Clone GH08887 Report

Search the DGRC for GH08887

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:88
Well:87
Vector:pOT2
Associated Gene/Transcriptbnl-RC
Protein status:GH08887.pep: gold
Preliminary Size:4256
Sequenced Size:4313

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4608 2001-01-01 Release 2 assignment
CG4608 2003-01-01 Sim4 clustering to Release 3
CG4608 2003-02-13 Blastp of sequenced clone
bnl 2008-04-29 Release 5.5 accounting
bnl 2008-08-15 Release 5.9 accounting
bnl 2008-12-18 5.12 accounting

Clone Sequence Records

GH08887.complete Sequence

4313 bp (4313 high quality bases) assembled on 2003-02-13

GenBank Submission: BT003790

> GH08887.complete
CGGAGCGTCCGCAGTCGCAGTAGCACTCGAAGTCCGCTTATCCGCATCCG
CAGCGTTTTCGAATTTTTCAGACCTACCATTCGATCCGATCCGATCCATC
TGGCACATCCTAACCATCTCTAATCGTAACCCCATCATCGTGATCGCGTC
CGTAATCGCTCCGTTTTAACGTACTCGATGTTCCGGTTTTGTGTGCAATC
GTTTTCAAAGGAGATCGAAACAATAATCTCGGCGGATAGGAAATTTGAAA
CACGAATGTTCGTTTCGCAATCCAAGAGAGTCGTTACAATTTGAAAAGCC
CGCAATAAAAAAAAAAAATCGTTTAGATGCGAGCAATTCGAAGATCGGAA
AATATATAAAAAAATAAATATATATATATGATTTGTGCTGTGTTTGAAAA
AGGAATATAAGAAAAAAATTATGAAAATGTTGAATTGTTGTTGCCGTAAG
TTTTAAAGTGTGCAAAGTGCAACTCTCTGAAAATCAACGAAGAATACAAC
GCGTCCAAAAAAAGAATCGTAAAACTGAAAAAAAAGCAAACAAACATAAA
ACCTAGCTCGTCAACTATGTTAGCCAACCGAAATTTGGCCGCATAAACAA
GCTGAAATTGCTTCATTCCTCGCTCCCTAACCAAACCGCGGGAATTTCTG
ACATGACAAGAAAGTCATTGGCGTTGATAAGATGCATTATCAGCGGGGAA
GACGAAGATGAAGATCCGCAACAGCAACAGCAGCAATTGAAAAGTGTTGA
ACAAGTCTACGATATGATAACCTAATTTCCTCCCAGGAAAGAGGCGAAAC
GATTTTAACGAAAATATAAACGGGCTCAGAGAGAGAGAAATACTTGCAAA
GCGAAGCAAAGTCAGTGAAAAGAAAAAAAAAAACGTAATCGAAACGAAAG
TAAAAAGAGATATCTGAAAACGGGGCGTACATATGTTCCAACGACACCCG
AGGGCGTGGCGCACGCCCAATAAACTGGCAAACAATCTATAAACAACTGC
GAGACTACACAGCGATTTATACAAAAATTATAAACATTCGGACTCAGATT
CCGAACCGGGCGGAAAACAACGGCTCGAGAAACCCCTGTGAACCAAAGTG
GTGATCTTTGATGCGAAGAAACCTGCGCTTAGACTGGAGGGCCCTGGCGC
TGCTGGGCGCCCTCCTCTCGTTCATCATCGCCTGGCGGGGCCTTGTATCT
GCGATGCCCCTCATGGCCATGGACAACAACTTGACAGACTCATCCGGATC
CACAAACACATCCACATCCTCCACATCAAAATACAACAGCACGAACAATA
GTAATCTGTTTAGTAATAGTTATCTACAAAGTGATCATAGTCGTAGTAGT
TTAGTGCCGAGCGCAGTGAGTGAACGTAGTGTAAATCAACCCACAAATCA
AAGTATTAATGCTGAATTTAATCAGAGCTTAAGCACGCATCCAACTGCCA
TAACAAGCACACCACAAACCCAAACTCAAACCCAAATCCAATCCCAATAC
CCATCGCAGGCGGAGGATTCCGATCAGCTGGAGGAGCCGCTGGGATTCGT
CATCTCAGCGATGCCGAACGAGCATCTGGCGGTCCTGTCGCGTACCGAAC
GCAGCATTCGTCACCAGAATCAGCAGCAGCAGAAGAAGCATCACCATCAT
CACCAACAACAGCAACAGCAACAGCATCAGCAGCAGCAACCAATGTCGCC
CGCTGACAATAATTTCATTGGTTCGAAATCGAAAAGACTGAGCAACCCTA
GAAGTAGTCTTAACATAAATAGCAGTAGCAGTAACACGCCCATCAGCAAT
CTGGACCGTAACGAACGATCCACGGTGCCACAGTCCCATTTGGCCTGGAC
CTCGCGCAAGATCCAGCTGTACATCAAAAATCGCATCCTTCAGATATTGC
GGGATGGCGTTGTCAACGGAACCCAGGACGAGAATAGTGAATTCACAATT
CTCCAGCGATCCACGGTGGATGTGGGACGCATCAAGTTGCAGAGTGTGGC
CACTTGCCTGTATCTCTGCATGGACGCGTGCGGTGTTCCCTACGGCTCGA
AAGACTTCACCGACGACTGCGTCTTCAACGAGAACATGGGTCTTCAGAAC
TACAACACTTACTCCTCCACGTACCACTCTCAGGCGCGGCGGGTCTTCTA
CCTGGCCCTGAATGGCAGTGGCCAGCCCCGGCGTACCCAGATCCCGGCCA
GCCGATCGCTGGGCAAGCTGAGCACCTACACGAACGCCATCACGGAGACG
GTGCCGCAGGAGCGGGTCGAGCAGCTGATCGCCAAGAATTTTGGGGCCAA
TCGCGTCAAGCACGGCGTGCGGCAACTCTGTGATACGGGCAAGCCGCTGA
TCGAGCTGATCGATGTGGCCAGATTCAAGGCGCCGCCACATTGCAGCAGC
AACACTAGTGGCAGCAGCAGCAGCATCAGCAGCAGCAGTAGTAGCAGTAG
CAAAAGTAGTAGCAATAGCAGTAGCAGTTACGTTCCTGTGTCTGCGATCA
GCAGCCTGAGTAGTATTAGTAACAGTAGTCAAAGCGAGAGCGGCCATATT
AGCAGTAGCCTTAGCGGTAGCAGTAACAGTAATAGTAGTAGCAATAGTAG
TAGCAGTAACAGTAGCAGTAATAGTAGTAGACCAAGTGGTAGCAAGGCCA
ACAAGAAGAAGAAGCCCAAGTGCAAGCCGCACGAGCAGGAGGACACTCAC
AATTGCCAGAAGCGCGGTGGCGCCGGAGCGGGAGCATTGCGAAAACTTGG
TCCCAAGGCGAAGAGGTGCAAGGAGCTGCGGGAGAAGGCGGCCGCCGAGA
AGCGAGCGCCGCCCAATTGTGGCAAGAAGAATGGGGCCAGGAAGAATCCT
ACAGAGGCAGCCAAGGCGGTGCAACAGCGACCCAAGGGAAACATCCAGCA
CGGAGGCAAGAAGAAGCCGAACAAGGCTGGTAAACAGCGCCAAAATGGGG
GCAAAAAGCAGCAGCAGCAGCAACAGCATCAGTTGCAACAACAGCCGCTG
CAACATCAGGCCAAATCCATTTCCGGTGGCAAGAGGAAGCATCGGAAATT
GGATGCAAGTACCACCACCACCATGGCCACCAGCCTGGGCACGCCCCCAA
GTAGCCACTGGGAGAGCAGCTCGCCGCTGCCCGCATTTTCCCTTAGCGAA
ACCAGCGATAGGGTGGAGCGCAACGTGCGCATGAGCAGCGGCGAGGAGCA
GGATCAGGATAACGACCAGGATCAGGAGCAGTCCGATCCGGGGGAGCAGG
GCGAGGAGGAGACCGAGGGCGACGGTGGATCCCTAGAAGATGCGAGCTAC
GAGGACTCAAGTTCCGAGGCCCAAGGACGCAGCGGAGCAGGCGGCGACGA
TTCGCTCTACTACGATTTCGGACTGTTGTCCCCCCGGCGATGATGCACAG
TGCAACCAAGATCCCCACTAAAGACGATGAATATCAATGTATTACGACGG
AGTCTCGAGTATTTTATAAGAACCTCTCAAGCCAACCATTTGGAGTATAA
TTATCATCGAAATGTATTATAAACGCACGCACCCATCCAATCAGATAGAT
GTAAATTCGAAGCCCTAACCTTACGCAACACGAATGACCCAAAAGAGTCT
ATTGAAATACTTGAGTCTCTGTGGCGGAACTTTCACGATCGGTTGACGAT
GAAAATACTCAAAAACACGACCACTCCGATAAGTCTACCAGAAACAAAAC
TTGAAAACTTGCAAAACGCTTTCCCAATACTGTAAAAACGAGCAAAGCGT
TGATATAATTCGAATATGTCGAGGAAATACAATTGTAAATAGATACGCGG
CTTAGTCAAGTAAGATCCATTTTTTGTCTGTACTGTCGAACCTCGCGTAG
CCTTAGCCTTGTAAATCACCTTTGAATGCAATTTTTCCCACTCAAGTTAA
AAATCGCAATGCGAAAGTATGAAGCAAACGATACATCGAAAACTATTATA
AAATAAATACAAGAAAAGTTGGAAGCAAAACTCACAAATCATAAGATTGT
ATTTTCATTTACAATACTTACGAAACTAACATTAATGTTAATTTATTCGA
TCAACGAGATAAATGCGTGAAATTATAGTTGTAGCTGTATGATGGATTTA
TTTATTTATTTAAAAATATTTATTTATAAACTACTTCTAGTACGCTTAGG
CTTAGACTAACAAACTTTGTTATAACTTAATGCATTAAACAAACAATTTC
CAGATAAGTCAGTAGTAAACGATCAACGAAAAGAGCATGAGAGAAACGCG
AAAAAAACTAAACTAAAAAATAAAGTATAAAAATACATTAATATCAAAAA
AAAAAAAAAAAAA

GH08887.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:22:44
Subject Length Description Subject Range Query Range Score Percent Strand
bnl.a 4645 bnl.a 1..4298 1..4298 21490 100 Plus
bnl-RC 4383 bnl-RC 89..4383 1..4295 21475 100 Plus
bnl-RA 3809 bnl-RA 89..3457 1..3369 16845 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:34:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 15651561..15652952 1945..555 6865 99.7 Minus
chr3R 27901430 chr3R 15620109..15621428 3368..2049 6495 99.5 Minus
chr3R 27901430 chr3R 15618484..15619410 4295..3369 4635 100 Minus
chr3R 27901430 chr3R 15660166..15660719 556..1 2700 99.5 Minus
chr3R 27901430 chr3R 15624293..15624396 2049..1946 520 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:39:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:34:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19827654..19829044 1945..555 6955 100 Minus
3R 32079331 3R 19796214..19797533 3368..2049 6600 100 Minus
3R 32079331 3R 19794586..19795515 4298..3369 4650 100 Minus
3R 32079331 3R 19836262..19836817 556..1 2780 100 Minus
3R 32079331 3R 19800398..19800501 2049..1946 520 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 19568485..19569875 1945..555 6955 100 Minus
3R 31820162 3R 19537045..19538364 3368..2049 6600 100 Minus
3R 31820162 3R 19535417..19536346 4298..3369 4650 100 Minus
3R 31820162 3R 19577093..19577648 556..1 2780 100 Minus
3R 31820162 3R 19541229..19541332 2049..1946 520 100 Minus
X 23527363 X 19476782..19476860 1612..1690 215 84.8 Plus
2R 25260384 2R 20168923..20168997 1615..1689 195 84 Plus
X 23527363 X 4091449..4091486 1651..1688 160 94.7 Plus
X 23527363 X 4091305..4091369 1621..1685 160 83 Plus
X 23527363 X 4091290..4091341 1639..1690 155 86.5 Plus
X 23527363 X 4091447..4091480 1655..1688 140 94.1 Plus
X 23527363 X 4092149..4092194 2957..3002 140 86.9 Plus
Blast to na_te.dros performed 2019-03-16 23:34:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6944 2871..3090 211 58.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6875 2933..3084 175 62.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6744..6890 2933..3084 172 61.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6716..6884 2953..3120 167 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2344..2417 2933..3009 161 71.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6913 2822..3009 152 59.9 Plus
roo 9092 roo DM_ROO 9092bp 1011..1141 2883..3009 151 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1528..1592 2954..3016 149 72.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6773..6950 2849..3017 147 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2577..2665 2914..3008 146 65.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6526..6588 2952..3016 140 70.8 Plus
Dvir\Tv1 6868 Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). 6229..6330 3894..3996 133 62.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2586..2642 2953..3009 132 70.2 Plus
G3 4605 G3 G3 4605bp 4076..4111 848..883 126 83.3 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 969..1012 2953..2999 120 76.6 Plus

GH08887.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:35:32 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 15621110..15621427 2050..2367 99 <- Minus
chr3R 15620521..15620849 2628..2956 99 == Minus
chr3R 15620964..15621000 2477..2513 100 == Minus
chr3R 15624293..15624396 1946..2049 100 <- Minus
chr3R 15620109..15620467 3010..3368 100 == Minus
chr3R 15618484..15619410 3369..4295 96 <- Minus
chr3R 15651561..15651799 1707..1945 100 == Minus
chr3R 15651892..15652950 557..1614 99 <- Minus
chr3R 15660166..15660719 1..556 93   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:36:34 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
bnl-RC 1..2283 1111..3393 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:53:04 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
bnl-RC 1..2283 1111..3393 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:45:00 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
bnl-RC 1..2283 1111..3393 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 17:44:11 has no hits.
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:52:24 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
bnl-RC 1..2283 1111..3393 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:36:32 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
bnl-RC 1..4295 1..4295 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:53:04 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
bnl-RC 1..4295 1..4295 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:00 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
bnl-RC 1..4295 1..4295 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:44:11 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
bnl-RA 1..3376 1..3380 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:52:24 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
bnl-RC 1..4295 1..4295 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:35:32 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19794589..19795515 3369..4295 100 <- Minus
3R 19796214..19797532 2050..3368 100 <- Minus
3R 19800398..19800501 1946..2049 100 <- Minus
3R 19827654..19829042 557..1945 100 <- Minus
3R 19836262..19836817 1..556 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:35:32 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19794589..19795515 3369..4295 100 <- Minus
3R 19796214..19797532 2050..3368 100 <- Minus
3R 19800398..19800501 1946..2049 100 <- Minus
3R 19827654..19829042 557..1945 100 <- Minus
3R 19836262..19836817 1..556 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:35:32 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19794589..19795515 3369..4295 100 <- Minus
3R 19796214..19797532 2050..3368 100 <- Minus
3R 19800398..19800501 1946..2049 100 <- Minus
3R 19827654..19829042 557..1945 100 <- Minus
3R 19836262..19836817 1..556 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:00 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15626120..15626223 1946..2049 100 <- Minus
arm_3R 15620311..15621237 3369..4295 100 <- Minus
arm_3R 15621936..15623254 2050..3368 100 <- Minus
arm_3R 15653376..15654764 557..1945 100 <- Minus
arm_3R 15661984..15662539 1..556 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:15:02 Download gff for GH08887.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19535420..19536346 3369..4295 100 <- Minus
3R 19537045..19538363 2050..3368 100 <- Minus
3R 19541229..19541332 1946..2049 100 <- Minus
3R 19568485..19569873 557..1945 100 <- Minus
3R 19577093..19577648 1..556 100   Minus

GH08887.pep Sequence

Translation from 1110 to 3392

> GH08887.pep
MRRNLRLDWRALALLGALLSFIIAWRGLVSAMPLMAMDNNLTDSSGSTNT
STSSTSKYNSTNNSNLFSNSYLQSDHSRSSLVPSAVSERSVNQPTNQSIN
AEFNQSLSTHPTAITSTPQTQTQTQIQSQYPSQAEDSDQLEEPLGFVISA
MPNEHLAVLSRTERSIRHQNQQQQKKHHHHHQQQQQQQHQQQQPMSPADN
NFIGSKSKRLSNPRSSLNINSSSSNTPISNLDRNERSTVPQSHLAWTSRK
IQLYIKNRILQILRDGVVNGTQDENSEFTILQRSTVDVGRIKLQSVATCL
YLCMDACGVPYGSKDFTDDCVFNENMGLQNYNTYSSTYHSQARRVFYLAL
NGSGQPRRTQIPASRSLGKLSTYTNAITETVPQERVEQLIAKNFGANRVK
HGVRQLCDTGKPLIELIDVARFKAPPHCSSNTSGSSSSISSSSSSSSKSS
SNSSSSYVPVSAISSLSSISNSSQSESGHISSSLSGSSNSNSSSNSSSSN
SSSNSSRPSGSKANKKKKPKCKPHEQEDTHNCQKRGGAGAGALRKLGPKA
KRCKELREKAAAEKRAPPNCGKKNGARKNPTEAAKAVQQRPKGNIQHGGK
KKPNKAGKQRQNGGKKQQQQQQHQLQQQPLQHQAKSISGGKRKHRKLDAS
TTTTMATSLGTPPSSHWESSSPLPAFSLSETSDRVERNVRMSSGEEQDQD
NDQDQEQSDPGEQGEEETEGDGGSLEDASYEDSSSEAQGRSGAGGDDSLY
YDFGLLSPRR*

GH08887.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 07:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17357-PA 722 GF17357-PA 1..706 1..753 1820 60.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 07:59:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15841-PA 708 GG15841-PA 1..694 1..756 2584 80.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 07:59:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23362-PA 517 GH23362-PA 13..513 279..752 714 45.6 Plus
Dgri\GH23354-PA 210 GH23354-PA 54..201 136..278 236 51 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:58:27
Subject Length Description Subject Range Query Range Score Percent Strand
bnl-PD 760 CG4608-PD 1..760 1..760 3896 100 Plus
bnl-PC 760 CG4608-PC 1..760 1..760 3896 100 Plus
bnl-PA 770 CG4608-PA 1..753 1..753 3861 100 Plus
Mur89F-PC 2158 CG4090-PC 387..689 429..748 224 27.1 Plus
Mur89F-PB 2159 CG4090-PB 387..689 429..748 224 27.1 Plus
Muc68D-PB 1514 CG6004-PB 569..1253 36..748 207 20.1 Plus
Mur89F-PC 2158 CG4090-PC 646..976 429..748 183 23.7 Plus
Mur89F-PB 2159 CG4090-PB 646..976 429..748 183 23.7 Plus
Mur89F-PC 2158 CG4090-PC 926..1198 429..684 171 26.3 Plus
Mur89F-PB 2159 CG4090-PB 926..1198 429..684 171 26.3 Plus
Mur89F-PC 2158 CG4090-PC 902..1196 429..748 170 23.8 Plus
Mur89F-PB 2159 CG4090-PB 902..1196 429..748 170 23.8 Plus
CG30389-PD 980 CG30389-PD 282..580 427..695 168 25.8 Plus
CG30389-PC 980 CG30389-PC 282..580 427..695 168 25.8 Plus
CG30389-PA 980 CG30389-PA 282..580 427..695 168 25.8 Plus
CG30389-PF 1009 CG30389-PF 282..580 427..695 168 25.8 Plus
PNUTS-PA 628 CG33526-PA 248..535 359..672 165 27.8 Plus
PNUTS-PB 628 CG33526-PB 248..535 359..672 165 27.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 07:59:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10332-PA 769 GI10332-PA 1..765 1..752 1309 53 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 07:59:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11947-PA 761 GL11947-PA 1..425 1..428 1296 69.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 07:59:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18297-PA 751 GA18297-PA 1..410 1..426 1308 67.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 07:59:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26894-PA 588 GM26894-PA 1..397 1..438 1574 78.3 Plus
Dsec\GM26894-PA 588 GM26894-PA 364..574 547..756 634 84.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 07:59:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20101-PA 762 GD20101-PA 1..748 1..756 3803 96 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 07:59:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10186-PA 740 GJ10186-PA 1..736 1..752 1359 51.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22814-PA 763 GK22814-PA 1..763 1..753 1514 54.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:00:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25113-PA 732 GE25113-PA 1..718 32..756 2609 85.5 Plus

GH08887.hyp Sequence

Translation from 1110 to 3392

> GH08887.hyp
MRRNLRLDWRALALLGALLSFIIAWRGLVSAMPLMAMDNNLTDSSGSTNT
STSSTSKYNSTNNSNLFSNSYLQSDHSRSSLVPSAVSERSVNQPTNQSIN
AEFNQSLSTHPTAITSTPQTQTQTQIQSQYPSQAEDSDQLEEPLGFVISA
MPNEHLAVLSRTERSIRHQNQQQQKKHHHHHQQQQQQQHQQQQPMSPADN
NFIGSKSKRLSNPRSSLNINSSSSNTPISNLDRNERSTVPQSHLAWTSRK
IQLYIKNRILQILRDGVVNGTQDENSEFTILQRSTVDVGRIKLQSVATCL
YLCMDACGVPYGSKDFTDDCVFNENMGLQNYNTYSSTYHSQARRVFYLAL
NGSGQPRRTQIPASRSLGKLSTYTNAITETVPQERVEQLIAKNFGANRVK
HGVRQLCDTGKPLIELIDVARFKAPPHCSSNTSGSSSSISSSSSSSSKSS
SNSSSSYVPVSAISSLSSISNSSQSESGHISSSLSGSSNSNSSSNSSSSN
SSSNSSRPSGSKANKKKKPKCKPHEQEDTHNCQKRGGAGAGALRKLGPKA
KRCKELREKAAAEKRAPPNCGKKNGARKNPTEAAKAVQQRPKGNIQHGGK
KKPNKAGKQRQNGGKKQQQQQQHQLQQQPLQHQAKSISGGKRKHRKLDAS
TTTTMATSLGTPPSSHWESSSPLPAFSLSETSDRVERNVRMSSGEEQDQD
NDQDQEQSDPGEQGEEETEGDGGSLEDASYEDSSSEAQGRSGAGGDDSLY
YDFGLLSPRR*

GH08887.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:41:23
Subject Length Description Subject Range Query Range Score Percent Strand
bnl-PD 760 CG4608-PD 1..760 1..760 3896 100 Plus
bnl-PC 760 CG4608-PC 1..760 1..760 3896 100 Plus
bnl-PA 770 CG4608-PA 1..753 1..753 3861 100 Plus
Mur89F-PC 2158 CG4090-PC 387..689 429..748 224 27.1 Plus
Mur89F-PB 2159 CG4090-PB 387..689 429..748 224 27.1 Plus
Mur89F-PC 2158 CG4090-PC 646..976 429..748 183 23.7 Plus
Mur89F-PC 2158 CG4090-PC 926..1198 429..684 171 26.3 Plus
Mur89F-PC 2158 CG4090-PC 902..1196 429..748 170 23.8 Plus