Clone GH08925 Report

Search the DGRC for GH08925

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:89
Well:25
Vector:pOT2
Associated Gene/TranscriptFkbp14-RA
Protein status:GH08925.pep: gold
Preliminary Size:1271
Sequenced Size:1018

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9847 2000-02-14 Blastp of sequenced clone
CG9847 2003-01-01 Sim4 clustering to Release 3
Fkbp13 2008-04-29 Release 5.5 accounting
Fkbp13 2008-08-15 Release 5.9 accounting
Fkbp13 2008-12-18 5.12 accounting

Clone Sequence Records

GH08925.complete Sequence

1018 bp (1018 high quality bases) assembled on 2000-02-14

GenBank Submission: AF132154

> GH08925.complete
AGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTTTCTCGCCCGCACT
TCGATCGAATCGGACGTGTTTGCACTTCACATCCGCCGTTTGCTCGCGTG
TTTTCTGTTGTTCGCCCGCCGCATCCGCCCCCGCCCCTTCGCCGGAATCG
AGTGATATCCGTCTGTGGAAGACCAAAGCCATGTCGAAATCCAATCTCGT
TATCTCGTGCCTTCTGCTGGTGGCCATCAGCAACAGCCTGGTCCGGGCTC
AGGATCTGAAAGTGGAGGTGATCAGCACGCCGGAGGTGTGCGAACAAAAG
TCCAAGAACGGCGATTCCCTCACCATGCACTACACTGGAACTCTGCAGGC
CGATGGCAAGAAATTCGACTCGAGCTTCGACCGCGACCAGCCCTTCACAT
TCCAATTGGGCGCCGGCCAGGTGATTAAGGGTTGGGATCAGGGTCTGCTC
AACATGTGCGTGGGTGAGAAGCGCAAGCTGACCATTCCTCCCCAGCTGGG
CTATGGTGACCAGGGTGCCGGCAACGTGATACCGCCCAAGGCCACCCTCC
TCTTCGATGTGGAGCTGATCAACATCGGCAATGCCCCGCCCACCACCAAT
GTGTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGA
GGTCAGCGAGTATCTAAAGAAGCAGATGACCGCCGTGGAGGGACAGGATT
CCGAGGAGCTGAAGAACATGCTGGCTGAGAACGACAAGCTGGTGGAGGAG
ATCTTTCAGCACGAGGATAAGGATAAGAACGGTTTCATCTCGCACGATGA
GTTCTCGGGACCCAAACACGACGAGCTGTAGTGCTCAATAATGGGGGTTC
TTGGTTTGCCGTCAACATCGAAGGGACACGAGTGCTTAAGTTATATAAAA
CCCAAATATATACACAAAAATAGAACATATACAACAGATGAGGCACGAGC
CGAGCAATAAATCGAGTGCAACCAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA

GH08925.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:41:16
Subject Length Description Subject Range Query Range Score Percent Strand
Fkbp13-RA 1402 Fkbp13-RA 41..981 36..976 4705 100 Plus
Fkbp13-RC 1365 Fkbp13-RC 147..944 179..976 3990 100 Plus
Fkbp13.a 1310 Fkbp13.a 2..619 36..653 3090 100 Plus
Fkbp13.a 1310 Fkbp13.a 630..954 652..976 1625 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:22:27
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 17374037..17374360 973..650 1560 98.8 Minus
chr2R 21145070 chr2R 17381629..17381826 374..177 960 99 Minus
chr2R 21145070 chr2R 17374530..17374720 653..463 940 99.5 Minus
chr2R 21145070 chr2R 17383552..17383694 178..36 715 100 Minus
chr2R 21145070 chr2R 17374784..17374876 465..373 465 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:39:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:22:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21487521..21487847 976..650 1635 100 Minus
2R 25286936 2R 21495131..21495328 374..177 990 100 Minus
2R 25286936 2R 21488017..21488207 653..463 955 100 Minus
2R 25286936 2R 21497064..21497206 178..36 715 100 Minus
2R 25286936 2R 21488271..21488363 465..373 465 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:02:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 21488720..21489046 976..650 1635 100 Minus
2R 25260384 2R 21496330..21496527 374..177 990 100 Minus
2R 25260384 2R 21489216..21489406 653..463 955 100 Minus
2R 25260384 2R 21498263..21498405 178..36 715 100 Minus
2R 25260384 2R 21489470..21489562 465..373 465 100 Minus
Blast to na_te.dros performed on 2019-03-15 19:22:25 has no hits.

GH08925.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:23:34 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 17374037..17374358 652..973 98 <- Minus
chr2R 17374532..17374719 464..651 99 <- Minus
chr2R 17374786..17374874 375..463 100 <- Minus
chr2R 17381629..17381824 179..374 98 <- Minus
chr2R 17383552..17383696 36..178 98 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:29:08 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp13-RC 1..651 181..831 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:33:54 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp13-RC 1..651 181..831 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:48:26 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 1..651 181..831 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:08:26 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp13-RB 41..696 173..831 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:15:36 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 1..651 181..831 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:36:13 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp13-RA 3..940 36..973 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:33:54 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp13-RA 3..940 36..973 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:48:26 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RA 5..942 36..973 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:08:26 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp13-RA 3..940 36..973 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:15:36 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RA 5..942 36..973 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:23:34 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21495131..21495326 179..374 100 <- Minus
2R 21497064..21497208 35..178 98 <- Minus
2R 21487524..21487845 652..973 100 <- Minus
2R 21488019..21488206 464..651 100 <- Minus
2R 21488273..21488361 375..463 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:23:34 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21495131..21495326 179..374 100 <- Minus
2R 21497064..21497208 35..178 98 <- Minus
2R 21487524..21487845 652..973 100 <- Minus
2R 21488019..21488206 464..651 100 <- Minus
2R 21488273..21488361 375..463 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:23:34 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21495131..21495326 179..374 100 <- Minus
2R 21497064..21497208 35..178 98 <- Minus
2R 21487524..21487845 652..973 100 <- Minus
2R 21488019..21488206 464..651 100 <- Minus
2R 21488273..21488361 375..463 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:48:26 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17375029..17375350 652..973 100 <- Minus
arm_2R 17375524..17375711 464..651 100 <- Minus
arm_2R 17375778..17375866 375..463 100 <- Minus
arm_2R 17382636..17382831 179..374 100 <- Minus
arm_2R 17384569..17384713 35..178 98 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:46:00 Download gff for GH08925.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21489218..21489405 464..651 100 <- Minus
2R 21489472..21489560 375..463 100 <- Minus
2R 21496330..21496525 179..374 100 <- Minus
2R 21498263..21498407 35..178 98 <- Minus
2R 21488723..21489044 652..973 100 <- Minus

GH08925.hyp Sequence

Translation from 35 to 830

> GH08925.hyp
HFSPALRSNRTCLHFTSAVCSRVFCCSPAASAPAPSPESSDIRLWKTKAM
SKSNLVISCLLLVAISNSLVRAQDLKVEVISTPEVCEQKSKNGDSLTMHY
TGTLQADGKKFDSSFDRDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKLT
IPPQLGYGDQGAGNVIPPKATLLFDVELINIGNAPPTTNVFKEIDDNADK
QLSREEVSEYLKKQMTAVEGQDSEELKNMLAENDKLVEEIFQHEDKDKNG
FISHDEFSGPKHDEL*

GH08925.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
Fkbp14-PF 216 CG9847-PF 1..216 50..265 1117 100 Plus
Fkbp14-PE 216 CG9847-PE 1..216 50..265 1117 100 Plus
Fkbp14-PC 216 CG9847-PC 1..216 50..265 1117 100 Plus
Fkbp14-PA 216 CG9847-PA 1..216 50..265 1117 100 Plus
Fkbp14-PD 220 CG9847-PD 1..220 50..265 1102 98.2 Plus

GH08925.pep Sequence

Translation from 180 to 830

> GH08925.pep
MSKSNLVISCLLLVAISNSLVRAQDLKVEVISTPEVCEQKSKNGDSLTMH
YTGTLQADGKKFDSSFDRDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKL
TIPPQLGYGDQGAGNVIPPKATLLFDVELINIGNAPPTTNVFKEIDDNAD
KQLSREEVSEYLKKQMTAVEGQDSEELKNMLAENDKLVEEIFQHEDKDKN
GFISHDEFSGPKHDEL*

GH08925.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:41:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12094-PA 214 GF12094-PA 1..214 1..216 1069 94 Plus
Dana\GF18389-PA 137 GF18389-PA 3..128 8..132 305 54.3 Plus
Dana\GF11585-PA 108 GF11585-PA 18..107 42..132 268 53.8 Plus
Dana\GF14673-PA 440 GF14673-PA 32..168 43..176 235 38.1 Plus
Dana\GF23032-PA 358 GF23032-PA 265..357 39..132 210 48.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:41:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20775-PA 231 GG20775-PA 16..231 1..216 1114 97.2 Plus
Dere\GG18343-PA 138 GG18343-PA 1..129 1..132 291 50.4 Plus
Dere\GG21957-PA 108 GG21957-PA 18..107 42..132 268 53.8 Plus
Dere\GG20671-PA 355 GG20671-PA 262..351 39..129 234 48.4 Plus
Dere\GG10059-PA 439 GG10059-PA 31..117 43..130 221 46.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:41:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20056-PA 212 GH20056-PA 4..212 5..216 984 89.2 Plus
Dgri\GH18265-PA 138 GH18265-PA 7..130 6..132 308 55.5 Plus
Dgri\GH23096-PA 108 GH23096-PA 1..107 26..132 270 48.1 Plus
Dgri\GH11297-PA 441 GH11297-PA 32..118 43..130 220 46.6 Plus
Dgri\GH21813-PA 365 GH21813-PA 261..361 21..129 212 46.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:11:28
Subject Length Description Subject Range Query Range Score Percent Strand
Fkbp14-PF 216 CG9847-PF 1..216 1..216 1117 100 Plus
Fkbp14-PE 216 CG9847-PE 1..216 1..216 1117 100 Plus
Fkbp14-PC 216 CG9847-PC 1..216 1..216 1117 100 Plus
Fkbp14-PA 216 CG9847-PA 1..216 1..216 1117 100 Plus
Fkbp14-PD 220 CG9847-PD 1..220 1..216 1102 98.2 Plus
CG14715-PA 138 CG14715-PA 8..129 11..132 324 52.8 Plus
Fkbp12-PA 108 CG11001-PA 18..107 42..132 269 53.8 Plus
Fkbp39-PA 357 CG6226-PA 264..353 39..129 220 47.3 Plus
Fkbp59-PB 439 CG4535-PB 31..117 43..130 211 46.6 Plus
Fkbp59-PA 439 CG4535-PA 31..117 43..130 211 46.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:41:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20465-PA 424 GI20465-PA 216..424 5..216 1003 88.2 Plus
Dmoj\GI24072-PA 139 GI24072-PA 5..130 9..132 303 54.3 Plus
Dmoj\GI18922-PA 108 GI18922-PA 18..107 42..132 265 52.7 Plus
Dmoj\GI21928-PA 370 GI21928-PA 266..366 21..129 228 43.1 Plus
Dmoj\GI17716-PA 441 GI17716-PA 33..118 44..130 218 46 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:41:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17491-PA 214 GL17491-PA 19..214 21..216 1023 96.9 Plus
Dper\GL22120-PA 139 GL22120-PA 3..130 8..132 292 51.9 Plus
Dper\GL17641-PA 108 GL17641-PA 18..107 42..132 264 52.7 Plus
Dper\GL24296-PA 342 GL24296-PA 251..341 41..132 231 46.7 Plus
Dper\GL18937-PA 440 GL18937-PA 32..118 43..130 223 46.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:41:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22070-PA 214 GA22070-PA 19..214 21..216 1023 96.9 Plus
Dpse\GA13197-PA 139 GA13197-PA 3..130 8..132 292 51.9 Plus
Dpse\GA10702-PA 108 GA10702-PA 18..107 42..132 264 52.7 Plus
Dpse\GA26561-PA 341 GA26561-PA 250..340 41..132 231 46.7 Plus
Dpse\GA18239-PA 440 GA18239-PA 32..118 43..130 223 46.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:41:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15719-PA 231 GM15719-PA 16..231 1..216 1123 98.1 Plus
Dsec\GM23968-PA 138 GM23968-PA 6..129 11..132 294 54.4 Plus
Dsec\GM21945-PA 108 GM21945-PA 18..107 42..132 269 53.8 Plus
Dsec\GM25784-PA 349 GM25784-PA 256..345 39..129 231 47.3 Plus
Dsec\GM17712-PA 439 GM17712-PA 31..117 43..130 221 46.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:41:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25197-PA 231 GD25197-PA 16..231 1..216 1122 98.1 Plus
Dsim\GD18774-PA 138 GD18774-PA 1..129 1..132 297 51.1 Plus
Dsim\GD20361-PA 348 GD20361-PA 255..344 39..129 229 47.3 Plus
Dsim\GD23632-PA 402 GD23632-PA 31..117 43..130 218 46.6 Plus
Dsim\GD11442-PA 137 GD11442-PA 18..86 42..111 207 52.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:41:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22316-PA 212 GJ22316-PA 4..212 5..216 991 87.7 Plus
Dvir\GJ10892-PA 138 GJ10892-PA 7..130 6..132 299 54.7 Plus
Dvir\GJ19778-PA 108 GJ19778-PA 18..107 42..132 269 53.8 Plus
Dvir\GJ17544-PA 441 GJ17544-PA 32..118 43..130 218 45.5 Plus
Dvir\GJ14288-PA 359 GJ14288-PA 268..355 41..129 196 47.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:41:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20742-PA 211 GK20742-PA 1..211 1..216 1042 92.1 Plus
Dwil\GK22382-PA 139 GK22382-PA 7..131 6..132 286 51.6 Plus
Dwil\GK20673-PA 108 GK20673-PA 1..107 26..132 266 47.2 Plus
Dwil\GK23813-PA 440 GK23813-PA 32..118 43..130 228 46.6 Plus
Dwil\GK11959-PA 358 GK11959-PA 265..357 39..132 208 46.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:41:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\Fkbp13-PA 231 GE13712-PA 16..231 1..216 1106 96.8 Plus
Dyak\GE24193-PA 138 GE24193-PA 3..129 8..132 295 53.1 Plus
Dyak\FK506-bp2-PA 108 GE12036-PA 18..107 42..132 269 53.8 Plus
Dyak\GE26389-PA 353 GE26389-PA 260..349 39..129 231 47.3 Plus
Dyak\FKBP59-PA 439 GE18873-PA 31..117 43..130 222 46.6 Plus