BDGP Sequence Production Resources |
Search the DGRC for GH09028
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 90 |
Well: | 28 |
Vector: | pOT2 |
Associated Gene/Transcript | Vap-33B-RC |
Protein status: | GH09028.pep: gold |
Sequenced Size: | 1665 |
Gene | Date | Evidence |
---|---|---|
CG33523 | 2002-11-11 | Blastp of sequenced clone |
CG33523 | 2008-04-29 | Release 5.5 accounting |
CG33523 | 2008-08-15 | Release 5.9 accounting |
CG33523 | 2008-12-18 | 5.12 accounting |
1665 bp (1665 high quality bases) assembled on 2002-11-11
GenBank Submission: BT001406
> GH09028.complete ACAAGAGCCCAAAAGTCCGGCTTTGTCTATATGTCTTAGATCTTGAGTCT GATTAAGGATATAAATTGTGTGTGGAGACTGGCGAATGTGACCAATGTCG GAGGCAGGGCGTTTTAGTTACGTCACCTTTGTCGATTCCGCTCCCATGGT GCTCAAGGAGACCAACATCAACAAGATGCACACTCCATCCGAGGGCATGT TGCACATCAATCCCAAGGATTTTGTCAACTTCAATTCCAAGAATGCGGAA GCCACGATGACCATCAAGTCTATTGCCACCTCGGCAGTGACGTACAAGAT CCAAACCACATCGCCGGAGAAGTTCCGTGTGCGACCACGTTGCGGCATCA TCCAGCCCAATCAGGAGGCCACCATCAACATATGGTTGAAGTCGGAGCAC AAGCTTAGTGACGACAGCAAGGATAAGTTCCTGGTGATGGCTATGGTCGC GCCAGGCGGTGAATGCGGTGGCGCCGATGTGACCGAGCTGTGGCGGAGCA AATCCCCCACATCTGCGGATGTGGAGCAGCATCGACTGGTCTGCCGCTTC GATGAGAACAAATCAAAAGCGCAGCTAGATTGCGCAAGCAAGTCCAGTAA GGCCAGCGTGGATTGCAGCAAGAAGTCCGGTGCTGGCGTAGATCCAGCTA CGGCAATGGAGCGTCAGTTGGCATTCACCCAGAACCTGCAATACGTGACG CTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGGCTTTCTGATGTACCA GCAGCTCGGCCAGCACGCCGCTACCTGTCCCAAGGCAACGGCGTATTCGT GCGCTAAGCGCAAATAATATTTACTTAGCCCGTGCAATTTGACCAGGCAG GAGCTAGACATTGCCGCTCGCGATAGCCACAACAATAACGAAGACGACTG CGACTGTCCAGAGCTGGAGAACTGTGCCTGTGCTGTTGATTTGATGAATC TAGGTCTGGACTGTGCCGATACGATGGACCAATACGATGGCGAATGCCTC GAGGCACTGATACAGGCGCAGGGCACTGGTGATTGGCAGCTGGGCGGCGT TGCTGCCGGCGGCCATTTGCTGGGATTCATCGCATTCGCAAGGAAGATGG TGCGCGTCGTTCTTTCGCTATCGCTGCTGTGCGGCATCTTGTTCGTGAGC TTCTACCTGGGAAGCAACTACGGCGGAAACTCCACCACCACTACCATAAC CACCTCCCTAGCCACAGTCGACTCAGGCAGAGGCAATCGTCAGCCGTGTT ACTACTCGTAGTGAAGCCAAAACCCTCAACTGTGCATGCCAGGGTGGTTC GATTTGTTCAGCAGTAAATGCAACTTGTTCACCTCTGTACACGTAATAAT CCATTTTGACCCTTGCCAGGTATGAAAACTACAAATATTAAAGCCTTCTT ACATACTTCAATGGCTTGCATTCATGAATTCCCGGGTCCTGCGAATTGTT TAGACACCTTTGCTTTTAAAGGTAATTTTAAGATGTTTCCCTTCATTGCA AATCGAACCACCCTCCAAGCAAATACATATTTTTGTATAAATCTTAAGAC CTACCATAAGAGTAACAATTTCGTGTTTCCTGATATTATTGAGTAAATGA TGTCTCGCGCTTACGAGACAATCTCCCAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33523-RC | 1986 | CG33523-RC | 72..1091 | 1..1020 | 5100 | 100 | Plus |
CG33523.g | 2671 | CG33523.g | 1003..1901 | 122..1020 | 4495 | 100 | Plus |
CG33523-RA | 2150 | CG33523-RA | 357..1255 | 122..1020 | 4495 | 100 | Plus |
CG33523-RC | 1986 | CG33523-RC | 1114..1724 | 1019..1629 | 3055 | 100 | Plus |
CG33523.g | 2671 | CG33523.g | 1924..2534 | 1019..1629 | 3055 | 100 | Plus |
CG33523-RA | 2150 | CG33523-RA | 1278..1888 | 1019..1629 | 3055 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 5922108..5922716 | 1019..1627 | 2955 | 99 | Plus |
chr3L | 24539361 | chr3L | 5921700..5922085 | 635..1020 | 1885 | 99.2 | Plus |
chr3L | 24539361 | chr3L | 5921298..5921636 | 297..635 | 1680 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 5920383..5920505 | 1..123 | 615 | 100 | Plus |
chr3L | 24539361 | chr3L | 5921132..5921236 | 194..298 | 525 | 100 | Plus |
chr3L | 24539361 | chr3L | 5920820..5920893 | 122..195 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 5929512..5930122 | 1019..1629 | 3055 | 100 | Plus |
3L | 28110227 | 3L | 5929104..5929489 | 635..1020 | 1930 | 100 | Plus |
3L | 28110227 | 3L | 5928702..5929040 | 297..635 | 1695 | 100 | Plus |
3L | 28110227 | 3L | 5927787..5927909 | 1..123 | 615 | 100 | Plus |
3L | 28110227 | 3L | 5928536..5928640 | 194..298 | 525 | 100 | Plus |
3L | 28110227 | 3L | 5928224..5928297 | 122..195 | 370 | 100 | Plus |
3R | 32079331 | 3R | 8032017..8032061 | 18..62 | 195 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 5922612..5923222 | 1019..1629 | 3055 | 100 | Plus |
3L | 28103327 | 3L | 5922204..5922589 | 635..1020 | 1930 | 100 | Plus |
3L | 28103327 | 3L | 5921802..5922140 | 297..635 | 1695 | 100 | Plus |
3L | 28103327 | 3L | 5920887..5921009 | 1..123 | 615 | 100 | Plus |
3L | 28103327 | 3L | 5921636..5921740 | 194..298 | 525 | 100 | Plus |
3L | 28103327 | 3L | 5921324..5921397 | 122..195 | 370 | 100 | Plus |
3R | 31820162 | 3R | 7772848..7772892 | 18..62 | 195 | 95.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 5920383..5920503 | 1..121 | 100 | -> | Plus |
chr3L | 5920820..5920892 | 122..194 | 100 | -> | Plus |
chr3L | 5921133..5921236 | 195..298 | 100 | -> | Plus |
chr3L | 5921300..5921635 | 299..634 | 99 | -> | Plus |
chr3L | 5921700..5922716 | 635..1627 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RC | 1..723 | 95..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RC | 1..723 | 95..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RF | 802..1707 | 122..1026 | 99 | <- | Plus |
CG33523-RF | 1731..1965 | 1027..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RC | 1..723 | 95..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vap-33B-RF | 802..1707 | 122..1026 | 99 | <- | Plus |
Vap-33B-RF | 1731..1965 | 1027..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RC | 6..1032 | 1..1026 | 99 | <- | Plus |
CG33523-RC | 1056..1656 | 1027..1627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RC | 6..1032 | 1..1026 | 99 | <- | Plus |
CG33523-RC | 1056..1656 | 1027..1627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RC | 6..1032 | 1..1026 | 99 | <- | Plus |
CG33523-RC | 1056..1656 | 1027..1627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RC | 6..1032 | 1..1026 | 99 | <- | Plus |
CG33523-RC | 1056..1656 | 1027..1627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vap-33B-RC | 6..1032 | 1..1026 | 99 | <- | Plus |
Vap-33B-RC | 1056..1656 | 1027..1627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5928704..5929039 | 299..634 | 100 | -> | Plus |
3L | 5927787..5927907 | 1..121 | 100 | -> | Plus |
3L | 5928224..5928296 | 122..194 | 100 | -> | Plus |
3L | 5928537..5928640 | 195..298 | 100 | -> | Plus |
3L | 5929104..5930120 | 635..1627 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5928704..5929039 | 299..634 | 100 | -> | Plus |
3L | 5927787..5927907 | 1..121 | 100 | -> | Plus |
3L | 5928224..5928296 | 122..194 | 100 | -> | Plus |
3L | 5928537..5928640 | 195..298 | 100 | -> | Plus |
3L | 5929104..5930120 | 635..1627 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5928704..5929039 | 299..634 | 100 | -> | Plus |
3L | 5927787..5927907 | 1..121 | 100 | -> | Plus |
3L | 5928224..5928296 | 122..194 | 100 | -> | Plus |
3L | 5928537..5928640 | 195..298 | 100 | -> | Plus |
3L | 5929104..5930120 | 635..1627 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 5920887..5921007 | 1..121 | 100 | -> | Plus |
arm_3L | 5921324..5921396 | 122..194 | 100 | -> | Plus |
arm_3L | 5921637..5921740 | 195..298 | 100 | -> | Plus |
arm_3L | 5921804..5922139 | 299..634 | 100 | -> | Plus |
arm_3L | 5922204..5923220 | 635..1627 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5921804..5922139 | 299..634 | 100 | -> | Plus |
3L | 5922204..5923220 | 635..1627 | 97 | Plus | |
3L | 5920887..5921007 | 1..121 | 100 | -> | Plus |
3L | 5921324..5921396 | 122..194 | 100 | -> | Plus |
3L | 5921637..5921740 | 195..298 | 100 | -> | Plus |
Translation from 94 to 816
> GH09028.pep MSEAGRFSYVTFVDSAPMVLKETNINKMHTPSEGMLHINPKDFVNFNSKN AEATMTIKSIATSAVTYKIQTTSPEKFRVRPRCGIIQPNQEATINIWLKS EHKLSDDSKDKFLVMAMVAPGGECGGADVTELWRSKSPTSADVEQHRLVC RFDENKSKAQLDCASKSSKASVDCSKKSGAGVDPATAMERQLAFTQNLQY VTLALLFLLFAGFGFLMYQQLGQHAATCPKATAYSCAKRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24005-PA | 662 | GF24005-PA | 269..503 | 10..234 | 803 | 69.4 | Plus |
Dana\GF23828-PA | 176 | GF23828-PA | 26..142 | 35..151 | 184 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15302-PA | 497 | GG15302-PA | 268..497 | 10..240 | 1039 | 90 | Plus |
Dere\GG13971-PA | 166 | GG13971-PA | 8..122 | 36..150 | 194 | 32.2 | Plus |
Dere\GG14468-PA | 232 | GG14468-PA | 1..172 | 28..197 | 147 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14689-PA | 482 | GH14689-PA | 260..482 | 14..240 | 503 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33523-PC | 240 | CG33523-PC | 1..240 | 1..240 | 1243 | 100 | Plus |
CG33523-PA | 234 | CG33523-PA | 4..234 | 10..240 | 1197 | 100 | Plus |
CG33523-PD | 498 | CG33523-PD | 268..498 | 10..240 | 1197 | 100 | Plus |
CG33523-PF | 654 | CG33523-PF | 268..498 | 10..240 | 1197 | 100 | Plus |
CG33523-PB | 206 | CG33523-PB | 1..206 | 35..240 | 1068 | 100 | Plus |
CG6527-PB | 166 | CG6527-PB | 8..141 | 36..169 | 186 | 28.4 | Plus |
CG6527-PA | 166 | CG6527-PA | 8..141 | 36..169 | 186 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13304-PA | 504 | GI13304-PA | 266..504 | 3..240 | 502 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21079-PA | 498 | GL21079-PA | 270..497 | 10..240 | 605 | 54.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28323-PA | 498 | GA28323-PA | 270..497 | 10..240 | 599 | 54.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14735-PA | 497 | GM14735-PA | 267..497 | 10..240 | 1224 | 97.8 | Plus |
Dsec\GM24808-PA | 162 | GM24808-PA | 8..141 | 36..169 | 192 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13915-PA | 240 | GD13915-PA | 1..240 | 1..240 | 1267 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12072-PA | 487 | GJ12072-PA | 273..487 | 10..240 | 432 | 44.3 | Plus |
Translation from 94 to 816
> GH09028.hyp MSEAGRFSYVTFVDSAPMVLKETNINKMHTPSEGMLHINPKDFVNFNSKN AEATMTIKSIATSAVTYKIQTTSPEKFRVRPRCGIIQPNQEATINIWLKS EHKLSDDSKDKFLVMAMVAPGGECGGADVTELWRSKSPTSADVEQHRLVC RFDENKSKAQLDCASKSSKASVDCSKKSGAGVDPATAMERQLAFTQNLQY VTLALLFLLFAGFGFLMYQQLGQHAATCPKATAYSCAKRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vap-33B-PC | 240 | CG33523-PC | 1..240 | 1..240 | 1243 | 100 | Plus |
Vap-33B-PA | 234 | CG33523-PA | 4..234 | 10..240 | 1197 | 100 | Plus |
Vap-33B-PD | 498 | CG33523-PD | 268..498 | 10..240 | 1197 | 100 | Plus |
Vap-33B-PF | 654 | CG33523-PF | 268..498 | 10..240 | 1197 | 100 | Plus |
Vap-33B-PB | 206 | CG33523-PB | 1..206 | 35..240 | 1068 | 100 | Plus |