BDGP Sequence Production Resources |
Search the DGRC for GH09022
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 90 |
Well: | 22 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4409-RB |
Protein status: | GH09022.pep: gold |
Sequenced Size: | 932 |
Gene | Date | Evidence |
---|---|---|
CG4409 | 2008-04-29 | Release 5.5 accounting |
CG4409 | 2008-04-29 | Picked prior to 5.5 |
CG4409 | 2008-08-15 | Release 5.9 accounting |
CG4409 | 2008-12-18 | 5.12 accounting |
932 bp assembled on 2007-09-25
GenBank Submission: BT030816
> GH09022.complete CTCACATCGCCAGTATGAATCGCGGCCAGCTTTTAGTTTTGTGCATTTTT GCCACTGGAATTTCCCTTTCGATGGGTTTTCCCCAGGACGATCTAATTAA GCCGGGTAGTGACGAATCGGATGTGAGTGGCATTGGCTTCGTGACGCTCG ACGGAACGGCCAGCGAAGAGAGTGACGAAAGCGACCAAGGCAACGCGTCC GATGATTTGATATTTTTGAGTCGCCAAAAGCCAAGTCCGGTCAACAATTC CGTCGATTTGAGCGCCTTTGTGGCACTGATTCCTCTGCAAGAAGTCCAGT CCATTGCTGCTCACTATTATCATCATGATGCGGAGTTTCAAAGGTCGTAC GCCTTTCTCGCCAGCAGCGATTTCGCGGACATCAAGCGGAAAATACTTCA GCTGCCGGAAGTGCTGGAGTTCACCAACTATCTGGGTAACAATGGACTAG ATGTCGTCAAGGTGATGCATTCGGTGGCAGGAGTGTTCAAACCGTCCATT CTGAGCTCCGCAGCGGTCAACGAGCCAACAAAAGTCACAACCACCGAAGA TGGCAGCTCCGCCGCTGGAGAAGCACAAACTGGCCTCCATGGAATGGTGG AGAGGGTCCTGGAAATTCTGCCGCAGGACCAACTGTACGCCCTATTCTTC GACGAGTTTGAGAGCAACAAACAGTTCGCAGCATTTGTCGACAGCATTAG CAGTCCAAAGTTTGCCAAGATTTTGAGCGGTTTGCAGAACTCAATGCCGT TGCGAAATCTACTATTTGTCCTGCACAATAACAGTATCTATGTGGAGCGG ATTGTGGAGTCCGTAAAATCGTATCTATCCATTTCCAGTTTTTAGTTTGC CTAAGTCTTAGGGGCTTGTTTTAAGCTCGCTGTGGCAAATAAACTGTATG AATTAGACAAACTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4409-RB | 1188 | CG4409-RB | 149..1063 | 1..915 | 4575 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12330519..12331040 | 1..522 | 2580 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 12331190..12331405 | 522..737 | 1065 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 12331949..12332128 | 735..914 | 900 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16443236..16443757 | 1..522 | 2610 | 100 | Plus |
2R | 25286936 | 2R | 16443907..16444122 | 522..737 | 1080 | 100 | Plus |
2R | 25286936 | 2R | 16444666..16444846 | 735..915 | 905 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16444435..16444956 | 1..522 | 2610 | 100 | Plus |
2R | 25260384 | 2R | 16445106..16445321 | 522..737 | 1080 | 100 | Plus |
2R | 25260384 | 2R | 16445865..16446045 | 735..915 | 905 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12330519..12331040 | 1..522 | 99 | -> | Plus |
chr2R | 12331191..12331405 | 523..737 | 99 | -> | Plus |
chr2R | 12331952..12332128 | 738..914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4409-RB | 1..831 | 15..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4409-RB | 1..831 | 15..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4409-RB | 1..831 | 15..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4409-RB | 1..831 | 15..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4409-RB | 1..831 | 15..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4409-RB | 1..914 | 1..914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4409-RB | 1..914 | 1..914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4409-RB | 26..939 | 1..914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4409-RB | 1..914 | 1..914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4409-RB | 26..939 | 1..914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16443236..16443757 | 1..522 | 100 | -> | Plus |
2R | 16443908..16444122 | 523..737 | 100 | -> | Plus |
2R | 16444669..16444845 | 738..914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16443236..16443757 | 1..522 | 100 | -> | Plus |
2R | 16443908..16444122 | 523..737 | 100 | -> | Plus |
2R | 16444669..16444845 | 738..914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16443236..16443757 | 1..522 | 100 | -> | Plus |
2R | 16443908..16444122 | 523..737 | 100 | -> | Plus |
2R | 16444669..16444845 | 738..914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12330741..12331262 | 1..522 | 100 | -> | Plus |
arm_2R | 12331413..12331627 | 523..737 | 100 | -> | Plus |
arm_2R | 12332174..12332350 | 738..914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16445107..16445321 | 523..737 | 100 | -> | Plus |
2R | 16445868..16446044 | 738..914 | 100 | Plus | |
2R | 16444435..16444956 | 1..522 | 100 | -> | Plus |
Translation from 2 to 844
> GH09022.pep HIASMNRGQLLVLCIFATGISLSMGFPQDDLIKPGSDESDVSGIGFVTLD GTASEESDESDQGNASDDLIFLSRQKPSPVNNSVDLSAFVALIPLQEVQS IAAHYYHHDAEFQRSYAFLASSDFADIKRKILQLPEVLEFTNYLGNNGLD VVKVMHSVAGVFKPSILSSAAVNEPTKVTTTEDGSSAAGEAQTGLHGMVE RVLEILPQDQLYALFFDEFESNKQFAAFVDSISSPKFAKILSGLQNSMPL RNLLFVLHNNSIYVERIVESVKSYLSISSF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13599-PA | 299 | GF13599-PA | 3..249 | 29..248 | 614 | 56.3 | Plus |
Dana\GF11262-PA | 211 | GF11262-PA | 26..200 | 85..271 | 157 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20605-PA | 190 | GG20605-PA | 1..176 | 5..180 | 820 | 88.6 | Plus |
Dere\GG22265-PA | 214 | GG22265-PA | 29..203 | 85..271 | 150 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21237-PA | 658 | GH21237-PA | 140..306 | 77..244 | 322 | 37.5 | Plus |
Dgri\GH20644-PA | 209 | GH20644-PA | 27..201 | 85..271 | 153 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4409-PB | 276 | CG4409-PB | 1..276 | 5..280 | 1379 | 100 | Plus |
CG15712-PA | 214 | CG15712-PA | 29..208 | 85..276 | 151 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20524-PA | 313 | GI20524-PA | 64..281 | 64..272 | 254 | 33.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10739-PA | 250 | GL10739-PA | 3..246 | 29..245 | 557 | 51.4 | Plus |
Dper\GL11341-PA | 215 | GL11341-PA | 22..202 | 77..269 | 158 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24464-PA | 317 | GA24464-PA | 18..317 | 11..280 | 720 | 53.1 | Plus |
Dpse\GA13908-PA | 215 | GA13908-PA | 30..202 | 85..269 | 157 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21697-PA | 292 | GM21697-PA | 1..244 | 5..248 | 1199 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11193-PA | 292 | GD11193-PA | 1..244 | 5..248 | 1198 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22374-PA | 320 | GJ22374-PA | 75..320 | 64..280 | 570 | 48 | Plus |
Dvir\GJ19973-PA | 212 | GJ19973-PA | 27..199 | 85..269 | 163 | 25.7 | Plus |
Translation from 2 to 844
> GH09022.hyp HIASMNRGQLLVLCIFATGISLSMGFPQDDLIKPGSDESDVSGIGFVTLD GTASEESDESDQGNASDDLIFLSRQKPSPVNNSVDLSAFVALIPLQEVQS IAAHYYHHDAEFQRSYAFLASSDFADIKRKILQLPEVLEFTNYLGNNGLD VVKVMHSVAGVFKPSILSSAAVNEPTKVTTTEDGSSAAGEAQTGLHGMVE RVLEILPQDQLYALFFDEFESNKQFAAFVDSISSPKFAKILSGLQNSMPL RNLLFVLHNNSIYVERIVESVKSYLSISSF*