTGCAA
TCCAAAGAGAACAACATCAGCAACGCCCACGCCTAGAAAAACAACCGGCG
GCAGAGGCAATACCAGGCATACCATATTAATGGCGCCCAACGTGGGGCAT
CAGCGGAAGAGCCTTGGCCTGCGACTTCCGATGAAGCAGGGCCGCAGCCG
GCGGAGAATGATGGGTGCGGAATGGGGCTGGGAGCGCCTTAACGGCCTGC
TCCTGTGCCTGATTTCCGTTATTGCCCTGCTGCCGCCGCTGACGCTCGGC
GATGACGGCGATAATTTCTTTGCCGTGAATGCCTTTAGTGCGGGTCCGGA
GACGACAACGCCAGAGTTCGATTATGCCAGTCGTGGGCAGAAGAAGTTCG
GCGACAAGTGCGATAATACCCTGGAATGCGGCTTCCCCGGCTCCATCTGC
GATCCCAAGAAGAAGTCCTGCCAGTGCACCGAGGATCTGCCCGTCACCAA
TCACTATGACAAATGTGGCAAAGAGGCCGCCGTGAACGAGTCCTGCTTCT
TTAACGAGCAGTGCGAGATGAGATACTTCCAGACGGAGTGCCGCGATGGA
CGCTGCATCTGCCGGTTCGAGATGTCACCCATTTGGGGCAAGGACGGATC
CGTGGAGTGCAAAGGGCGCCAGGACAAGAGGGGACCCGAGACCTACATCG
ACCCGGCCATGATTGGCGTGCTGGTAGGAATGGCATTGATGTTTGTTATT
ATTTGTGTCGTCCTGCGATTGTTTAGCCAAGCTCGCTGGCGTGAGAACCG
AACCATCTTCAACACGCCCAATCCTCGCCTGATGAACGTCTCCCTGCTGC
GGGACAGCAAGCTGCTCCACGGCCAGGAGCGCCGAGGGTCCAGGATGTCG
GTGCGAGCGCCATCTCGTCAGCCCAGCATGGCCTCCCTGCGGCCCCACTC
CCCCAATCCGTCGCTAGGTAAGACAGGACGTATGATCCGGTCGAAGAGCA
ATACGCGGTCGAGTGACTCGCGGGTGAGCGATGTGTCCACCTGTTCGAGA
CTCCTGGAGCATCCGAGTGCCGCCAGCCAGCACAACCTGGTCCACAGCCA
TTTTCTGCCCTACGTGCCAACGACCACGGCCAGCACGGCAACGGCCACGA
ATGCCATCGCAACGTATGCTGCCTCGGCCACGCCCTCGCCCACGCCCACG
CCACCGCCCTCGGCGGGTCACCAATTGCCAATGGGCCATGCCAATGCCAC
CAGCACCACGAGCACCGCCAACACCACCACCACCACCACCACGTATGTGT
CCCCGGCGGGAATAGCACCAGCCTGTGGTCGGACCAACAAGTTCTAGGGT
TCCGGATCTCTAGATCACCACGCTGTACACATAGATACTCGTGCATATCC
GTGTGTGTCCGTAAACGTATCACAACCAAACCGCTAAAAAAACAAACGCA
TCCATATCAGGGTCCAAAGAGGCTCCCATTCCGAGTCGCATGGCAGCAAT
GCATCCGCAGCCTCGGTGCGCTCCAACCGCAGCAACTCGGTGGCTCCCGG
CAAGGTCGTCCACCATGAGCGCCACGGATCCGCCCATCGCCAGCACCACC
CACATGGCCACCAGCCGAAGGAGCAGCCGCAGTCGCCGCAGTCGCAGGAC
CAGTCGCTGATCACCAACATCACCACGAATCCGGTGGCCGAGAGCGTTAC
CGTCGAGATCATCGAGCCGGGTCAGAAGTAAGGGAACAGGATGGCTACTT
CGAGCACAAAGCTTGATTTTGCATTGGAAAGATTAACTGGCTAACTCTCT
GACACACGACAACAGGATACGAAATGCAGCACAAACTATAGGAAGATTTA
GTCACGGTATATGCACGCGATAATAAGGCGGGCACGCTCCCAAAAGGGGC
GTGGCACCGGTGAACAAAACACAAAAAAAAAAAAAAAAAAAA

GH08757.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:26:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG14509-RC 2900 CG14509-RC 250..2631 1..2382 11910 100 Plus
CG14509.b 2722 CG14509.b 138..2519 1..2382 11910 100 Plus
CG14509.h 4119 CG14509.h 138..2519 1..2382 11910 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:00:05
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 25004031..25004731 820..107 3275 97.9 Minus
chr3R 27901430 chr3R 24997799..24998295 1922..1425 2410 99.4 Minus
chr3R 27901430 chr3R 24996410..24996862 2372..1920 2205 99.1 Minus
chr3R 27901430 chr3R 24999414..24999611 1427..1230 990 100 Minus
chr3R 27901430 chr3R 25001534..25001687 973..820 770 100 Minus
chr3R 27901430 chr3R 25000468..25000611 1115..972 705 99.3 Minus
chr3R 27901430 chr3R 25000258..25000374 1229..1113 585 100 Minus
chr3R 27901430 chr3R 25017723..25017828 106..1 530 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:39:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29181159..29181872 820..107 3570 100 Minus
3R 32079331 3R 29174933..29175430 1922..1425 2490 100 Minus
3R 32079331 3R 29173534..29173996 2382..1920 2315 100 Minus
3R 32079331 3R 29176545..29176742 1427..1230 990 100 Minus
3R 32079331 3R 29178667..29178820 973..820 770 100 Minus
3R 32079331 3R 29177599..29177742 1115..972 720 100 Minus
3R 32079331 3R 29177389..29177505 1229..1113 585 100 Minus
3R 32079331 3R 29194888..29194993 106..1 530 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:18:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 28921990..28922703 820..107 3570 100 Minus
3R 31820162 3R 28915764..28916261 1922..1425 2490 100 Minus
3R 31820162 3R 28914365..28914827 2382..1920 2315 100 Minus
3R 31820162 3R 28917376..28917573 1427..1230 990 100 Minus
3R 31820162 3R 28919498..28919651 973..820 770 100 Minus
3R 31820162 3R 28918430..28918573 1115..972 720 100 Minus
3R 31820162 3R 28918220..28918336 1229..1113 585 100 Minus
3R 31820162 3R 28935719..28935824 106..1 530 100 Minus
Blast to na_te.dros performed 2019-03-16 07:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 5402..5457 1826..1881 117 71.9 Plus

GH08757.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:00:42 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 24996410..24996860 1922..2372 99 <- Minus
chr3R 24997800..24998293 1427..1921 81 <- Minus
chr3R 24999415..24999611 1230..1426 100 <- Minus
chr3R 25000258..25000372 1115..1229 100 <- Minus
chr3R 25000469..25000609 974..1114 99 <- Minus
chr3R 25001534..25001686 821..973 100 <- Minus
chr3R 25004031..25004731 107..820 92 <- Minus
chr3R 25017723..25017828 1..106 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:01:10 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
CG14509-RC 1..1530 268..1797 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:47:42 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
CG14509-RC 1..1530 268..1797 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:29:04 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
CG14509-RC 1..1530 268..1797 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:29:07 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
CG14509-RC 1..1530 268..1797 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:27:15 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
CG14509-RC 1..1530 268..1797 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:01:09 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
CG14509-RC 1..2372 1..2372 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:47:42 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
CG14509-RC 1..2372 1..2372 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:29:04 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
CG14509-RC 1..2372 1..2372 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:29:07 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
CG14509-RC 1..2372 1..2372 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:27:15 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
CG14509-RC 1..2372 1..2372 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:00:42 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29173544..29173994 1922..2372 100 <- Minus
3R 29174934..29175428 1427..1921 100 <- Minus
3R 29176546..29176742 1230..1426 100 <- Minus
3R 29177389..29177503 1115..1229 100 <- Minus
3R 29177600..29177740 974..1114 100 <- Minus
3R 29178667..29178819 821..973 100 <- Minus
3R 29181159..29181872 107..820 100 <- Minus
3R 29194888..29194993 1..106 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:00:42 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29173544..29173994 1922..2372 100 <- Minus
3R 29174934..29175428 1427..1921 100 <- Minus
3R 29176546..29176742 1230..1426 100 <- Minus
3R 29177389..29177503 1115..1229 100 <- Minus
3R 29177600..29177740 974..1114 100 <- Minus
3R 29178667..29178819 821..973 100 <- Minus
3R 29181159..29181872 107..820 100 <- Minus
3R 29194888..29194993 1..106 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:00:42 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29173544..29173994 1922..2372 100 <- Minus
3R 29174934..29175428 1427..1921 100 <- Minus
3R 29176546..29176742 1230..1426 100 <- Minus
3R 29177389..29177503 1115..1229 100 <- Minus
3R 29177600..29177740 974..1114 100 <- Minus
3R 29178667..29178819 821..973 100 <- Minus
3R 29181159..29181872 107..820 100 <- Minus
3R 29194888..29194993 1..106 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:29:04 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24999266..24999716 1922..2372 100 <- Minus
arm_3R 25000656..25001150 1427..1921 100 <- Minus
arm_3R 25002268..25002464 1230..1426 100 <- Minus
arm_3R 25003111..25003225 1115..1229 100 <- Minus
arm_3R 25003322..25003462 974..1114 100 <- Minus
arm_3R 25004389..25004541 821..973 100 <- Minus
arm_3R 25006881..25007594 107..820 100 <- Minus
arm_3R 25020610..25020715 1..106 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:07:34 Download gff for GH08757.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28919498..28919650 821..973 100 <- Minus
3R 28918431..28918571 974..1114 100 <- Minus
3R 28914375..28914825 1922..2372 100 <- Minus
3R 28915765..28916259 1427..1921 100 <- Minus
3R 28917377..28917573 1230..1426 100 <- Minus
3R 28918220..28918334 1115..1229 100 <- Minus
3R 28921990..28922703 107..820 100 <- Minus
3R 28935719..28935824 1..106 100   Minus

GH08757.hyp Sequence

Translation from 267 to 1796

> GH08757.hyp
MRLDGALEPRPRQGAATIKGRQPLRRETREPCETQQQQPADEDDEATDAE
CLTTNSSSSSSSTSSTSSNNCQANLVCNPKRTTSATPTPRKTTGGRGNTR
HTILMAPNVGHQRKSLGLRLPMKQGRSRRRMMGAEWGWERLNGLLLCLIS
VIALLPPLTLGDDGDNFFAVNAFSAGPETTTPEFDYASRGQKKFGDKCDN
TLECGFPGSICDPKKKSCQCTEDLPVTNHYDKCGKEAAVNESCFFNEQCE
MRYFQTECRDGRCICRFEMSPIWGKDGSVECKGRQDKRGPETYIDPAMIG
VLVGMALMFVIICVVLRLFSQARWRENRTIFNTPNPRLMNVSLLRDSKLL
HGQERRGSRMSVRAPSRQPSMASLRPHSPNPSLGKTGRMIRSKSNTRSSD
SRVSDVSTCSRLLEHPSAASQHNLVHSHFLPYVPTTTASTATATNAIATY
AASATPSPTPTPPPSAGHQLPMGHANATSTTSTANTTTTTTTYVSPAGIA
PACGRTNKF*

GH08757.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14509-PC 509 CG14509-PC 1..509 1..509 2711 100 Plus
CG14509-PE 506 CG14509-PE 1..506 1..509 2681 99.4 Plus
CG14509-PD 472 CG14509-PD 1..431 1..428 2098 92.1 Plus
CG14509-PB 469 CG14509-PB 1..428 1..428 2088 91.8 Plus

GH08757.pep Sequence

Translation from 267 to 1796

> GH08757.pep
MRLDGALEPRPRQGAATIKGRQPLRRETREPCETQQQQPADEDDEATDAE
CLTTNSSSSSSSTSSTSSNNCQANLVCNPKRTTSATPTPRKTTGGRGNTR
HTILMAPNVGHQRKSLGLRLPMKQGRSRRRMMGAEWGWERLNGLLLCLIS
VIALLPPLTLGDDGDNFFAVNAFSAGPETTTPEFDYASRGQKKFGDKCDN
TLECGFPGSICDPKKKSCQCTEDLPVTNHYDKCGKEAAVNESCFFNEQCE
MRYFQTECRDGRCICRFEMSPIWGKDGSVECKGRQDKRGPETYIDPAMIG
VLVGMALMFVIICVVLRLFSQARWRENRTIFNTPNPRLMNVSLLRDSKLL
HGQERRGSRMSVRAPSRQPSMASLRPHSPNPSLGKTGRMIRSKSNTRSSD
SRVSDVSTCSRLLEHPSAASQHNLVHSHFLPYVPTTTASTATATNAIATY
AASATPSPTPTPPPSAGHQLPMGHANATSTTSTANTTTTTTTYVSPAGIA
PACGRTNKF*

GH08757.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18410-PA 289 GF18410-PA 65..217 250..402 737 88.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12031-PA 471 GG12031-PA 1..188 1..184 769 82.6 Plus
Dere\GG12031-PA 471 GG12031-PA 193..386 316..504 569 84.8 Plus
Dere\GG21164-PA 124 GG21164-PA 51..124 248..321 416 98.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14008-PA 468 GH14008-PA 159..446 129..448 884 56.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
jus-PC 509 CG14509-PC 1..509 1..509 2711 100 Plus
jus-PE 506 CG14509-PE 1..506 1..509 2681 99.4 Plus
jus-PD 472 CG14509-PD 1..431 1..428 2098 92.1 Plus
jus-PB 469 CG14509-PB 1..428 1..428 2088 91.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:45:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13608-PA 670 GL13608-PA 207..570 130..503 1554 81.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:45:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13040-PC 569 GA13040-PC 1..569 1..509 1744 65.7 Plus
Dpse\GA13040-PB 550 GA13040-PB 1..458 1..384 1480 66.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:45:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12256-PA 579 GM12256-PA 1..494 1..504 2264 95.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:45:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17939-PA 465 GD17939-PA 1..424 1..428 1989 89.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:45:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14233-PA 519 GJ14233-PA 168..519 145..509 1394 76.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:45:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22496-PA 545 GK22496-PA 211..476 138..402 1333 90.6 Plus
Dwil\GK20235-PA 250 GK20235-PA 32..183 236..387 826 97.4 Plus
Dwil\GK22496-PA 545 GK22496-PA 1..90 1..71 171 55.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:45:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10469-PA 600 GE10469-PA 1..515 1..504 2150 87.7 Plus