GH08760.complete Sequence
997 bp (997 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094688
> GH08760.complete
CGAAATTGTGCGAATTTCATCACGACATTTAAATTGATTTCCGGACATAT
AAACAGAATCCAGAACTCATCCGGCAGCAGGCTCAGTCAGGCCAGTAAAT
CCGAAAAGAGAGTAACCAGCAGGAAAAGAGGATCCACGTAAATACAGAGA
AAATGGCTCTACGCGTCCAATTCGAGAACAACGACGACATCGGCGTCTTC
ACTAAACTAACCAACACATACTGCCTGGTGGCCATCGGTGGATCCGAGAC
CTTCTACAGCGCCTTCGAGGCGGAGCTGGGCGACACCATCCCGGTGGTGC
ATGCGAATGTGGGCGGCTGCCGGATCATCGGCCGCCTCACCGTGGGCAAC
CGCAACGGCCTGCTGGTGCCCAACTCCACCACCGACGAGGAGCTGCAACA
CCTGCGTAACAGCCTGCCAGACGCCGTGAAGATTTATCGTGTGGAGGAGC
GCCTGTCCGCGCTGGGCAACGTTATCGCCTGCAATGATTATGTGGCCCTG
GTGCACCCGGATCTGGACAAGGAGACCGAGGAGATCATCGCGGACGTGCT
CAAAGTAGAGGTCTTCCGCCAGACCATTGCCGACAACTCACTGGTGGGCT
CTTACGCCGTGCTGAGCAACCAGGGCGGCATGGTGCATCCCAAGACGAGC
ATTCAGGACCAGGACGAACTGTCGTCCCTGCTGCAGGTTCCCCTCGTGGC
CGGAACAGTGAACCGGGGCAGCGAAGTACTCGCCGCCGGCATGGTCGTCA
ACGACTGGCTCTCCTTCGTGGGCATGAACACCACGGCCACAGAGATCTCC
GTGATCGAGAGCGTCTTCAAGCTTAACCAGGCACAGCCCGCCACAGTGAC
GACCAAGCTGCGTGCGGCCCTCATCGAGGACATGTCCTAAGCGAAACTTT
CCCCACTTTCTACTTGATATAAGGATTATCTGTTATCTTCTACATTTCAT
TTAAGAAATACAAAACACGAAACTAAAACAAAAAAAAAAAAAAAAAA
GH08760.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:22:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF6-RA | 1054 | eIF6-RA | 76..1054 | 1..979 | 4895 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:08:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 19735328..19736306 | 979..1 | 4805 | 99.4 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:39:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:08:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23849243..23850224 | 982..1 | 4910 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:51:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 23850442..23851423 | 982..1 | 4910 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 15:08:37 has no hits.
GH08760.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:09:26 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 19735328..19736306 | 1..979 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:28:18 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF6-RA | 1..738 | 153..890 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:31:20 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF6-RA | 1..738 | 153..890 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:41:09 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF6-RA | 1..738 | 153..890 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:04:38 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF6-RA | 1..738 | 153..890 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:41:18 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF6-RA | 1..738 | 153..890 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:57:25 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF6-RA | 76..1054 | 1..979 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:31:20 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF6-RA | 76..1054 | 1..979 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:41:09 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF6-RA | 78..1056 | 1..979 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:04:38 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF6-RA | 76..1054 | 1..979 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:41:18 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF6-RA | 78..1056 | 1..979 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:09:26 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23849246..23850224 | 1..979 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:09:26 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23849246..23850224 | 1..979 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:09:26 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23849246..23850224 | 1..979 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:41:09 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19736769..19737747 | 1..979 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:38:22 Download gff for
GH08760.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23850463..23851441 | 1..979 | 100 | | Minus |
GH08760.pep Sequence
Translation from 152 to 889
> GH08760.pep
MALRVQFENNDDIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVH
ANVGGCRIIGRLTVGNRNGLLVPNSTTDEELQHLRNSLPDAVKIYRVEER
LSALGNVIACNDYVALVHPDLDKETEEIIADVLKVEVFRQTIADNSLVGS
YAVLSNQGGMVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVLAAGMVVN
DWLSFVGMNTTATEISVIESVFKLNQAQPATVTTKLRAALIEDMS*
GH08760.pep Blast Records
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:32:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH24978-PA | 245 | GH24978-PA | 1..245 | 1..245 | 1237 | 94.3 | Plus |
Dgri\GH22910-PA | 205 | GH22910-PA | 1..205 | 41..245 | 1028 | 94.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:58:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF6-PA | 245 | CG17611-PA | 1..245 | 1..245 | 1228 | 100 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:32:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA14578-PB | 245 | GA14578-PB | 1..245 | 1..245 | 1245 | 96.3 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:32:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ21479-PA | 245 | GJ21479-PA | 1..245 | 1..245 | 1230 | 94.3 | Plus |
GH08760.hyp Sequence
Translation from 152 to 889
> GH08760.hyp
MALRVQFENNDDIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVH
ANVGGCRIIGRLTVGNRNGLLVPNSTTDEELQHLRNSLPDAVKIYRVEER
LSALGNVIACNDYVALVHPDLDKETEEIIADVLKVEVFRQTIADNSLVGS
YAVLSNQGGMVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVLAAGMVVN
DWLSFVGMNTTATEISVIESVFKLNQAQPATVTTKLRAALIEDMS*
GH08760.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:39:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF6-PA | 245 | CG17611-PA | 1..245 | 1..245 | 1228 | 100 | Plus |