BDGP Sequence Production Resources |
Search the DGRC for GH09040
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 90 |
Well: | 40 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3262-RF |
Protein status: | GH09040.pep: gold |
Preliminary Size: | 1148 |
Sequenced Size: | 920 |
Gene | Date | Evidence |
---|---|---|
CG3262 | 2001-01-01 | Release 2 assignment |
CG3262 | 2001-12-12 | Blastp of sequenced clone |
CG3262 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3262 | 2008-04-29 | Release 5.5 accounting |
CG3262 | 2008-08-15 | Release 5.9 accounting |
CG3262 | 2008-12-18 | 5.12 accounting |
920 bp (920 high quality bases) assembled on 2001-12-12
GenBank Submission: AY070505
> GH09040.complete ATTGATCAACACGATATGGCGCTCCTACGCAACAAAATTAACTGGGTCCC AGGTGAAGTTAATGGCGCGGGGATTGCCTAAAAAGCAACCGATTATTGGA GTACAAGATATTATAGTCGTTGCCTCTGGAAAGGGTGGTGTTGGAAAAAG CACCGTGGCAGCTTGGCAAAACTAGGAAAGCGAGTAGGATTGCTGGACGG GGATATCTTCGGGCCTACTATTCCACTTCTCATGAATGTCCATGGTGAGC CGGTTGTGAACGATAAGAATTTGATGATCCCGCCGCAAAACTACAATGTA AAGTGCTTGTCTATGGGCATGCTGACACCTGTAGAGACCTCTGTTATCTG GCGAGGTCCTCTTGTAATGTCAGCAATACAACGACTGCTAAAAGGTACTG ATTGGGGGCTTCTAGATGTCCTAGTTATAGATACTCCACCGGGCACTGGA GATGTACATCTCTCACTATCCCAGCATGCACCTATCACAGGGGTTATCCT GGTAACAACACCTCATACTGCAGCTGTTCAGGTGACCTTGAAAGGTGCAA GCATGTACGAAAAGTTAAATGTTCCTATCTTTGGCGTAGTAGAGAACATG AAGTACACCATTTGTCAGAACTGTAATCAACGATTGGAGTTTTTTAAAGA CAGCCGTATAAGTTCTCTACCGCGCAAGCTAATTTCTCTTCCGTTAGACT CACGAATAGCGGATAGCAACGAGAGTGGAGTGCCTGTTGTAATAAAATAT CCGGACAGCAAGTACTCTTATCTATTTACCCAATTGGCTGAGGAGATTAC ACAAATACTTAACGAACAAAGATGTAATCAAAATCAAAATAACAGTGCAC ATTAAAAAAAATTTGTGTATATCAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
transib3 | 2883 | transib3 TRANSIB3 2883bp | 1498..1536 | 421..383 | 114 | 76.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 22238474..22238634 | 1..161 | 100 | -> | Plus |
chr2L | 22238701..22239412 | 162..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RD | 12..165 | 1..154 | 100 | -> | Plus |
CG3262-RD | 178..882 | 155..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RD | 12..165 | 1..154 | 100 | -> | Plus |
CG3262-RD | 178..882 | 155..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RD | 12..165 | 1..154 | 100 | -> | Plus |
CG3262-RD | 178..882 | 155..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RD | 12..165 | 1..154 | 100 | -> | Plus |
CG3262-RD | 178..882 | 155..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RD | 12..165 | 1..154 | 100 | -> | Plus |
CG3262-RD | 178..882 | 155..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RC | 38..910 | 1..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RC | 38..910 | 1..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RF | 28..900 | 1..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RC | 38..910 | 1..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RF | 28..900 | 1..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22239943..22240103 | 1..161 | 100 | -> | Plus |
2L | 22240170..22240881 | 162..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22239943..22240103 | 1..161 | 100 | -> | Plus |
2L | 22240170..22240881 | 162..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22239943..22240103 | 1..161 | 100 | -> | Plus |
2L | 22240170..22240881 | 162..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 22239943..22240103 | 1..161 | 100 | -> | Plus |
arm_2L | 22240170..22240881 | 162..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22240170..22240881 | 162..873 | 100 | Plus | |
2L | 22239943..22240103 | 1..161 | 100 | -> | Plus |
Translation from 231 to 854
> GH09040.pep MNVHGEPVVNDKNLMIPPQNYNVKCLSMGMLTPVETSVIWRGPLVMSAIQ RLLKGTDWGLLDVLVIDTPPGTGDVHLSLSQHAPITGVILVTTPHTAAVQ VTLKGASMYEKLNVPIFGVVENMKYTICQNCNQRLEFFKDSRISSLPRKL ISLPLDSRIADSNESGVPVVIKYPDSKYSYLFTQLAEEITQILNEQRCNQ NQNNSAH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22737-PA | 310 | GF22737-PA | 63..193 | 1..131 | 591 | 77.1 | Plus |
Dana\GF10354-PA | 261 | GF10354-PA | 75..257 | 19..192 | 221 | 29.9 | Plus |
Dana\GF20875-PA | 310 | GF20875-PA | 126..284 | 22..166 | 208 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21464-PA | 294 | GG21464-PA | 87..292 | 1..206 | 984 | 88.3 | Plus |
Dere\GG16127-PA | 260 | GG16127-PA | 75..257 | 19..192 | 227 | 31.7 | Plus |
Dere\GG22765-PA | 311 | GG22765-PA | 127..285 | 22..166 | 204 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13628-PA | 292 | GH13628-PA | 86..290 | 1..202 | 758 | 69.3 | Plus |
Dgri\GH14587-PA | 264 | GH14587-PA | 75..254 | 19..189 | 219 | 29.4 | Plus |
Dgri\GH11560-PA | 311 | GH11560-PA | 127..286 | 22..166 | 195 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3262-PF | 207 | CG3262-PF | 1..207 | 1..207 | 1077 | 100 | Plus |
CG3262-PE | 293 | CG3262-PE | 87..293 | 1..207 | 1077 | 100 | Plus |
CG3262-PD | 293 | CG3262-PD | 87..293 | 1..207 | 1077 | 100 | Plus |
CG17904-PA | 311 | CG17904-PA | 127..285 | 22..166 | 229 | 35.8 | Plus |
CG4858-PA | 260 | CG4858-PA | 75..258 | 19..193 | 224 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11769-PA | 297 | GI11769-PA | 86..291 | 1..206 | 746 | 67.9 | Plus |
Dmoj\GI13405-PA | 264 | GI13405-PA | 95..254 | 38..189 | 207 | 30.4 | Plus |
Dmoj\GI17051-PA | 310 | GI17051-PA | 127..285 | 22..166 | 184 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21144-PA | 299 | GL21144-PA | 93..296 | 1..203 | 804 | 71.1 | Plus |
Dper\GL12799-PA | 255 | GL12799-PA | 82..254 | 26..192 | 198 | 30.1 | Plus |
Dper\GL18780-PA | 311 | GL18780-PA | 127..285 | 22..166 | 197 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17025-PA | 299 | GA17025-PA | 93..296 | 1..203 | 801 | 71.1 | Plus |
Dpse\GA18483-PA | 258 | GA18483-PA | 82..257 | 26..192 | 222 | 31.1 | Plus |
Dpse\GA14715-PA | 311 | GA14715-PA | 127..285 | 22..166 | 194 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18803-PA | 293 | GM18803-PA | 87..293 | 1..207 | 1060 | 96.1 | Plus |
Dsec\GM22307-PA | 260 | GM22307-PA | 75..258 | 19..193 | 224 | 31.5 | Plus |
Dsec\GM17199-PA | 311 | GM17199-PA | 127..285 | 22..166 | 197 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21613-PA | 293 | GD21613-PA | 87..293 | 1..207 | 1059 | 96.1 | Plus |
Dsim\GD14899-PA | 260 | GD14899-PA | 82..258 | 26..193 | 223 | 32.8 | Plus |
Dsim\GD24076-PA | 311 | GD24076-PA | 127..285 | 22..166 | 191 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13135-PA | 298 | GJ13135-PA | 86..294 | 1..205 | 764 | 67.9 | Plus |
Dvir\GJ11530-PA | 266 | GJ11530-PA | 95..254 | 38..189 | 224 | 31.2 | Plus |
Dvir\GJ17301-PA | 310 | GJ17301-PA | 127..285 | 22..166 | 191 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23989-PA | 303 | GK23989-PA | 94..300 | 1..207 | 800 | 70.7 | Plus |
Dwil\GK12055-PA | 261 | GK12055-PA | 75..254 | 19..189 | 218 | 29.3 | Plus |
Dwil\GK24826-PA | 310 | GK24826-PA | 126..284 | 22..166 | 195 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12953-PA | 293 | GE12953-PA | 87..293 | 1..207 | 985 | 88.9 | Plus |
Dyak\GE19695-PA | 260 | GE19695-PA | 75..258 | 19..193 | 228 | 31.5 | Plus |
Dyak\GE23241-PA | 260 | GE23241-PA | 75..258 | 19..193 | 228 | 31.5 | Plus |
Dyak\GE12759-PA | 311 | GE12759-PA | 127..285 | 22..166 | 195 | 35.8 | Plus |
Translation from 231 to 854
> GH09040.hyp MNVHGEPVVNDKNLMIPPQNYNVKCLSMGMLTPVETSVIWRGPLVMSAIQ RLLKGTDWGLLDVLVIDTPPGTGDVHLSLSQHAPITGVILVTTPHTAAVQ VTLKGASMYEKLNVPIFGVVENMKYTICQNCNQRLEFFKDSRISSLPRKL ISLPLDSRIADSNESGVPVVIKYPDSKYSYLFTQLAEEITQILNEQRCNQ NQNNSAH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3262-PF | 207 | CG3262-PF | 1..207 | 1..207 | 1077 | 100 | Plus |
CG3262-PE | 293 | CG3262-PE | 87..293 | 1..207 | 1077 | 100 | Plus |
CG3262-PD | 293 | CG3262-PD | 87..293 | 1..207 | 1077 | 100 | Plus |
CG17904-PA | 311 | CG17904-PA | 127..285 | 22..166 | 229 | 35.8 | Plus |
CG4858-PA | 260 | CG4858-PA | 75..258 | 19..193 | 224 | 31 | Plus |