![]() | BDGP Sequence Production Resources |
Search the DGRC for GH09088
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 90 |
Well: | 88 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6304-RA |
Protein status: | GH09088.pep: gold |
Preliminary Size: | 1506 |
Sequenced Size: | 1422 |
Gene | Date | Evidence |
---|---|---|
CG6304 | 2001-01-01 | Release 2 assignment |
CG6304 | 2001-07-04 | Blastp of sequenced clone |
CG6304 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6304 | 2008-04-29 | Release 5.5 accounting |
CG6304 | 2008-08-15 | Release 5.9 accounting |
CG6304 | 2008-12-18 | 5.12 accounting |
1422 bp (1422 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047579
> GH09088.complete CATAAATATACAGGTACTGGTCTGAAACATTTATTACAAAAAATTCAAAA AACAAAAATATAGCGAAGAAGGATAAAGACCATGTACAACAATATTAAGG GCCTACACATAAATGAATACCAGAGGGAGAATGGAGATAATACCAGAAAG CTGGCGTGTGAAGGTACAGTGAAGCTAAACGCCAATGCCCAAGAATTTGT GCCACGTTACAAGAGGGAACAACCAGCAAAAGATGATGCTATAGTTGGTA ACAGTAACATGAGCAACACCAATAACGACGACCAAAAACCAAAATCTAAC CTTATGTTGCCGTGGAAAGGATTTCCGAATAAATCTCAAAAACCTTCTCG CAATGTGGACTACATAGTTCTACCGAGCACCAAAAGATTTAAAAAGCCCA TTGGCCAACAACTCGTGGAAAATGTTTCCACTACGCCCTCAAAAGTCCAT TTAAATGATCCTGTTCCAGCTGGAAATCGCATTGATCACGAGGAAAGGCG CCGCGAACACGATAGAAAAATCGCTGTGGAAGCCTTAAAGTTGGCCGAAC AGCGTAGAATGAGGGATCCTGTCATTGCCCCCACGGAGGGCAATGAAAAC TCAAAGAACGTGCCGCCAATTATAAATATCTCACGATCTCCAATAAAGTT CACGCCAAATGAAAGGATCAGAGTGGACCGTTTAAGGGCAGCGAAGAGAG AGCGTATCGAGCGTATCCTTCGCGAAATGACAAACAGCAAGCAGTCGCAA GTGAAGAAAGAGCAGCTCAAGGAGGAGAAGATTTGTTTTGATAATGCACC CAATGAATCTAATAAGCCTAATGAACCTGCTAAACCTATGCCTCAGCATC CGGAGAAGACAAATGAAGTGCCCATAGTTACCAAAAAGAGGTACATACCA ACCACCAAGGAATGGGACGAGCGATGTCGTGCCAAACATTTGGCTAAGAT GGAAGCTGAAAAGAAAAATCAGATGGGTGTTCAGGATGCGAACCCTTCGC AATCTGCTGTGCCACCAAAACCATTGGTGACCTCCAATGTGGTGAACATA TCTCCGTCGGGAGTTATTCGTCTGTGCGATCGCTTTAGTCCACCTGCTAA ACAATGCGATACGGAGAAGCGCAGGGGAAATCTCACACACTTCCGACCCC TTCAAAACTGGACAATCCGTCGAAATCCGCCGGTACCATTGAACAACCTG TGCAATAAAAATGGAAAGATCGTGCAGCGCTATAGCATCGACCAACTGCT GGTTTTGGAGCCTCAACCTGAAGAACTGAAAGTGCCTCAATTGGATAAGG CCCTGTTAGGCTTGGGATTTCTGTACGATTCATTTGAGGGCTCTCCATAA ATGTATTCGAATTTAATCTGAACTTATTGATTAAAAAACATTTTATCATT TTCCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6304-RA | 1536 | CG6304-RA | 67..1472 | 1..1406 | 7030 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 906..1035 | 23..151 | 125 | 56.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 17010176..17011236 | 344..1404 | 100 | <- | Minus |
chr2L | 17011298..17011640 | 1..343 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6304-RA | 1..1269 | 82..1350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6304-RA | 1..1269 | 82..1350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6304-RA | 1..1269 | 82..1350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6304-RA | 1..1269 | 82..1350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6304-RA | 39..1442 | 1..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6304-RA | 39..1442 | 1..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6304-RA | 39..1442 | 1..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6304-RA | 39..1442 | 1..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6304-RA | 119..1522 | 1..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17011552..17012612 | 344..1404 | 100 | <- | Minus |
2L | 17012674..17013016 | 1..343 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17011552..17012612 | 344..1404 | 100 | <- | Minus |
2L | 17012674..17013016 | 1..343 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17011552..17012612 | 344..1404 | 100 | <- | Minus |
2L | 17012674..17013016 | 1..343 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 17011552..17012612 | 344..1404 | 100 | <- | Minus |
arm_2L | 17012674..17013016 | 1..343 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17011552..17012612 | 344..1404 | 100 | <- | Minus |
2L | 17012674..17013016 | 1..343 | 100 | Minus |
Translation from 81 to 1349
> GH09088.pep MYNNIKGLHINEYQRENGDNTRKLACEGTVKLNANAQEFVPRYKREQPAK DDAIVGNSNMSNTNNDDQKPKSNLMLPWKGFPNKSQKPSRNVDYIVLPST KRFKKPIGQQLVENVSTTPSKVHLNDPVPAGNRIDHEERRREHDRKIAVE ALKLAEQRRMRDPVIAPTEGNENSKNVPPIINISRSPIKFTPNERIRVDR LRAAKRERIERILREMTNSKQSQVKKEQLKEEKICFDNAPNESNKPNEPA KPMPQHPEKTNEVPIVTKKRYIPTTKEWDERCRAKHLAKMEAEKKNQMGV QDANPSQSAVPPKPLVTSNVVNISPSGVIRLCDRFSPPAKQCDTEKRRGN LTHFRPLQNWTIRRNPPVPLNNLCNKNGKIVQRYSIDQLLVLEPQPEELK VPQLDKALLGLGFLYDSFEGSP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15113-PA | 444 | GF15113-PA | 26..444 | 18..416 | 769 | 43 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21759-PA | 448 | GG21759-PA | 1..444 | 1..418 | 1354 | 63.5 | Plus |
Dere\GG18241-PA | 1786 | GG18241-PA | 227..523 | 48..296 | 357 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6304-PB | 422 | CG6304-PB | 1..422 | 1..422 | 2228 | 100 | Plus |
CG6304-PA | 422 | CG6304-PA | 1..422 | 1..422 | 2228 | 100 | Plus |
CG9777-PA | 413 | CG9777-PA | 76..410 | 46..409 | 320 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14283-PA | 532 | GI14283-PA | 70..532 | 31..416 | 338 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16045-PA | 522 | GL16045-PA | 22..521 | 3..415 | 431 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26113-PA | 524 | GA26113-PA | 31..523 | 16..415 | 411 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17143-PA | 431 | GM17143-PA | 1..430 | 1..421 | 1680 | 81.9 | Plus |
Dsec\GM13385-PA | 990 | GM13385-PA | 248..493 | 121..411 | 233 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21884-PA | 322 | GD21884-PA | 1..234 | 1..226 | 942 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16242-PA | 477 | GJ16242-PA | 60..475 | 31..414 | 387 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23795-PA | 435 | GK23795-PA | 48..435 | 31..416 | 472 | 35.7 | Plus |
Translation from 81 to 1349
> GH09088.hyp MYNNIKGLHINEYQRENGDNTRKLACEGTVKLNANAQEFVPRYKREQPAK DDAIVGNSNMSNTNNDDQKPKSNLMLPWKGFPNKSQKPSRNVDYIVLPST KRFKKPIGQQLVENVSTTPSKVHLNDPVPAGNRIDHEERRREHDRKIAVE ALKLAEQRRMRDPVIAPTEGNENSKNVPPIINISRSPIKFTPNERIRVDR LRAAKRERIERILREMTNSKQSQVKKEQLKEEKICFDNAPNESNKPNEPA KPMPQHPEKTNEVPIVTKKRYIPTTKEWDERCRAKHLAKMEAEKKNQMGV QDANPSQSAVPPKPLVTSNVVNISPSGVIRLCDRFSPPAKQCDTEKRRGN LTHFRPLQNWTIRRNPPVPLNNLCNKNGKIVQRYSIDQLLVLEPQPEELK VPQLDKALLGLGFLYDSFEGSP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6304-PB | 422 | CG6304-PB | 1..422 | 1..422 | 2228 | 100 | Plus |
CG6304-PA | 422 | CG6304-PA | 1..422 | 1..422 | 2228 | 100 | Plus |
CG9777-PA | 413 | CG9777-PA | 76..410 | 46..409 | 320 | 30.3 | Plus |