BDGP Sequence Production Resources |
Search the DGRC for GH08991
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 89 |
Well: | 91 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4287-RA |
Protein status: | GH08991.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1648 |
Gene | Date | Evidence |
---|---|---|
CG4287 | 2001-01-01 | Release 2 assignment |
CG4287 | 2001-09-19 | Blastp of sequenced clone |
CG4287 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4287 | 2008-04-29 | Release 5.5 accounting |
CG4287 | 2008-08-15 | Release 5.9 accounting |
CG4287 | 2008-12-18 | 5.12 accounting |
1648 bp (1648 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058321
> GH08991.complete ATCGAACTCAACAGCTGCTTGCCTAATTTGTGTCTACCTGGTTTATGTTG AAATGTCTGAATTTTAAAGTTAATTAAGCCAAAATTTAAGTGCATTATGC ATGGTCGTAAAAAAAATAAGAAATAAGCAACAGCTGACAGCTATTTCACC CTTAATTGACTGGCACAAATTGCTTGGTCAAACAATAACAAAAGCGCTGT GCTGACTAAGCGGCGAAAGTGGTTGCAACAAAGTCCAATCACTATCAATC GCTAGCCATGGACAACAGCGCGTTGATGCCACAGGCGAGCGGACGTCATA TGCCGCCCGAGGAACTGGCCATGCAAGCACTAACCAAGCAGCTTTACAAG TCTCGTCTCTTCCGCGGTTATTATATGGAACGCTGCTTGGTGGAGCAGGT GTCCGGCTACCGGGACGTGGTGGTGCTTCAACGCAGTGAGCGAGAGTTGG AGAAGCTGCTGCACTCGAGTGCCGGCCAATTACAAAAGTTTTATCAACGC TTCGTGCCCAATATGTGGGTGGGCATCACCTATGGGAGTTACGGAAGTTA CCAGCACAAAGCAGATCCTGGTCAACTGGAAACCTGCATCTGGACAGAGA TGAATGATCTGGCTTTTGGAGAGTATTGGTTTAGCATCAAGACCCTTCGC TTCCGGGACCATGAAGTCCAGTTCAAACTGAAGATGATAAGGCCCGTGGA GCCAGAGCTGATGGCGACGCCGAGGAGATCACTGATTCTTAATAGAAGTA GCCCTGTTAAGGCGATCACAGCGGGTGGGGAAAACTCCTCCTCCAAGCCG GATGAAGTGGCGGAGCAAATTCAGCTGGGCCTTAATGATTTTTTGGCTGT GCTGCAACAGTGGGGTGATGGAGTCAAACAAACCGTGTACGACTTCATGA CCAACGATGTCAACAAGAGGAACATTTTGGGCACCATTCGGTTTCTGGGT CTACTAATTTTCTCTGCCTTGGGTGGAGCCGCACTAGCGCTACGATTCCT AGGCGTATTTGCTGTGCGATTCCTGTTTGAGCTGAGTCGTTTCACACATA CAGCCACTCCAATAGTGTTTAAACTAATCGAGTTTCTGAACAAGATTGTG GGTGCTATCTTCATACTTTTGACCATGATTTGGAAAGACATTGTCACTCG TGGACATCCGGAACCGAAACAGCAGCAGCTGCATCTGGAGGCAAGTAGCC GCTTCAAGAGCATCCAATACGAGCGTTCCGAACCAAATCGACGTAGTCCC CGGTGGTGACCCGCCACTAAAAGCACATTAATGTCTAGCAAAGTGTTCCG AGGTGTAAGGGCAACGAAAAATCATTGAAATTGTGTTACTAGCCGTAAGC AAAGCGAAGCCAATCCCAATCCCCGCTTCGAGTCCGAGGGTATTTGCCCT GCAAATATGGGGACACCTATGAGATTTACAGATTTTAGTCAATTGCAATA TTGTAAATTATTAATTGGCGTGCCACTGGCGCACAATCGCATGCTTATTA ACCCCACTGTTAATTCATTGTGTATTGTCCAAAAATATGTTTTATTAAAT CCGTTTAGTGTTAGATCCTGTAATTTATGTATCGAAAATTATTGTGAATA AATTGAATGCAATATGCGAAAATCGAAATGAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11786765..11788143 | 252..1630 | 99 | <- | Minus |
chr3R | 11788197..11788447 | 1..251 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4287-RA | 1..1002 | 258..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4287-RB | 1..1002 | 258..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4287-RA | 1..1002 | 258..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4287-RA | 1..1002 | 258..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4287-RA | 1..1002 | 258..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4287-RA | 1..1630 | 1..1630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4287-RA | 1..1630 | 1..1630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4287-RA | 1..1630 | 1..1630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4287-RA | 1..1630 | 1..1630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4287-RA | 19..1648 | 1..1630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15962167..15963545 | 252..1630 | 100 | <- | Minus |
3R | 15963599..15963849 | 1..251 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15962167..15963545 | 252..1630 | 100 | <- | Minus |
3R | 15963599..15963849 | 1..251 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15962167..15963545 | 252..1630 | 100 | <- | Minus |
3R | 15963599..15963849 | 1..251 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11787889..11789267 | 252..1630 | 100 | <- | Minus |
arm_3R | 11789321..11789571 | 1..251 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15702998..15704376 | 252..1630 | 100 | <- | Minus |
3R | 15704430..15704680 | 1..251 | 100 | Minus |
Translation from 257 to 1258
> GH08991.pep MDNSALMPQASGRHMPPEELAMQALTKQLYKSRLFRGYYMERCLVEQVSG YRDVVVLQRSERELEKLLHSSAGQLQKFYQRFVPNMWVGITYGSYGSYQH KADPGQLETCIWTEMNDLAFGEYWFSIKTLRFRDHEVQFKLKMIRPVEPE LMATPRRSLILNRSSPVKAITAGGENSSSKPDEVAEQIQLGLNDFLAVLQ QWGDGVKQTVYDFMTNDVNKRNILGTIRFLGLLIFSALGGAALALRFLGV FAVRFLFELSRFTHTATPIVFKLIEFLNKIVGAIFILLTMIWKDIVTRGH PEPKQQQLHLEASSRFKSIQYERSEPNRRSPRW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16467-PA | 329 | GF16467-PA | 1..329 | 1..333 | 1401 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20245-PA | 331 | GG20245-PA | 1..331 | 1..333 | 1622 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13487-PA | 357 | GH13487-PA | 27..351 | 13..333 | 1190 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4287-PB | 333 | CG4287-PB | 1..333 | 1..333 | 1726 | 100 | Plus |
CG4287-PA | 333 | CG4287-PA | 1..333 | 1..333 | 1726 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24636-PA | 340 | GI24636-PA | 16..334 | 10..333 | 1153 | 68 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21722-PA | 327 | GL21722-PA | 2..325 | 3..328 | 1147 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18083-PA | 328 | GA18083-PA | 1..326 | 1..328 | 1155 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25741-PA | 333 | GM25741-PA | 1..333 | 1..333 | 1689 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20315-PA | 333 | GD20315-PA | 1..333 | 1..333 | 1703 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23458-PA | 349 | GJ23458-PA | 12..343 | 3..333 | 1187 | 66.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11223-PA | 242 | GK11223-PA | 1..242 | 1..244 | 620 | 49.2 | Plus |
Dwil\GK24916-PA | 108 | GK24916-PA | 1..91 | 214..303 | 312 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26344-PA | 332 | GE26344-PA | 1..332 | 1..333 | 1613 | 90.7 | Plus |
Translation from 257 to 1258
> GH08991.hyp MDNSALMPQASGRHMPPEELAMQALTKQLYKSRLFRGYYMERCLVEQVSG YRDVVVLQRSERELEKLLHSSAGQLQKFYQRFVPNMWVGITYGSYGSYQH KADPGQLETCIWTEMNDLAFGEYWFSIKTLRFRDHEVQFKLKMIRPVEPE LMATPRRSLILNRSSPVKAITAGGENSSSKPDEVAEQIQLGLNDFLAVLQ QWGDGVKQTVYDFMTNDVNKRNILGTIRFLGLLIFSALGGAALALRFLGV FAVRFLFELSRFTHTATPIVFKLIEFLNKIVGAIFILLTMIWKDIVTRGH PEPKQQQLHLEASSRFKSIQYERSEPNRRSPRW*