BDGP Sequence Production Resources |
Search the DGRC for GH08937
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 89 |
Well: | 37 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5703-RA |
Protein status: | GH08937.pep: gold |
Preliminary Size: | 1064 |
Sequenced Size: | 934 |
Gene | Date | Evidence |
---|---|---|
CG5703 | 2001-01-01 | Release 2 assignment |
CG5703 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5703 | 2003-01-15 | Blastp of sequenced clone |
CG5703 | 2008-04-29 | Release 5.5 accounting |
CG5703 | 2008-08-15 | Release 5.9 accounting |
CG5703 | 2008-12-18 | 5.12 accounting |
934 bp (934 high quality bases) assembled on 2003-01-15
GenBank Submission: AY075322
> GH08937.complete AAAAAAACTGACAGCAGCCGACGGACTTCACATAACATAAGAGCAAATTT TCAGCCTTTTCATTATTTTGGAAACGCCAGAATGCTGACAAACTGTGCCT CCAAAACACTGGCCGCCGTGCGCGCCAACATCCGGGCAATTGCCACCAGC AGTGCCCGGGCCAGCGACAATCTGTTCGTCCATCGCGACACACCGGAGGA TAATCCCAACATCCCGTTCGAGTTCACGGCGGAGAACAAGAAGCGCGTGG AGGCCATACTCAGCATCTATCCGGAGGGGCACAAGCGCGGCGCCATGATC CCGCTGCTTGATCTGGCACAGCGCCAGTACGGCTGGCTGCCAATCTCTGC CATGCACAAGGTGGCCGAGATTCTCCAGTTGCCCAATATGCGCGTCTACG AGGTGGCCACTTTCTATACGATGTTCATGCGCAAGCCCACTGGCAAGTAT CACATCCAGGTGTGCACCACCACACCATGCTGGCTCCGCGGATCGGACGA CATCCTGGAGACCTGCAAGAAGCAGCTGGGCATCGGCGTCGGCGACACCA CCAAGGACAGGAAGTTCACCATCTCGGAGGTCGAGTGCTTGGGCGCCTGT GTCAATGCGCCAATGGTGGCGATCAACGATGACTACTATGAGGATCTGAC ATCCAAGGACATGCAGGACATCCTGAACGACCTGAAGGCGGATAAGATAT CGCCCCCTGGGCCACGCAACGGACGCTTTGCCAGCGAGCCAAAGGGCGAG CCCACTTCCCTGAGCGAGGAGCCCAAGGGTCCTGGCTTTGGTCTGCAGGC CGGTCTGTAGAGGATGAGCAAGGAGCAGAACCTATCACTGATTGTCGAAC GAAAGTTAAATAAATGTTAAGCAACTTATAGAGGTCAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 17521914..17522434 | 120..640 | 2605 | 100 | Plus |
chrX | 22417052 | chrX | 17522588..17522834 | 640..886 | 1235 | 100 | Plus |
chrX | 22417052 | chrX | 17521666..17521785 | 1..120 | 600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 17521666..17521785 | 1..120 | 100 | -> | Plus |
chrX | 17521915..17522433 | 121..639 | 100 | -> | Plus |
chrX | 17522588..17522834 | 640..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5703-RA | 1..729 | 82..810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5703-RA | 1..729 | 82..810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5703-RA | 1..729 | 82..810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5703-RA | 1..729 | 82..810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5703-RA | 1..729 | 82..810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5703-RA | 179..1061 | 1..883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5703-RA | 179..1061 | 1..883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5703-RA | 179..1064 | 1..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5703-RA | 179..1061 | 1..883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5703-RA | 179..1064 | 1..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17632341..17632460 | 1..120 | 100 | -> | Plus |
X | 17632590..17633108 | 121..639 | 100 | -> | Plus |
X | 17633263..17633509 | 640..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17632341..17632460 | 1..120 | 100 | -> | Plus |
X | 17632590..17633108 | 121..639 | 100 | -> | Plus |
X | 17633263..17633509 | 640..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17632341..17632460 | 1..120 | 100 | -> | Plus |
X | 17632590..17633108 | 121..639 | 100 | -> | Plus |
X | 17633263..17633509 | 640..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 17526374..17526493 | 1..120 | 100 | -> | Plus |
arm_X | 17526623..17527141 | 121..639 | 100 | -> | Plus |
arm_X | 17527296..17527542 | 640..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17640688..17641206 | 121..639 | 100 | -> | Plus |
X | 17641361..17641607 | 640..886 | 100 | Plus | |
X | 17640439..17640558 | 1..120 | 100 | -> | Plus |
Translation from 1 to 809
> GH08937.hyp KKTDSSRRTSHNIRANFQPFHYFGNARMLTNCASKTLAAVRANIRAIATS SARASDNLFVHRDTPEDNPNIPFEFTAENKKRVEAILSIYPEGHKRGAMI PLLDLAQRQYGWLPISAMHKVAEILQLPNMRVYEVATFYTMFMRKPTGKY HIQVCTTTPCWLRGSDDILETCKKQLGIGVGDTTKDRKFTISEVECLGAC VNAPMVAINDDYYEDLTSKDMQDILNDLKADKISPPGPRNGRFASEPKGE PTSLSEEPKGPGFGLQAGL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5703-PB | 242 | CG5703-PB | 1..242 | 28..269 | 1276 | 100 | Plus |
CG5703-PA | 242 | CG5703-PA | 1..242 | 28..269 | 1276 | 100 | Plus |
CG6485-PA | 238 | CG6485-PA | 32..227 | 71..266 | 600 | 55.6 | Plus |
Translation from 81 to 809
> GH08937.pep MLTNCASKTLAAVRANIRAIATSSARASDNLFVHRDTPEDNPNIPFEFTA ENKKRVEAILSIYPEGHKRGAMIPLLDLAQRQYGWLPISAMHKVAEILQL PNMRVYEVATFYTMFMRKPTGKYHIQVCTTTPCWLRGSDDILETCKKQLG IGVGDTTKDRKFTISEVECLGACVNAPMVAINDDYYEDLTSKDMQDILND LKADKISPPGPRNGRFASEPKGEPTSLSEEPKGPGFGLQAGL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22392-PA | 242 | GF22392-PA | 1..242 | 1..242 | 1223 | 92.6 | Plus |
Dana\GF24324-PA | 236 | GF24324-PA | 27..230 | 36..239 | 616 | 55.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19123-PA | 242 | GG19123-PA | 1..242 | 1..242 | 1294 | 98.8 | Plus |
Dere\GG15826-PA | 238 | GG15826-PA | 7..227 | 16..239 | 608 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24933-PA | 242 | GH24933-PA | 1..242 | 1..242 | 1210 | 90.9 | Plus |
Dgri\GH14917-PA | 248 | GH14917-PA | 45..238 | 46..239 | 584 | 54.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ND-24-PB | 242 | CG5703-PB | 1..242 | 1..242 | 1276 | 100 | Plus |
ND-24-PA | 242 | CG5703-PA | 1..242 | 1..242 | 1276 | 100 | Plus |
ND-24L-PA | 238 | CG6485-PA | 32..227 | 44..239 | 600 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14890-PA | 242 | GI14890-PA | 1..242 | 1..242 | 1235 | 93 | Plus |
Dmoj\GI12897-PA | 246 | GI12897-PA | 21..237 | 17..239 | 586 | 49.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20163-PA | 264 | GL20163-PA | 1..239 | 1..239 | 1179 | 88.7 | Plus |
Dper\GL15498-PA | 190 | GL15498-PA | 41..173 | 43..175 | 417 | 54.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19069-PA | 264 | GA19069-PA | 1..239 | 1..239 | 1177 | 88.7 | Plus |
Dpse\GA19629-PA | 245 | GA19629-PA | 41..237 | 43..239 | 586 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13517-PA | 242 | GM13517-PA | 1..242 | 1..242 | 1307 | 100 | Plus |
Dsec\GM24346-PA | 241 | GM24346-PA | 3..230 | 8..239 | 608 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15675-PA | 242 | GD15675-PA | 1..242 | 1..242 | 1307 | 100 | Plus |
Dsim\GD12420-PA | 238 | GD12420-PA | 27..227 | 39..239 | 602 | 54.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15322-PA | 129 | GJ15322-PA | 1..129 | 114..242 | 656 | 93 | Plus |
Dvir\GJ13038-PA | 247 | GJ13038-PA | 41..237 | 43..239 | 594 | 55.3 | Plus |
Dvir\GJ15321-PA | 71 | GJ15321-PA | 1..70 | 1..70 | 319 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25091-PA | 242 | GK25091-PA | 1..242 | 1..242 | 1206 | 90.9 | Plus |