BDGP Sequence Production Resources |
Search the DGRC for GH08974
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 89 |
Well: | 74 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6950-RA |
Protein status: | GH08974.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1584 |
Gene | Date | Evidence |
---|---|---|
CG6950 | 2001-01-01 | Release 2 assignment |
CG6950 | 2002-03-28 | Blastp of sequenced clone |
CG6950 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6950 | 2008-04-29 | Release 5.5 accounting |
CG6950 | 2008-08-15 | Release 5.9 accounting |
CG6950 | 2008-12-18 | 5.12 accounting |
1584 bp (1584 high quality bases) assembled on 2002-03-28
GenBank Submission: AY094691
> GH08974.complete CAGCATTTAACTCAACAATTGCATTTAAAAGTAAACCAGTGATATAGTTT ATTGTTACATTTGAGATCAGACATCAGACCCGCAGAGACGACAGGCAAAG TGCGTGCTTATCGCGCAATAAACAATCCAGACACGCGGTGATAAGGCGAA AGGGAGCGATCATTCACTAAAGTCACCTTTTTACAGATGCTACGCAGCTG TCAGTTAACCCTCTCCGCCGCTAAGAGGAGCCTTCGCGAGCAGTTCCAGT TGCAAGCCCTTCGTCACCAGCAGACTGCCATTAAAATGGAGAAATTCGAT CTGCCCAAGCGATTGCAGGGTAGCACGCCCAGCGTCTGGAACGAGTACAT TGCCCTGGCCATGCAATATAAGCCCCTGAACTTGGGACAGGGATTTCCCG ATGATGCCGCTCCCGAGTACGTGACCCACTCGTTGGCCGACATTGCCAAG GAGCAGAATCCTCTTCTGCATCAGTACACTCGCGGTTACGGTCACGTTCG CCTGGTCAATGCGCTATCCAAGCTCTATAGCGGTCTCGTCGGCAAGGAGC TAAATCCCCTCAGCGACATACTGATTACCTCAGGCGCCTATGAGGCTCTC TACTCCACCATCATGGGCCATGTGGACGTGGGCGACGAGGTGATCATTAT TGAACCATTCTTTGATTGCTACGAGCCTATGGTCAAGATGGCCGGTGGAG TGCCCCGCTTTGTTCCCCTAAAATTGCGCAAGACAGAGGGACCAATAAGC TCTGCCGATTGGGTGCTAGATGACGCTGAGTTCGAGAGTCTGTTCAACTC TAAAACAAAGATGATTATCCTAAACACGCCCCACAACCCTATTGGAAAGG TCTTCAACCGGAAAGAGCTAGAGAGGATAGCCGAGCTCTGCCGCAAGTGG AATGTGCTGTGCGTCTCGGACGAGGTGTATGAGTGGTTGGTGTTCGACGG AGCCGAGCACATCCGTATCTGCACGCTGCCGGGCATGTGGGATCGCACCA TTACTCTGGGATCAGCGGGCAAGACCTTCTCAGTAACTGGTTGGAAAATA GGCTGGGCCTACGGACCCGCTGAACTGATTCGAAACCTGCAGATGGTGCA TCAGAACTCTGTGTACACCTGTCCAACGCCGCTCCAGGAGGGCGTCGCAC GCAGTTTCGAGGTAGAACTGGCCCGTTTGGGTCAGCCGGAGAGCTACTTC CTTAGCCTGCCGCGCGAGCTGAAGCAGAAGCGTGACTTCATGGCCAAGTT CCTGTCCGAATCCGGTATGCGTCCCACCATTCCTGAGGGTGGCTACTTTA TGCTGGCAGACTGGTCACCACTGGCGGGCAAGATTGATCTAAGCTCTGAG CCAGACAAGCATCGGGATTACAAGTTTACCAAGTGGATGACCAAGAACAT GGGCTTGCAGGGCATACCGCCAAGTGCCTTCTACAGCGAACCCAACAAAC ATCTGGGGGAGGACTTTGTGCGCTACTGCTTCATCAAGAAGCAAGAGAAC CTGGATAAGGCGGCCGAACTGCTGTCCAAATGGAAATAGTCGCCGGACAA TAAACGAATTGCTATCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6950-RB | 1675 | CG6950-RB | 107..1673 | 1..1567 | 7835 | 100 | Plus |
CG6950.b | 1560 | CG6950.b | 137..1558 | 146..1567 | 7110 | 100 | Plus |
CG6950-RA | 1668 | CG6950-RA | 286..1666 | 187..1567 | 6905 | 100 | Plus |
CG6950-RA | 1668 | CG6950-RA | 187..289 | 1..103 | 500 | 99 | Plus |
CG6950.b | 1560 | CG6950.b | 107..137 | 1..31 | 155 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7645903..7646742 | 727..1566 | 99 | <- | Minus |
chr3R | 7646798..7647523 | 1..726 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6950-RB | 1..1353 | 187..1539 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6950-RB | 1..1353 | 187..1539 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6950-RA | 1..1353 | 187..1539 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6950-RB | 1..1353 | 187..1539 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6950-RA | 1..1353 | 187..1539 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6950-RB | 1..1563 | 4..1566 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6950-RB | 1..1563 | 4..1566 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6950-RB | 73..1638 | 1..1566 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6950-RB | 1..1563 | 4..1566 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6950-RB | 73..1638 | 1..1566 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11820381..11821220 | 727..1566 | 100 | <- | Minus |
3R | 11821280..11822005 | 1..726 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11820381..11821220 | 727..1566 | 100 | <- | Minus |
3R | 11821280..11822005 | 1..726 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11820381..11821220 | 727..1566 | 100 | <- | Minus |
3R | 11821280..11822005 | 1..726 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7646103..7646942 | 727..1566 | 100 | <- | Minus |
arm_3R | 7647002..7647727 | 1..726 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11561212..11562051 | 727..1566 | 100 | <- | Minus |
3R | 11562111..11562836 | 1..726 | 100 | Minus |
Translation from 186 to 1538
> GH08974.pep MLRSCQLTLSAAKRSLREQFQLQALRHQQTAIKMEKFDLPKRLQGSTPSV WNEYIALAMQYKPLNLGQGFPDDAAPEYVTHSLADIAKEQNPLLHQYTRG YGHVRLVNALSKLYSGLVGKELNPLSDILITSGAYEALYSTIMGHVDVGD EVIIIEPFFDCYEPMVKMAGGVPRFVPLKLRKTEGPISSADWVLDDAEFE SLFNSKTKMIILNTPHNPIGKVFNRKELERIAELCRKWNVLCVSDEVYEW LVFDGAEHIRICTLPGMWDRTITLGSAGKTFSVTGWKIGWAYGPAELIRN LQMVHQNSVYTCPTPLQEGVARSFEVELARLGQPESYFLSLPRELKQKRD FMAKFLSESGMRPTIPEGGYFMLADWSPLAGKIDLSSEPDKHRDYKFTKW MTKNMGLQGIPPSAFYSEPNKHLGEDFVRYCFIKKQENLDKAAELLSKWK *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23062-PA | 417 | GF23062-PA | 1..417 | 34..450 | 2134 | 93.3 | Plus |
Dana\GF22556-PA | 502 | GF22556-PA | 121..451 | 63..415 | 239 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17186-PA | 450 | GG17186-PA | 1..450 | 1..450 | 2394 | 98.2 | Plus |
Dere\GG17840-PA | 508 | GG17840-PA | 126..456 | 63..415 | 232 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19404-PA | 417 | GH19404-PA | 1..417 | 34..450 | 2041 | 89 | Plus |
Dgri\GH12929-PA | 483 | GH12929-PA | 158..431 | 126..415 | 236 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6950-PD | 450 | CG6950-PD | 1..450 | 1..450 | 2387 | 100 | Plus |
CG6950-PB | 450 | CG6950-PB | 1..450 | 1..450 | 2387 | 100 | Plus |
CG6950-PA | 450 | CG6950-PA | 1..450 | 1..450 | 2387 | 100 | Plus |
CG6950-PC | 450 | CG6950-PC | 1..450 | 1..450 | 2387 | 100 | Plus |
CG1461-PB | 501 | CG1461-PB | 176..449 | 126..415 | 225 | 23.5 | Plus |
CG1461-PA | 501 | CG1461-PA | 176..449 | 126..415 | 225 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22608-PA | 417 | GI22608-PA | 1..415 | 34..448 | 2050 | 90.4 | Plus |
Dmoj\GI15439-PA | 479 | GI15439-PA | 125..392 | 97..373 | 230 | 25.3 | Plus |
Dmoj\GI13866-PA | 421 | GI13866-PA | 22..407 | 61..445 | 187 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12368-PA | 457 | GL12368-PA | 1..457 | 1..450 | 2171 | 89.3 | Plus |
Dper\GL14927-PA | 501 | GL14927-PA | 174..447 | 126..415 | 246 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19977-PA | 457 | GA19977-PA | 1..457 | 1..450 | 2154 | 88.8 | Plus |
Dpse\GA13109-PA | 497 | GA13109-PA | 170..443 | 126..415 | 246 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26066-PA | 450 | GM26066-PA | 1..450 | 1..450 | 2405 | 98.9 | Plus |
Dsec\GM17670-PA | 503 | GM17670-PA | 178..451 | 126..415 | 229 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20629-PA | 450 | GD20629-PA | 1..450 | 1..450 | 2400 | 98.7 | Plus |
Dsim\GD17166-PA | 395 | GD17166-PA | 111..343 | 126..415 | 201 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23853-PA | 417 | GJ23853-PA | 1..416 | 34..449 | 2091 | 91.6 | Plus |
Dvir\GJ19064-PA | 470 | GJ19064-PA | 121..423 | 97..415 | 236 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12747-PA | 448 | GK12747-PA | 1..448 | 1..450 | 2086 | 85 | Plus |
Dwil\GK20156-PA | 513 | GK20156-PA | 125..455 | 63..415 | 229 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10079-PA | 450 | GE10079-PA | 1..450 | 1..450 | 2366 | 97.1 | Plus |
Dyak\GE17134-PA | 500 | GE17134-PA | 175..448 | 126..415 | 226 | 24.4 | Plus |
Dyak\GE20247-PA | 418 | GE20247-PA | 22..412 | 61..450 | 154 | 24.3 | Plus |
Dyak\GE20248-PA | 416 | GE20248-PA | 22..410 | 61..450 | 153 | 24.1 | Plus |
Translation from 186 to 1538
> GH08974.hyp MLRSCQLTLSAAKRSLREQFQLQALRHQQTAIKMEKFDLPKRLQGSTPSV WNEYIALAMQYKPLNLGQGFPDDAAPEYVTHSLADIAKEQNPLLHQYTRG YGHVRLVNALSKLYSGLVGKELNPLSDILITSGAYEALYSTIMGHVDVGD EVIIIEPFFDCYEPMVKMAGGVPRFVPLKLRKTEGPISSADWVLDDAEFE SLFNSKTKMIILNTPHNPIGKVFNRKELERIAELCRKWNVLCVSDEVYEW LVFDGAEHIRICTLPGMWDRTITLGSAGKTFSVTGWKIGWAYGPAELIRN LQMVHQNSVYTCPTPLQEGVARSFEVELARLGQPESYFLSLPRELKQKRD FMAKFLSESGMRPTIPEGGYFMLADWSPLAGKIDLSSEPDKHRDYKFTKW MTKNMGLQGIPPSAFYSEPNKHLGEDFVRYCFIKKQENLDKAAELLSKWK *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6950-PD | 450 | CG6950-PD | 1..450 | 1..450 | 2387 | 100 | Plus |
CG6950-PB | 450 | CG6950-PB | 1..450 | 1..450 | 2387 | 100 | Plus |
CG6950-PA | 450 | CG6950-PA | 1..450 | 1..450 | 2387 | 100 | Plus |
CG6950-PC | 450 | CG6950-PC | 1..450 | 1..450 | 2387 | 100 | Plus |
CG1461-PB | 501 | CG1461-PB | 176..449 | 126..415 | 225 | 23.5 | Plus |