Clone GH09263 Report

Search the DGRC for GH09263

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:92
Well:63
Vector:pOT2
Associated Gene/TranscriptAats-gly-RA
Protein status:GH09263.pep: gold
Preliminary Size:2200
Sequenced Size:2462

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6778 2001-01-01 Release 2 assignment
CG6778 2001-07-04 Blastp of sequenced clone
CG6778 2003-01-01 Sim4 clustering to Release 3
Aats-gly 2008-04-29 Release 5.5 accounting
Aats-gly 2008-08-15 Release 5.9 accounting
Aats-gly 2008-12-18 5.12 accounting

Clone Sequence Records

GH09263.complete Sequence

2462 bp (2462 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051413

> GH09263.complete
TCCAAGTCGAAATTGCAGCCGAAAGTGAAGTTGTTAAAAGCGCTACCCCA
CCTGCGCAGCGCCACCACAGCCGTGAGAACTCAGATTGCAAGAACAACGT
GGAGCGAGCACATTGCCACGAAAGTGTTTTTTAGCACCACTACCACAAAA
CCTACTCCCTCCGCACCACCACCACCTCCACCAACGCAACCGCAGCAGCC
AGCTGCAACCACAAGTTGGGGCACCAAGAAGCAAAATAGAAAGGTAAAAC
TAAGATCCGCCGCTGCCGAGTTCATCATGTCGAATCCCGAGATTGAGGCT
CAACTTGCCCCATTGAGGGAACGAGTTCAGGAGCAGGGTAACCTGGTGAG
GGATCTCAAGGCGAAGGGTGCCCCCGAGATCGATGTGAAAAAGGCAGTAG
CCGAGCTGAAGGCACGCAAGAAGCTGCTGGAGGACAAAGAGCTCGCCCTG
ACCCCCAGTGTCGTTAGTTTCGATCGCGCGAAGATGGAGGATCTACTCAA
GCGTCGCTTCTTCTACGACCAGAGTTTCGCAATTTATGGCGGCATCACCG
GCCAGTACGATTTTGGACCCATGGGCTGTGCCCTCAAGTCCAACATTCTG
GCCCTATGGCGTCAGTATTTCGCCCTCGAAGAGCAAATGCTGGAGGTGGA
CTGCTCTATTCTGACTCCCGAACCTGTGCTCAAAGCCTCTGGTCATGTGG
AGCGTTTCGCTGATCTGATGGTCAAGGATGTCAAGACCGGCGAGTGCTTC
CGCCTGGATCATCTCATTAAGCAGGCTTTGGAAAAGCTATCTAAGGCCAA
GGATGCAACTCCCGCCCTGCAGGCCGAGTGTGAGGATATTATCATTAAAC
TGGATGGCCTGAACAAACAGGAATTGGCTGGTGTCCTGGCCAAATACAAC
ATCAAATCTCCATTAACCGGCAATGATTTAACAGAACCGATTGAGTTCAA
CCTGATGTTTGCCACCCAAATTGGACCCACTGGCTTGGTCAAGGGATTCC
TGCGGCCCGAAACTGCCCAGGGTATCTTCGTCAACTTCAAGCGACTGCTG
GAATTCAATCAAGGCAAGCTTCCCTTCGCTGTGGCTCAAATTGGCAACTC
CTTCCGCAATGAAATCTCACCCCGATCGGGATTGATCCGTGTGCGAGAGT
TCACCATGGCAGAGATTGAACATTTCTGTGATCCCGTGCTCAAGGACCAT
CCCAAATTTGGCAACATCAAATCGGAAAAGTTGACCCTTTACTCGGCGTG
CAACCAGATGGATGGAAAGTCTGCCGCTCAGGTGCAAATCGGCGAAGCAG
TGGCATCCAAACTGGTGGCTAATGAGACACTTGGTTACTATATGGCCCGC
ATTCAGCAGTTCCTGTTGGCCATTGGTATCAAACCGGAGTGCTTGCGATT
CCGGCAGCACATGTCCAATGAGATGGCTCACTATGCATGCGATTGCTGGG
ATGCCGAAATTCTTACCTCCTACGGATGGGTGGAGTGCGTAGGATGTGCG
GATCGCAGTGCCTACGATTTGGGACAGCATACGGCCGCCACAGGTGTGCG
TTTGGTGGCCGAGAAGCGTCTGCCGGCTCCCAAAACGGTCGAGGTCAGCG
AGATTGTGCCAAACAAGCAGGCTCTCGGAAAGACCTTCAAGAAGGAGGCA
AAGAACATCACGGATGCGTTGGCTAAGCTTTCGCTGGAGGAGATAACCAA
GGTAGAGGAACAGCTGGCTGGCGATGGTCAATACAAACTGACCACGGCCG
ATGGCCAAAGCCACGATCTCGGAAAGGACACCATCAGCGTTAAGCACTCT
ACGAAAACGGTCCATGTGGAGGAGTTCATCCCGAGTGTGGTTGAGCCTTC
ATTCGGCATTGGTCGCATCATGTACTCCCTGTTGGAGCACAGTTTCCAAT
GCCGCGACGGCGACGAGCAGCGGTGCTACTTTACGCTACCGCCTCTGGTG
GCGCCCATCAAGTGCTCCATCCTTCCGCTGTCCAACAACACCGACTTTCA
ACCTTATACTCAGAAACTGTCTTCTGCCCTGACCAAGGCGGAACTTTCGC
ACAAGGTGGACGACTCCAGTGGATCCATTGGCAGGCGGTATGCCCGCACG
GATGAGATTGCCATACCCTATGGCATCACCGTGGACTTCGACACTCTAAA
GGAACCGCATACGGTGACTCTGCGAGATCGGAATACTATGAAACAGGTGC
GCGTCGGTCTGGAGGAGGTTGTGGGCGTCGTCAAGGACTTGTCGACGGCG
AGAACCACCTGGGAGAGTGTCACCGAACAGTATCCTCTGTTCGAACAGCA
GGAGGCCAGCAAGTAACTGGTTGATCAAGGAGTTTCTTTCGCTTGGCACG
CATTTACAGAGTTTCAAAGTTTTCTTATTTTTGTATAAATAAAATTCAAT
AATTCAATAATTTCTTATAAAATTCAATAAATATGCAACATTTAAAAAAA
AAAAAAAAAAAA

GH09263.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:37:22
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-gly-RA 2564 Aats-gly-RA 97..2541 1..2445 12225 100 Plus
Aats-gly.b 2505 Aats-gly.b 87..2503 29..2445 12085 100 Plus
Aats-gly.a 2486 Aats-gly.a 69..2484 30..2445 12080 100 Plus
Aats-gly.b 2505 Aats-gly.b 40..69 1..30 150 100 Plus
Aats-gly.a 2486 Aats-gly.a 14..43 1..30 150 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:34:56
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 15085339..15087754 29..2443 11615 98.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:40:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:34:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15095272..15097688 29..2445 12085 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:58:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 15088372..15090788 29..2445 12085 100 Plus
3L 28103327 3L 15088256..15088285 1..30 150 100 Plus
Blast to na_te.dros performed on 2019-03-15 17:34:54 has no hits.

GH09263.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:35:38 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 15085223..15085252 1..30 100 -> Plus
chr3L 15085341..15087689 31..2373 99 <- Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:30:11 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gly-RB 8..2298 26..2316 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:28:30 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gly-RB 8..2298 26..2316 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:40:25 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gly-RB 8..2298 26..2316 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:01:52 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gly-RB 8..2298 26..2316 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:41:28 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gly-RB 8..2298 26..2316 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:28:29 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gly-RA 1..2443 1..2443 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:28:29 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gly-RA 1..2443 1..2443 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:40:25 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gly-RA 15..2457 1..2443 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:01:52 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gly-RA 1..2443 1..2443 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:41:28 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gly-RA 15..2457 1..2443 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:35:38 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15095156..15095185 1..30 100 -> Plus
3L 15095274..15097686 31..2443 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:35:38 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15095156..15095185 1..30 100 -> Plus
3L 15095274..15097686 31..2443 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:35:38 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15095156..15095185 1..30 100 -> Plus
3L 15095274..15097686 31..2443 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:40:25 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15088256..15088285 1..30 100 -> Plus
arm_3L 15088374..15090786 31..2443 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:39:47 Download gff for GH09263.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15088374..15090786 31..2443 100   Plus
3L 15088256..15088285 1..30 100 -> Plus

GH09263.hyp Sequence

Translation from 1 to 2315

> GH09263.hyp
SKSKLQPKVKLLKALPHLRSATTAVRTQIARTTWSEHIATKVFFSTTTTK
PTPSAPPPPPPTQPQQPAATTSWGTKKQNRKVKLRSAAAEFIMSNPEIEA
QLAPLRERVQEQGNLVRDLKAKGAPEIDVKKAVAELKARKKLLEDKELAL
TPSVVSFDRAKMEDLLKRRFFYDQSFAIYGGITGQYDFGPMGCALKSNIL
ALWRQYFALEEQMLEVDCSILTPEPVLKASGHVERFADLMVKDVKTGECF
RLDHLIKQALEKLSKAKDATPALQAECEDIIIKLDGLNKQELAGVLAKYN
IKSPLTGNDLTEPIEFNLMFATQIGPTGLVKGFLRPETAQGIFVNFKRLL
EFNQGKLPFAVAQIGNSFRNEISPRSGLIRVREFTMAEIEHFCDPVLKDH
PKFGNIKSEKLTLYSACNQMDGKSAAQVQIGEAVASKLVANETLGYYMAR
IQQFLLAIGIKPECLRFRQHMSNEMAHYACDCWDAEILTSYGWVECVGCA
DRSAYDLGQHTAATGVRLVAEKRLPAPKTVEVSEIVPNKQALGKTFKKEA
KNITDALAKLSLEEITKVEEQLAGDGQYKLTTADGQSHDLGKDTISVKHS
TKTVHVEEFIPSVVEPSFGIGRIMYSLLEHSFQCRDGDEQRCYFTLPPLV
APIKCSILPLSNNTDFQPYTQKLSSALTKAELSHKVDDSSGSIGRRYART
DEIAIPYGITVDFDTLKEPHTVTLRDRNTMKQVRVGLEEVVGVVKDLSTA
RTTWESVTEQYPLFEQQEASK*

GH09263.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:44:19
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-gly-PC 765 CG6778-PC 3..765 9..771 3919 99.7 Plus
Aats-gly-PB 765 CG6778-PB 3..765 9..771 3919 99.7 Plus
Aats-gly-PA 679 CG6778-PA 1..679 93..771 3490 100 Plus

GH09263.pep Sequence

Translation from 276 to 2315

> GH09263.pep
MSNPEIEAQLAPLRERVQEQGNLVRDLKAKGAPEIDVKKAVAELKARKKL
LEDKELALTPSVVSFDRAKMEDLLKRRFFYDQSFAIYGGITGQYDFGPMG
CALKSNILALWRQYFALEEQMLEVDCSILTPEPVLKASGHVERFADLMVK
DVKTGECFRLDHLIKQALEKLSKAKDATPALQAECEDIIIKLDGLNKQEL
AGVLAKYNIKSPLTGNDLTEPIEFNLMFATQIGPTGLVKGFLRPETAQGI
FVNFKRLLEFNQGKLPFAVAQIGNSFRNEISPRSGLIRVREFTMAEIEHF
CDPVLKDHPKFGNIKSEKLTLYSACNQMDGKSAAQVQIGEAVASKLVANE
TLGYYMARIQQFLLAIGIKPECLRFRQHMSNEMAHYACDCWDAEILTSYG
WVECVGCADRSAYDLGQHTAATGVRLVAEKRLPAPKTVEVSEIVPNKQAL
GKTFKKEAKNITDALAKLSLEEITKVEEQLAGDGQYKLTTADGQSHDLGK
DTISVKHSTKTVHVEEFIPSVVEPSFGIGRIMYSLLEHSFQCRDGDEQRC
YFTLPPLVAPIKCSILPLSNNTDFQPYTQKLSSALTKAELSHKVDDSSGS
IGRRYARTDEIAIPYGITVDFDTLKEPHTVTLRDRNTMKQVRVGLEEVVG
VVKDLSTARTTWESVTEQYPLFEQQEASK*

GH09263.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:16:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23682-PA 765 GF23682-PA 87..765 1..679 3467 95.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:16:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15715-PA 767 GG15715-PA 89..767 1..679 3619 99 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:16:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14827-PA 679 GH14827-PA 1..679 1..679 3318 89.7 Plus
Dgri\GH14826-PA 679 GH14826-PA 1..679 1..679 3293 89 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:04
Subject Length Description Subject Range Query Range Score Percent Strand
GlyRS-PC 765 CG6778-PC 87..765 1..679 3490 100 Plus
GlyRS-PB 765 CG6778-PB 87..765 1..679 3490 100 Plus
GlyRS-PA 679 CG6778-PA 1..679 1..679 3490 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:16:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13931-PA 679 GI13931-PA 1..679 1..679 3308 89.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:16:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24717-PA 679 GL24717-PA 1..679 1..679 3418 92.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:16:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19857-PA 679 GA19857-PA 1..679 1..679 3427 92.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:16:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25502-PA 767 GM25502-PA 89..767 1..679 3630 99.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:16:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14521-PA 767 GD14521-PA 89..767 1..679 3640 99.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:16:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13721-PA 679 GJ13721-PA 1..679 1..679 3350 90.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:16:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17767-PA 764 GK17767-PA 86..764 1..679 3247 88.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:16:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22046-PA 767 GE22046-PA 89..767 1..679 3632 99.3 Plus