BDGP Sequence Production Resources |
Search the DGRC for GH08782
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 87 |
Well: | 82 |
Vector: | pOT2 |
Associated Gene/Transcript | Der-1-RA |
Protein status: | GH08782.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1075 |
Gene | Date | Evidence |
---|---|---|
CG10908 | 2001-01-01 | Release 2 assignment |
CG10908 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10908 | 2003-03-19 | Blastp of sequenced clone |
CG10908 | 2008-04-29 | Release 5.5 accounting |
CG10908 | 2008-08-15 | Release 5.9 accounting |
CG10908 | 2008-12-18 | 5.12 accounting |
1075 bp (1075 high quality bases) assembled on 2003-03-19
GenBank Submission: AY069069
> GH08782.complete AAGCAACAAAAATAGAGAAAATCACTCCGCACAAAAGCAGCGAATTAATG AATTAAACAGGACACCAAAGCATACACGAGAAGTACACACAATGGACGCT GGCGTGTGGTACCGCTCGCTGCCCCGCTTCACCCGCTACTGGCTGACGGC CACCGTGGTGTTGAGCATGCTCTGCCGCTTCGATGTGATACCCCTTCATT GGCTGCATCTGGACCGATCGGCCGTTTTCAGCAAGCTGCAGCTCTGGCGC TGCATGACGTCACTGTTCGTCTTTCCCATCTCGTCGAACACGGCCTTCCA CTTCCTCATCAACTGCTTCTTCATCGTTCAGTACAGCTCCAAACTGGAGA AGGATCAGTACAGCCGAAGTCCGGCTGATTACCTGTACCTGTTGATCGTG TCGGCGGTGCTGGCCAACATCGGGGGCATGATCTTCAACGTGTACTTCCT CATGGACACGCTGGTGCTGGCCATCACGTATATCTGGTGCCAGCTGAACA AGGACGTCACCGTGAGCTTCTGGTTCGGCACCAGGTTCAAGGCCATGTAC CTTCCCTGGGTGCTGGCCGCCTTCGAGTTTATTTTCCACTTCTCGCTCGC CTCGCTGGTGGGCATATTCGTGGGACATGTGTACTACTTCTTCAAGTTCC AATACTCGCAGGATTTGGGCGGCACACCCCTGTTGGAAACGCCGCAGTTC TTGAAGCGCCTGGTGCCAGATGTTTCCGGCGGATTCGGCGGCTTCGGACT CCCACCGGAGAGCAGAGCACCACCTAGGCAGGCGACCGAAAGTCCCTGGG GCCGGGGCATGACCTTGGGTCGCAACTGAACTCCAAGCTGAAACTCGAAA CTCTCTAGACTAGACTAATTCCCCTTTTTACGGTTTGGTTTACTCTATTT TCTCACCAAGCTCTTTACTTTTCCAACTATTTTTCGATCACCACTCGATT CTCTGGCGACAGCAATAAGTTAACATGTTAAGTGGAAGGATTGCATTGTG CATTGATGAAATTATATTAAAATATGTGTGTACATAAACAACCATTAAAG AAGACAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 1974830..1975182 | 703..1055 | 1705 | 98.9 | Plus |
chr2L | 23010047 | chr2L | 1973914..1974249 | 1..336 | 1680 | 100 | Plus |
chr2L | 23010047 | chr2L | 1974330..1974587 | 334..591 | 1275 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 1974650..1974761 | 592..703 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1975061..1975419 | 703..1061 | 1795 | 100 | Plus |
2L | 23513712 | 2L | 1974145..1974480 | 1..336 | 1680 | 100 | Plus |
2L | 23513712 | 2L | 1974561..1974818 | 334..591 | 1290 | 100 | Plus |
2L | 23513712 | 2L | 1974881..1974992 | 592..703 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1975061..1975419 | 703..1061 | 1795 | 100 | Plus |
2L | 23513712 | 2L | 1974145..1974480 | 1..336 | 1680 | 100 | Plus |
2L | 23513712 | 2L | 1974561..1974818 | 334..591 | 1290 | 100 | Plus |
2L | 23513712 | 2L | 1974881..1974992 | 592..703 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\BuT4 | 1447 | Dbuz\BuT4 BUT4 1447bp | 1345..1413 | 974..1041 | 117 | 65.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 1974830..1975182 | 703..1055 | 98 | Plus | |
chr2L | 1973914..1974249 | 1..336 | 100 | -> | Plus |
chr2L | 1974333..1974587 | 337..591 | 99 | -> | Plus |
chr2L | 1974650..1974760 | 592..702 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10908-RA | 1..738 | 92..829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Der-1-RA | 1..738 | 92..829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Der-1-RA | 1..738 | 92..829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10908-RA | 1..738 | 92..829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Der-1-RA | 1..738 | 92..829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10908-RA | 1..1055 | 1..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Der-1-RA | 20..1074 | 1..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Der-1-RA | 34..1088 | 1..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10908-RA | 1..1055 | 1..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Der-1-RA | 34..1088 | 1..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1974145..1974480 | 1..336 | 100 | -> | Plus |
2L | 1974564..1974818 | 337..591 | 100 | -> | Plus |
2L | 1974881..1974991 | 592..702 | 100 | -> | Plus |
2L | 1975061..1975413 | 703..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1974145..1974480 | 1..336 | 100 | -> | Plus |
2L | 1974564..1974818 | 337..591 | 100 | -> | Plus |
2L | 1974881..1974991 | 592..702 | 100 | -> | Plus |
2L | 1975061..1975413 | 703..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1974145..1974480 | 1..336 | 100 | -> | Plus |
2L | 1974564..1974818 | 337..591 | 100 | -> | Plus |
2L | 1974881..1974991 | 592..702 | 100 | -> | Plus |
2L | 1975061..1975413 | 703..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 1974145..1974480 | 1..336 | 100 | -> | Plus |
arm_2L | 1974564..1974818 | 337..591 | 100 | -> | Plus |
arm_2L | 1974881..1974991 | 592..702 | 100 | -> | Plus |
arm_2L | 1975061..1975413 | 703..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1974145..1974480 | 1..336 | 100 | -> | Plus |
2L | 1974564..1974818 | 337..591 | 100 | -> | Plus |
2L | 1974881..1974991 | 592..702 | 100 | -> | Plus |
2L | 1975061..1975413 | 703..1055 | 100 | Plus |
Translation from 1 to 828
> GH08782.hyp SNKNRENHSAQKQRINELNRTPKHTREVHTMDAGVWYRSLPRFTRYWLTA TVVLSMLCRFDVIPLHWLHLDRSAVFSKLQLWRCMTSLFVFPISSNTAFH FLINCFFIVQYSSKLEKDQYSRSPADYLYLLIVSAVLANIGGMIFNVYFL MDTLVLAITYIWCQLNKDVTVSFWFGTRFKAMYLPWVLAAFEFIFHFSLA SLVGIFVGHVYYFFKFQYSQDLGGTPLLETPQFLKRLVPDVSGGFGGFGL PPESRAPPRQATESPWGRGMTLGRN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Der-1-PB | 245 | CG10908-PB | 1..245 | 31..275 | 1316 | 100 | Plus |
Der-1-PA | 245 | CG10908-PA | 1..245 | 31..275 | 1316 | 100 | Plus |
Der-2-PA | 261 | CG14899-PA | 7..248 | 36..263 | 268 | 29.4 | Plus |
Translation from 91 to 828
> GH08782.pep MDAGVWYRSLPRFTRYWLTATVVLSMLCRFDVIPLHWLHLDRSAVFSKLQ LWRCMTSLFVFPISSNTAFHFLINCFFIVQYSSKLEKDQYSRSPADYLYL LIVSAVLANIGGMIFNVYFLMDTLVLAITYIWCQLNKDVTVSFWFGTRFK AMYLPWVLAAFEFIFHFSLASLVGIFVGHVYYFFKFQYSQDLGGTPLLET PQFLKRLVPDVSGGFGGFGLPPESRAPPRQATESPWGRGMTLGRN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14591-PA | 245 | GF14591-PA | 1..245 | 1..245 | 1128 | 87.8 | Plus |
Dana\GF16510-PA | 257 | GF16510-PA | 7..257 | 6..230 | 252 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24816-PA | 245 | GG24816-PA | 1..245 | 1..245 | 1253 | 96.3 | Plus |
Dere\GG19906-PA | 261 | GG19906-PA | 7..248 | 6..233 | 257 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH25208-PA | 246 | GH25208-PA | 1..246 | 1..245 | 1017 | 74 | Plus |
Dgri\GH19287-PA | 259 | GH19287-PA | 7..243 | 6..233 | 257 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Der-1-PB | 245 | CG10908-PB | 1..245 | 1..245 | 1316 | 100 | Plus |
Der-1-PA | 245 | CG10908-PA | 1..245 | 1..245 | 1316 | 100 | Plus |
Der-2-PA | 261 | CG14899-PA | 7..248 | 6..233 | 268 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17281-PA | 245 | GI17281-PA | 1..245 | 1..245 | 1026 | 74.3 | Plus |
Dmoj\GI23500-PA | 259 | GI23500-PA | 7..245 | 6..233 | 264 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19666-PA | 243 | GL19666-PA | 1..243 | 1..245 | 935 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10631-PA | 243 | GA10631-PA | 1..243 | 1..245 | 930 | 78 | Plus |
Dpse\GA26359-PA | 258 | GA26359-PA | 7..206 | 6..207 | 244 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16838-PA | 82 | GM16838-PA | 1..81 | 1..81 | 425 | 98.8 | Plus |
Dsec\GM15426-PA | 261 | GM15426-PA | 7..248 | 6..233 | 255 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23120-PA | 245 | GD23120-PA | 1..245 | 1..245 | 1272 | 98.4 | Plus |
Dsim\GD20283-PA | 324 | GD20283-PA | 7..259 | 6..244 | 253 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22875-PA | 246 | GJ22875-PA | 1..246 | 1..245 | 1013 | 74 | Plus |
Dvir\GJ10254-PA | 256 | GJ10254-PA | 7..247 | 6..234 | 262 | 28.3 | Plus |