Clone GH08789 Report

Search the DGRC for GH08789

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:87
Well:89
Vector:pOT2
Associated Gene/TranscriptCG18659-RB
Protein status:GH08789.pep: wuzgold
Preliminary Size:3611
Sequenced Size:2549

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG18659 2000-02-14 Blastp of sequenced clone
CG18659 2001-01-01 Release 2 assignment
CG18659 2003-01-01 Sim4 clustering to Release 3
CG18659 2008-04-29 Release 5.5 accounting
CG18659 2008-08-15 Release 5.9 accounting
CG18659 2008-12-18 5.12 accounting

Clone Sequence Records

GH08789.complete Sequence

2549 bp (2549 high quality bases) assembled on 2000-02-14

GenBank Submission: AF145652

> GH08789.complete
TTCAAAGACTACCTGGGTGCGCCCATGCCATATCTGATTGGTGTGCCAGA
ACCAGTGCTCGAAACCGTCACCAGTGATGAGCTGGGTGAAGTTGTGATTC
TGAACTGTGATACGAAAATATTCGAAAGCCCATTCGACGATGTGCACAAT
CTGCCAACGGAGATTGTGTCACAGCTGAAGAAGCATCTGAATCACACACA
TGACCACATCGGCGACCGCATCTCGAAGATCTTCCTAAACGCACTGGTGC
AGCTCATCGGTGGCTACCGGGACGCTGTGGAGTACCACGAGAACAGCAAG
ACGTTTAATTCCCAAAAATTCATTGAATCTCGGCCGGCGCACCTGCGCCC
CTTTCTTGCCAAAATGATGGATCTACAGATCTTTGCGCAGTTCATTGACG
ATCGCCTAACGATGCTCAACAGCGGACTCGGCTTCTCGGACGAGTTCGAG
CTGGAGACGGTGCGCTATGCGGAAAAGAAGAAGCGCGGTCGAAACTACGC
CATCATGAAGAACCTTAAGGACAAGTACTTGGGAAAGCGCAGTTTGTCGC
GATTGTTTGCCAAGAACAATACTTAGACTGCCCACCATGACAAATCCACC
AAATCCAATTACCAATATATAAACGAGTAGAATGTTCATTCCCACACACC
TTATTTGCAATACTAATCCGGCTGTAAAGTCTGCCGTCAAATCGGTTAAG
GAGGGCTCGCGGGGCATGAAGACCGCCTATAAGGGATTCAAGACAAAGCT
GCGCGAGAACGGAAACCAGTTTGGTGGCACGCACTTCCACTTTGGACTTG
GCTCCCCGAATCATTCGGATCGTCCTGACGGCACCAGCGGAGGATACGTT
CGTGGTGGCAAGGCCATCGGGGCTGCACACCACTCGGCGCCCAGTTCTCC
AGTGACCAGCAAGCGTCTTGATGGAATTGCCTCCGTCACGGGAAGCAGCG
GCAGCGGTGGATCCGGCGCCAGGGAGCCGCGGGAGTTCCTGCGACGCGGT
CCCGTCCCGCTGGCCATGTCTAGCTCGAGCAGCCACATTCAGCCGAACGG
CCATGCGTACGGTGCGAGTGCTGGTGCTCATTATGGTCATCATCTCGCTG
CGTCTCCTGCTGTTAGCTCGGCGAGCTCGCTCTGCTCATCTTCGGAGATG
AACCTGTCGCAGGAACTGCAGAACCATCCGCTTTTCAAGACGCCGGCAGT
GGACCGCAGCCTTAAGCCAAACGCAGAGCACAGGCGAGGAGCAGCACCGC
CAGCCCGTCCACCGCCACCGCAATCTACGCCCGCCTCCTACTACAATCAT
CCCTATGCCGCGCATCCGCACGTGGAGTCTAAGCCGCCAAGGCACACCTC
CACGCCCACCAGACCGCGTCAGCCCCTGCCTACCGCCGATTCCAGCAGCT
TTGATAGTCCGCCGGACGTACAATCTCCACCGATTCCGCCCCGGAGGCAG
GGCAGCTCGAATGCGATTGTGGCGGCCACGGCTGCAGCCGTCAGTGCAGA
GATTAGCAAACTGGAACGTAACTGCTGGAAGGACGAGCCCGGAAATGATT
CTGTACGCAGCTCGAATGCATCCTCGTCATCGGCGACCTCATCCTCCTCG
GGCGCATCGTTTGTGACGGCGGCGTCGACGTTCTCGCATCTTAATGTGTC
TGATCCGCCCATTCCGACACCGCGGGCCAAGAGAGAGCAACAGCAGCCAC
TGGAGGACAGCATGAATGATCTGATATCGCTGGACGATAGCAACAACACC
AGCTTCGACCTGGAGGACTTCGATCCGCTCAATCAGAATGCTCGTCCGTT
GCCGCCGCTCAGCACGGCATTTGCCAAGAAGTGCAGCACACTGCCCGCTG
GCGTCAACAGCAGTGTGGTGGCCAGTAGCGTCAGCAATCCACTGTACCCG
TATTTCGCGCCCAAGCACATGGCCACGGTGGCAGCTGTGACGGGACGGAC
GCCACCGATGCACCCACCGCCGCAGATCCAGCGCAACACCATTGCCGCCA
AGCCCGACGACGACTTCGAGCTGCTCCGCAAGTACGGCCTGGACCAGTTC
ACCCTGAACGCCAACGGAACGGAGAAGTCGCAGCAGCTCACCACCGGAAA
GGGCATGAACAACTGGACAACATTCGATTGAAGGGACACAGCTGGTCAGA
TAACCTGCATCAAATATGATACCAAAATAAGTGTGATTGATAGATTGTGT
TGTAAATAGCTAGGAGAGATAGGCAAAATCAAGGATGGGAGAGCGATGAC
AGTAAAATAACCCCTAAATACCCAAAATTGTGTGTCTGCAGTAGTGAGTT
AGTGAGTTATACTTAAGCAGAGGATCCAATTAAAACGCTTGTTTGTGTAA
ATAACTGTTTAGTGAAAAGTTTTAACAATTGCATGAATCGGAACTCTCGC
TAACTACGCATACTTACATACATATTGTACGCTGGACTTCCAAATCAAAA
GACACAAGAATCTAGAGTAGCATGAATTTAAGCCAATTAGCCTAACAAAT
TACCAATAAATATAAAATAAATTCCAATTAAAAAAAAAAAAAAAAAAAA

GH08789.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:40:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG18659-RB 2748 CG18659-RB 213..2744 1..2532 12660 100 Plus
CG18659-RA 3610 CG18659-RA 1736..3610 658..2532 9360 99.9 Plus
CG18659.d 3895 CG18659.d 2577..3895 1211..2529 6595 100 Plus
CG18659-RA 3610 CG18659-RA 1215..1739 1..525 2625 100 Plus
CG18659.d 3895 CG18659.d 1206..1730 1..525 2625 100 Plus
CG18659.d 3895 CG18659.d 1730..2246 694..1210 2585 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:50:14
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 5010882..5011725 2529..1686 4220 100 Minus
chr2R 21145070 chr2R 5013129..5013645 1210..694 2585 100 Minus
chr2R 21145070 chr2R 5012312..5012798 1697..1211 2390 99.4 Minus
chr2R 21145070 chr2R 5014997..5015455 525..67 2295 100 Minus
chr2R 21145070 chr2R 5014605..5014742 661..524 690 100 Minus
chr2R 21145070 chr2R 5015513..5015580 68..1 340 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:39:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:50:12
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9123301..9124147 2532..1686 4235 100 Minus
2R 25286936 2R 9125551..9126067 1210..694 2585 100 Minus
2R 25286936 2R 9124734..9125220 1697..1211 2390 99.4 Minus
2R 25286936 2R 9127419..9127877 525..67 2295 100 Minus
2R 25286936 2R 9127027..9127164 661..524 690 100 Minus
2R 25286936 2R 9127935..9128002 68..1 340 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:02:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 9124500..9125346 2532..1686 4235 100 Minus
2R 25260384 2R 9126750..9127266 1210..694 2585 100 Minus
2R 25260384 2R 9125933..9126419 1697..1211 2390 99.3 Minus
2R 25260384 2R 9128618..9129076 525..67 2295 100 Minus
2R 25260384 2R 9128226..9128363 661..524 690 100 Minus
2R 25260384 2R 9129134..9129201 68..1 340 100 Minus
2R 25260384 2R 9127378..9127412 696..662 175 100 Minus
Blast to na_te.dros performed on 2019-03-16 00:50:13 has no hits.

GH08789.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:51:15 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 5010882..5011723 1688..2529 100 <- Minus
chr2R 5012322..5012798 1211..1687 100 <- Minus
chr2R 5013129..5013644 695..1210 100 <- Minus
chr2R 5013759..5013791 662..694 100 <- Minus
chr2R 5014605..5014740 526..661 100 <- Minus
chr2R 5014997..5015455 67..525 100 <- Minus
chr2R 5015515..5015580 1..66 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:28:34 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
CG18659-RB 1..1500 632..2131 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:33:19 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
CG18659-RA 733..1253 1..521 100 == Plus
CG18659-RA 1254..2727 658..2131 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:52:31 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
CG18659-RA 733..1253 1..521 100 == Plus
CG18659-RA 1254..2727 658..2131 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:07:49 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
CG18659-RB 1..1500 632..2131 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:14:49 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
CG18659-RA 733..1253 1..521 100 == Plus
CG18659-RA 1254..2727 658..2131 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:35:28 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
CG18659-RB 1..2529 1..2529 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:33:19 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
CG18659-RB 1..2529 1..2529 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:52:31 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
CG18659-RE 1127..3655 1..2529 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:07:50 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
CG18659-RB 1..2529 1..2529 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:14:49 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
CG18659-RE 1127..3655 1..2529 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:51:15 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9127027..9127162 526..661 100 <- Minus
2R 9123304..9124145 1688..2529 100 <- Minus
2R 9124744..9125220 1211..1687 100 <- Minus
2R 9125551..9126066 695..1210 100 <- Minus
2R 9126181..9126213 662..694 100 <- Minus
2R 9127419..9127877 67..525 100 <- Minus
2R 9127937..9128002 1..66 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:51:15 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9127027..9127162 526..661 100 <- Minus
2R 9123304..9124145 1688..2529 100 <- Minus
2R 9124744..9125220 1211..1687 100 <- Minus
2R 9125551..9126066 695..1210 100 <- Minus
2R 9126181..9126213 662..694 100 <- Minus
2R 9127419..9127877 67..525 100 <- Minus
2R 9127937..9128002 1..66 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:51:15 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9127027..9127162 526..661 100 <- Minus
2R 9123304..9124145 1688..2529 100 <- Minus
2R 9124744..9125220 1211..1687 100 <- Minus
2R 9125551..9126066 695..1210 100 <- Minus
2R 9126181..9126213 662..694 100 <- Minus
2R 9127419..9127877 67..525 100 <- Minus
2R 9127937..9128002 1..66 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:52:31 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5010809..5011650 1688..2529 100 <- Minus
arm_2R 5012249..5012725 1211..1687 100 <- Minus
arm_2R 5013056..5013571 695..1210 100 <- Minus
arm_2R 5013686..5013718 662..694 100 <- Minus
arm_2R 5014532..5014667 526..661 100 <- Minus
arm_2R 5014924..5015382 67..525 100 <- Minus
arm_2R 5015442..5015507 1..66 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:45:24 Download gff for GH08789.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9124503..9125344 1688..2529 100 <- Minus
2R 9125943..9126419 1211..1687 100 <- Minus
2R 9126750..9127265 695..1210 100 <- Minus
2R 9127380..9127412 662..694 100 <- Minus
2R 9128226..9128361 526..661 100 <- Minus
2R 9128618..9129076 67..525 100 <- Minus
2R 9129136..9129201 1..66 100   Minus

GH08789.hyp Sequence

Translation from 631 to 2130

> GH08789.hyp
MFIPTHLICNTNPAVKSAVKSVKEGSRGMKTAYKGFKTKLRENGNQFGGT
HFHFGLGSPNHSDRPDGTSGGYVRGGKAIGAAHHSAPSSPVTSKRLDGIA
SVTGSSGSGGSGAREPREFLRRGPVPLAMSSSSSHIQPNGHAYGASAGAH
YGHHLAASPAVSSASSLCSSSEMNLSQELQNHPLFKTPAVDRSLKPNAEH
RRGAAPPARPPPPQSTPASYYNHPYAAHPHVESKPPRHTSTPTRPRQPLP
TADSSSFDSPPDVQSPPIPPRRQGSSNAIVAATAAAVSAEISKLERNCWK
DEPGNDSVRSSNASSSSATSSSSGASFVTAASTFSHLNVSDPPIPTPRAK
REQQQPLEDSMNDLISLDDSNNTSFDLEDFDPLNQNARPLPPLSTAFAKK
CSTLPAGVNSSVVASSVSNPLYPYFAPKHMATVAAVTGRTPPMHPPPQIQ
RNTIAAKPDDDFELLRKYGLDQFTLNANGTEKSQQLTTGKGMNNWTTFD*

GH08789.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:40:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG18659-PA 908 CG18659-PA 420..908 11..499 2570 100 Plus
CG18659-PI 906 CG18659-PI 420..906 11..499 2547 99.6 Plus
CG18659-PC 897 CG18659-PC 413..897 15..499 2521 98.8 Plus
CG18659-PD 749 CG18659-PD 420..602 11..193 954 100 Plus
CG18659-PF 607 CG18659-PF 413..592 15..194 906 96.1 Plus
CG18659-PD 749 CG18659-PD 537..749 286..499 805 74.4 Plus

GH08789.pep Sequence

Translation from 631 to 2130

> GH08789.pep
MFIPTHLICNTNPAVKSAVKSVKEGSRGMKTAYKGFKTKLRENGNQFGGT
HFHFGLGSPNHSDRPDGTSGGYVRGGKAIGAAHHSAPSSPVTSKRLDGIA
SVTGSSGSGGSGAREPREFLRRGPVPLAMSSSSSHIQPNGHAYGASAGAH
YGHHLAASPAVSSASSLCSSSEMNLSQELQNHPLFKTPAVDRSLKPNAEH
RRGAAPPARPPPPQSTPASYYNHPYAAHPHVESKPPRHTSTPTRPRQPLP
TADSSSFDSPPDVQSPPIPPRRQGSSNAIVAATAAAVSAEISKLERNCWK
DEPGNDSVRSSNASSSSATSSSSGASFVTAASTFSHLNVSDPPIPTPRAK
REQQQPLEDSMNDLISLDDSNNTSFDLEDFDPLNQNARPLPPLSTAFAKK
CSTLPAGVNSSVVASSVSNPLYPYFAPKHMATVAAVTGRTPPMHPPPQIQ
RNTIAAKPDDDFELLRKYGLDQFTLNANGTEKSQQLTTGKGMNNWTTFD*

GH08789.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:29:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12952-PA 921 GF12952-PA 420..921 11..499 1833 81.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:29:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10581-PA 907 GG10581-PA 412..907 3..499 2018 94.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:29:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21489-PA 937 GH21489-PA 416..937 6..499 1202 60.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:15:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG18659-PA 908 CG18659-PA 420..908 11..499 2570 100 Plus
CG18659-PI 906 CG18659-PI 420..906 11..499 2547 99.6 Plus
CG18659-PC 897 CG18659-PC 413..897 15..499 2521 98.8 Plus
CG18659-PD 749 CG18659-PD 420..602 11..193 954 100 Plus
CG18659-PF 607 CG18659-PF 413..592 15..194 906 96.1 Plus
CG18659-PD 749 CG18659-PD 537..749 286..499 805 74.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:29:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19461-PA 953 GI19461-PA 418..953 6..499 1218 59.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:29:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16849-PA 576 GL16849-PA 48..576 11..499 1673 76.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15037-PB 576 GA15037-PB 48..576 11..499 1734 75.2 Plus
Dpse\GA15037-PA 952 GA15037-PA 419..952 11..499 1733 74.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20629-PA 476 GM20629-PA 329..476 351..499 761 96 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:29:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10102-PA 390 GD10102-PA 84..390 194..499 1571 98.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:29:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15120-PA 542 GJ15120-PA 2..542 7..499 1169 59.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23261-PA 928 GK23261-PA 421..928 11..499 1373 67.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:29:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22543-PA 909 GE22543-PA 412..909 3..499 2455 94.8 Plus