BDGP Sequence Production Resources |
Search the DGRC for GH09123
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 91 |
Well: | 23 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3987-RA |
Protein status: | GH09123.pep: gold |
Preliminary Size: | 1504 |
Sequenced Size: | 1484 |
Gene | Date | Evidence |
---|---|---|
CG3987 | 2001-01-01 | Release 2 assignment |
CG3987 | 2001-11-02 | Blastp of sequenced clone |
CG3987 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3987 | 2008-04-29 | Release 5.5 accounting |
CG3987 | 2008-08-15 | Release 5.9 accounting |
CG3987 | 2008-12-18 | 5.12 accounting |
1484 bp (1484 high quality bases) assembled on 2001-11-02
GenBank Submission: AY069074
> GH09123.complete TTCACACTGCACTTTACGCATAGCCGGTCGTCCCAGAAATTTGAAGAGCC AAACAGTTGATAATGGCACATTCAATGCTGAAACTGGGGATGATGTGTGG AATACTCCACCTGCTGACCTTTGGAGTCATTGCCGAGGATCAGCTGAAAA ACAACACAATAGTGGTACATACTCCTCTCCAGAACTACGATCAACCCAAT CTCCAGGACTACGAGGAATGCCAGGTGAACAGGGACAATTGCATCAATGT TTGCGCTGGCAAACAGTCGTGCGAGGACGAGTGTCCTGTGTGCCCGGACC TGTACGTCAAGCCCCTGATGGTTCAGGGCATTAACGATACGAATATAGTG GCACCACCCCAGGTACCTATTAATACGACCAACATTATTCGGCTGACCAA CGATATCAACAATATAATCGAACATCAAATCCAAAATCGCAATGAGGTCA ATGTCCAGGTGAATCAGAATGTCTCGAAGGTGGGAGGACGTTTTGGACTG GGCTACACTGACAAGGGATCGTGCTGTTATGTGGTGCGTTTGGATCGCGA GTGTAAGAATGAAGATGGACGCGACTGCAGAGAAAGAAGCCGTCAGCGGA TCTGTGGCGAAAAGTGTCAGGCCAGAGTGATGTTGGCCAAAATAGTGGTG CAGTGTGAAGCCGAGGACTCCGACAGGTGTCACGAAACCATCGAATATGT GCCACGGAGGAGGAGAACCCTCCAGCGGAGGACACCCAAGGCTACACGGT GTCATTACACTGGCAACAGTTGGCCCTACTTCAATTGCGGACAGAATCCA GGCCAAAATAGTGATTTTGCCCAGCCGACGAGGCCTAAGACCTCTATCTG CGAGCACTGCCTCAATTATCCCTACGGATACATTCTGCAAAATGGTCTGC CCGCCCAGTGTGCCGGTTGTTTCCAGGGATACGGAGCTCCCCTCATGTAT AATCCTCCTTGGATGTACAATCCATATTATGTGGCATATCCAGCCTTTAA CAATATACCGGCCATACAGAACAATAATAATGGCAACAGCGGTGACACCA GTGTAGATAAAACCATTGCAGATGATGATGACGATGGATGGACTCTATGT GACGACATCGAAAAATGCCTAGACGCGGAATACAAAGGCTCGCAGAACAG CGGGTCACCTGAACATCTGGTCGACGACGACGACTACAACGTTTCAGTTC AGCGAAGGAGACGCCGTCCAAGCCGTCACCACTTTGTGAGATCAGCCTAC AGCAAACGCAATCGCAAGCACAACTGATCAATTCCAGATGAAACCACAAA CTCTTTAGATTTTCTGCAAACCTTTTGCTTCAGAAAGAAATAGTCTAGAA ATATTGTATTTCTGATTAACCAAAACTAAGGTGTCTTCATATAACTACTA CATTTCTCTACATATTTTACTGAATAAAAGTGTTTTTGCTAACCAAATGA ATAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
accord2 | 7650 | accord2 QBERT 7650bp | 4442..4484 | 1043..1001 | 116 | 74.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 10964630..10964706 | 1..77 | 100 | -> | Plus |
chr3R | 10964982..10966360 | 78..1456 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3987-RA | 1..1215 | 63..1277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3987-RA | 1..1215 | 63..1277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3987-RA | 1..1215 | 63..1277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3987-RA | 1..1215 | 63..1277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3987-RA | 1..1215 | 63..1277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3987-RA | 1..1456 | 1..1456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3987-RA | 1..1456 | 1..1456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3987-RA | 28..1483 | 1..1456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3987-RA | 1..1456 | 1..1456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3987-RA | 28..1483 | 1..1456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15139985..15140061 | 1..77 | 100 | -> | Plus |
3R | 15140337..15141715 | 78..1456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15139985..15140061 | 1..77 | 100 | -> | Plus |
3R | 15140337..15141715 | 78..1456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15139985..15140061 | 1..77 | 100 | -> | Plus |
3R | 15140337..15141715 | 78..1456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 10965707..10965783 | 1..77 | 100 | -> | Plus |
arm_3R | 10966059..10967437 | 78..1456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14881168..14882546 | 78..1456 | 100 | Plus | |
3R | 14880816..14880892 | 1..77 | 100 | -> | Plus |
Translation from 62 to 1276
> GH09123.pep MAHSMLKLGMMCGILHLLTFGVIAEDQLKNNTIVVHTPLQNYDQPNLQDY EECQVNRDNCINVCAGKQSCEDECPVCPDLYVKPLMVQGINDTNIVAPPQ VPINTTNIIRLTNDINNIIEHQIQNRNEVNVQVNQNVSKVGGRFGLGYTD KGSCCYVVRLDRECKNEDGRDCRERSRQRICGEKCQARVMLAKIVVQCEA EDSDRCHETIEYVPRRRRTLQRRTPKATRCHYTGNSWPYFNCGQNPGQNS DFAQPTRPKTSICEHCLNYPYGYILQNGLPAQCAGCFQGYGAPLMYNPPW MYNPYYVAYPAFNNIPAIQNNNNGNSGDTSVDKTIADDDDDGWTLCDDIE KCLDAEYKGSQNSGSPEHLVDDDDYNVSVQRRRRRPSRHHFVRSAYSKRN RKHN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17832-PA | 389 | GF17832-PA | 30..388 | 30..403 | 975 | 55.6 | Plus |
Dana\GF17834-PA | 391 | GF17834-PA | 30..390 | 30..403 | 926 | 54.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16890-PA | 406 | GG16890-PA | 1..405 | 1..401 | 1364 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17384-PA | 414 | GH17384-PA | 37..354 | 33..355 | 844 | 53.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3987-PA | 404 | CG3987-PA | 1..404 | 1..404 | 2244 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23928-PA | 406 | GI23928-PA | 29..405 | 31..399 | 778 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22136-PA | 406 | GL22136-PA | 25..406 | 24..400 | 1008 | 59.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17826-PA | 406 | GA17826-PA | 25..406 | 24..400 | 1018 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24199-PA | 412 | GM24199-PA | 1..412 | 1..404 | 1842 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18989-PA | 412 | GD18989-PA | 1..412 | 1..404 | 1848 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24024-PA | 430 | GJ24024-PA | 28..430 | 31..402 | 894 | 47.7 | Plus |
Dvir\GJ24022-PA | 430 | GJ24022-PA | 28..430 | 31..402 | 884 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13299-PA | 394 | GK13299-PA | 2..390 | 14..400 | 971 | 52.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24272-PA | 412 | GE24272-PA | 1..412 | 1..404 | 1477 | 74.6 | Plus |
Translation from 62 to 1276
> GH09123.hyp MAHSMLKLGMMCGILHLLTFGVIAEDQLKNNTIVVHTPLQNYDQPNLQDY EECQVNRDNCINVCAGKQSCEDECPVCPDLYVKPLMVQGINDTNIVAPPQ VPINTTNIIRLTNDINNIIEHQIQNRNEVNVQVNQNVSKVGGRFGLGYTD KGSCCYVVRLDRECKNEDGRDCRERSRQRICGEKCQARVMLAKIVVQCEA EDSDRCHETIEYVPRRRRTLQRRTPKATRCHYTGNSWPYFNCGQNPGQNS DFAQPTRPKTSICEHCLNYPYGYILQNGLPAQCAGCFQGYGAPLMYNPPW MYNPYYVAYPAFNNIPAIQNNNNGNSGDTSVDKTIADDDDDGWTLCDDIE KCLDAEYKGSQNSGSPEHLVDDDDYNVSVQRRRRRPSRHHFVRSAYSKRN RKHN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3987-PA | 404 | CG3987-PA | 1..404 | 1..404 | 2244 | 100 | Plus |