BDGP Sequence Production Resources |
Search the DGRC for GH09289
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 92 |
Well: | 89 |
Vector: | pOT2 |
Associated Gene/Transcript | Tm1-RC |
Protein status: | GH09289.pep: gold |
Preliminary Size: | 3648 |
Sequenced Size: | 3662 |
Gene | Date | Evidence |
---|---|---|
CG4898 | 2001-01-01 | Release 2 assignment |
CG4898 | 2001-09-19 | Blastp of sequenced clone |
Tm1 | 2008-04-29 | Release 5.5 accounting |
Tm1 | 2008-08-15 | Release 5.9 accounting |
Tm1 | 2008-12-18 | 5.12 accounting |
3662 bp (3662 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060262
> GH09289.complete GAAAAAGCAGCAGAAAAGCCAGCAGCAGCCGCCCGCTCATAAATCTAGCA AGAAAAACCTAATTAATTCAATTAATTACTACCAAAATCATACCGGCATA CGTTAAATAAAAACCCGTTCGGTCTAATTAAAATTTACCAAAAATCACTG CTTTCATTTAAAGCGATTTTAAGTGAAATTCTAGTGATTTGTATAATTAC ATAAAAAGTGTTGCGGAAATTGACTCTCTCTATCTTTCTCTGCAAATTTT CACGCGCCGATGAAAATTCGCAAAAGATCTGTATTAAATCATCAATAAAA ATAGCGAAACTAACGGTGCAATGAATCCAGCTGTTTGAAATCCGCAACAT AAAAGCAAAAAACACAAAACTATAAAACAACACGCACCGAATCACACGGA AACAACAACAACAATAGGCATTGCTCATAATTAATATGTACGAGAAAACA TTAAACATAGGAACTGCGAAAGTTAATAATGCATATGAATGGCAAAAAGT GAGATACAACAACAAACCCCAACCGACAACAACAGCAGCAGCTGCAGTTA AACCTAAACCACAACAACAACAAGTTCAAAAACAGAAAAATGCAACAAAA GCCGCGCCAGCAACAACTACAGCTGCAACAACAACAGCAACAGTGCCACC GTTAGCCGGCAACAGCGTTACCGTTAAGCAAGGCCCCAAAATCAAATTTG TTGGCAACGCGGCGCGCCGCCAATCGTTGGCCCATCAAATCAAGCGAGCA CATCGGCATTTACTGACCAGTGGCGGTCAGGATAAGCAGCCGCAGCAAAA GCGTAAACAGTTTATCTATTCTTTAATGCGAATTTCAAATTGCCAAAATC TACACGCGCACACCAGCTGCAAGTGCGCTAGCAGTCAGCCTTGGACAGTG CGCATGTGGTTGGCAATGCAAATTCCACATGATCAGCAAGAAATGCACCG TTGCCAGCACTTCCAAGCCAATTGGTATTTTCGGCATATTCCAGACTGGT CACACTGCCCCATCCAGCAACAGCTGGTTCCAGTAAAAAAAATTCACGTA GCAATTTTGGCCACAAATTACCCAAAAATTAAAGTAAATTATTGCATTTT GTAAATATTAAGGAATTAACGCAACATAACAGTTTGTAAATATGCACAAA ATACCAATTGGAAGCAGTGGTCAACACGGTCAACACGACCCTAAACATAG TCAATCGAAGAAAAACCCATTTTAACTTTTCAGAAAAAACACAAGTGCAG CCGCAGTCGGGCAAAACAGTTGCCAAACCGAAACAGAGGCAGCAGAAACA ATTGTTCAAAAGTGATAAGGCGAAGGAGAAGTCCAGCAGGCAGCAGAGAA AGCGAGCCGGCACCAGGAGCACTCGCAATCCGAGGACGCAATCGGAATCT TCGGGCCTGTCATCCCGTTGGTGTTCCATCGAAGAGCAGTTGAACCTGCT GGACGACCTGCTCTACTACTGCGATGAGGAGGCCGAACTGTATCTAGCCC AGCTGTACGAAAGGTTCGAGACACTCCGGCGTAGCAGGAGTTCCTCGCCA GTGAGCGATTTCTGGAGCGATTCCGACATGGAGCACGATGACTCCAGCAC CAGTGGCACTGGCAGCCATACAGCCAGCAATACCAGTCTAGTTCCCGCCT CGCTGAAGCGTCGTGGCCACCAGCATCATCCGCGATTCTCGGGCACTCGC CGTCCCAATGTGCCCAATGTCCAGGAGATTCTGGCCGCACTCTATCGTGG CGACTCAAAGAGCGCCCTGTCCAATCTGAGAGGAGAGACGCAACCGGAGG AGGAGCAACCACAGCAGCAGACGGAGGAGGTGCTGCCACCCAGCAGAAGC ACTTTAAGCCTGCCCCTCAGTGAATCGGTGACCAATTCCCTGGGCAGCAA CAGTCCCACGCCCACAGACGAAAGCAGCGTGCAAGATGAGGGGGCCAGTA ATCCGGCAGCAGCTTTAATAGCTGAGGATGCAGCCCCACCAGCAGGCACA ACCACGTCCAAGAGCAAGAAAAAGAAGCGGGAGAAGGGTGAAAGGTCAGA GAAATCGGACAAATCTGAGAAATCCGACCGGAAGAAGAAATCTTCAGGCA AGAAGGAACGCAGCAAACGATCCAATCCCATGGAGCAAAGCAGCGACAGC CTGGCCACCGATCTCAGTGCCGGGGCCATCGATGAGGGCATCGCACTGGC CGACGACGATGACAACCAAGCGGCGGAATGGTCCAAGTTGCGATGCACCA GCGAGGCGGCCGAGATTGTGGCGGAGCGGGAGGCTCGACGGAACAAGGGA CGTTGTGCGGATTATCCGGGACTCGCCTTTGGCAGATCCATCTTCAGTTC GGACACCATGATGAAGTTCAACATCATCCGCAACGAGCTGCACAACATCA TGAACACACAACTCAAACGGGCCGAATCCGAGGTTGCCGCTCTGAACCGT CGCATCCAGTTGCTCGAAGAAGACTTGGAGCGCTCTGAGGAGCGTCTGGG CTCCGCCACAGCCAAGCTGTCGGAAGCCTCTCAGGCCGCCGATGAGAGCG AACGTGCTCGCAAAATTCTTGAGAACCGCGCCCTTGCCGATGAAGAACGC ATGGACGCTCTCGAGAATCAGCTGAAGGAAGCGCGTTTCCTTGCTGAGGA GGCTGACAAGAAATACGATGAGGTGCAGCTAAAAACCAATTTGTCTTCTA TTAAGCTAAGCAACAATAACAACAACAGTAACAGTAACAATATTGAAATC AGTAAATCAGAATCATGCAATGCCAGCGATATTGGTGGCACCAACAACAA TAACGCATCCAGAACTATTGCATCTGCTGCTGTTGGTGAAGAGACTTCCA CCTTGTCCTCCACAAGCCACGAACACAACAACAATCCCAACAACGACACC TGATCTGGTTCCTTTGTCAAGCGGATATTAAAGTAACTTGAATTTGAATT GAATGATTGATAAAGGGTTAACCGAAACCCGAATCTTGGCACAGGAATCA GCCAGTGCGTTGATGCAAAACTTGTGCTTACCACGACGATTACGAATGAT GCTTGAGGGCAGTTAGAGCTTAGATCTAGACCTAGATCATGCACAGCCCG CCCGCCCGCCTGACCATATGCAATATATATACGTGTATAGATTATGACGA TGATAATGATGATGATAATGATGATGTATTAGTCGATGTACATATGTACA ATGTAAATCCAATCCAATGAACTTTCGATTGTAATGGAGTTTCGTGTGTA TTTTAATGTGTAAAATACCAATGGCAATATGTAAAGTAATTGTTAAGCGG TCCATACAATGTCCACAAGTACTCTATTAATTGTCCTCAATGCTCTTCCA CGTCAAAAAGCTTGAGAAGCATATCGCCACTGAAAATTGATTGTTAAAAG TAAATCGTAATTGGGTTAGTTTCTTAAATTGTTCTTTTTATTTCCATTCA ATTTCCAATTACATAATTGTAAAGAAAATGTAATTTATACTCACGTTAAA TGCATAGAGAAACACACCTTAAGTTTAAAATTAACCCAAGGAAATATCTA ATTTTGGAATAATATTTTTGCAAATTATTGTTTATATACATAACATATTA TATACTACAAAAATATATAAATACAAATATATAATTGCAGCATAAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tm1.d | 2567 | Tm1.d | 135..2567 | 1211..3643 | 12165 | 100 | Plus |
Tm1-RH | 3054 | Tm1-RH | 645..3054 | 1234..3643 | 12050 | 100 | Plus |
Tm1.c | 2544 | Tm1.c | 135..2544 | 1234..3643 | 12050 | 100 | Plus |
Tm1-RH | 3054 | Tm1-RH | 145..644 | 303..802 | 2500 | 100 | Plus |
Tm1.d | 2567 | Tm1.d | 1..134 | 1002..1135 | 670 | 100 | Plus |
Tm1.c | 2544 | Tm1.c | 1..134 | 1002..1135 | 670 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11111650..11114070 | 1..2421 | 11890 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 11121224..11122313 | 2554..3643 | 5435 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 11119748..11119882 | 2420..2554 | 675 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15287020..15289440 | 1..2421 | 12075 | 99.9 | Plus |
3R | 32079331 | 3R | 15296590..15297683 | 2554..3647 | 5470 | 100 | Plus |
3R | 32079331 | 3R | 15295112..15295246 | 2420..2554 | 675 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15027851..15030271 | 1..2421 | 12075 | 99.9 | Plus |
3R | 31820162 | 3R | 15037421..15038514 | 2554..3647 | 5470 | 100 | Plus |
3R | 31820162 | 3R | 15035943..15036077 | 2420..2554 | 675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11111650..11112154 | 1..505 | 100 | == | Plus |
chr3R | 11112292..11114069 | 643..2420 | 99 | -> | Plus |
chr3R | 11119749..11119882 | 2421..2554 | 100 | -> | Plus |
chr3R | 11121225..11122241 | 2555..3571 | 92 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tm1-RH | 368..2037 | 1234..2903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tm1-RH | 368..2037 | 1234..2903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tm1-RH | 368..2037 | 1234..2903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tm1-RH | 368..2037 | 1234..2903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tm1-RH | 368..2037 | 1234..2903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tm1-RC | 22..3664 | 1..3643 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tm1-RC | 370..4012 | 1..3643 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tm1-RC | 1..2651 | 993..3643 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tm1-RC | 22..3664 | 1..3643 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tm1-RC | 1..2651 | 993..3643 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15287020..15289439 | 1..2420 | 99 | -> | Plus |
3R | 15295113..15295246 | 2421..2554 | 100 | -> | Plus |
3R | 15296591..15297679 | 2555..3643 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15287020..15289439 | 1..2420 | 99 | -> | Plus |
3R | 15295113..15295246 | 2421..2554 | 100 | -> | Plus |
3R | 15296591..15297679 | 2555..3643 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15287020..15289439 | 1..2420 | 99 | -> | Plus |
3R | 15295113..15295246 | 2421..2554 | 100 | -> | Plus |
3R | 15296591..15297679 | 2555..3643 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11112742..11115161 | 1..2420 | 99 | -> | Plus |
arm_3R | 11120835..11120968 | 2421..2554 | 100 | -> | Plus |
arm_3R | 11122313..11123401 | 2555..3643 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15027851..15030270 | 1..2420 | 99 | -> | Plus |
3R | 15035944..15036077 | 2421..2554 | 100 | -> | Plus |
3R | 15037422..15038510 | 2555..3643 | 100 | Plus |
Translation from 1577 to 2902
> GH09289.hyp MEHDDSSTSGTGSHTASNTSLVPASLKRRGHQHHPRFSGTRRPNVPNVQE ILAALYRGDSKSALSNLRGETQPEEEQPQQQTEEVLPPSRSTLSLPLSES VTNSLGSNSPTPTDESSVQDEGASNPAAALIAEDAAPPAGTTTSKSKKKK REKGERSEKSDKSEKSDRKKKSSGKKERSKRSNPMEQSSDSLATDLSAGA IDEGIALADDDDNQAAEWSKLRCTSEAAEIVAEREARRNKGRCADYPGLA FGRSIFSSDTMMKFNIIRNELHNIMNTQLKRAESEVAALNRRIQLLEEDL ERSEERLGSATAKLSEASQAADESERARKILENRALADEERMDALENQLK EARFLAEEADKKYDEVQLKTNLSSIKLSNNNNNSNSNNIEISKSESCNAS DIGGTNNNNASRTIASAAVGEETSTLSSTSHEHNNNPNNDT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tm1-PH | 678 | CG4898-PH | 238..678 | 1..441 | 2205 | 100 | Plus |
Tm1-PC | 441 | CG4898-PC | 1..441 | 1..441 | 2205 | 100 | Plus |
Tm1-PI | 441 | CG4898-PI | 1..441 | 1..441 | 2205 | 100 | Plus |
Tm1-PE | 711 | CG4898-PE | 226..620 | 1..395 | 1828 | 93.7 | Plus |
Tm1-PO | 285 | CG4898-PO | 75..194 | 276..395 | 415 | 75.8 | Plus |
Translation from 1577 to 2902
> GH09289.pep MEHDDSSTSGTGSHTASNTSLVPASLKRRGHQHHPRFSGTRRPNVPNVQE ILAALYRGDSKSALSNLRGETQPEEEQPQQQTEEVLPPSRSTLSLPLSES VTNSLGSNSPTPTDESSVQDEGASNPAAALIAEDAAPPAGTTTSKSKKKK REKGERSEKSDKSEKSDRKKKSSGKKERSKRSNPMEQSSDSLATDLSAGA IDEGIALADDDDNQAAEWSKLRCTSEAAEIVAEREARRNKGRCADYPGLA FGRSIFSSDTMMKFNIIRNELHNIMNTQLKRAESEVAALNRRIQLLEEDL ERSEERLGSATAKLSEASQAADESERARKILENRALADEERMDALENQLK EARFLAEEADKKYDEVQLKTNLSSIKLSNNNNNSNSNNIEISKSESCNAS DIGGTNNNNASRTIASAAVGEETSTLSSTSHEHNNNPNNDT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11453-PA | 902 | GF11453-PA | 338..762 | 2..366 | 1173 | 62.8 | Plus |
Dana\GF11475-PA | 284 | GF11475-PA | 82..165 | 283..366 | 255 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16908-PA | 769 | GG16908-PA | 210..628 | 1..366 | 1578 | 81.5 | Plus |
Dere\GG16909-PA | 284 | GG16909-PA | 82..165 | 283..366 | 247 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18857-PA | 983 | GH18857-PA | 267..677 | 6..366 | 1226 | 66.3 | Plus |
Dgri\GH18858-PA | 284 | GH18858-PA | 82..165 | 283..366 | 246 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tm1-PH | 678 | CG4898-PH | 238..678 | 1..441 | 2205 | 100 | Plus |
Tm1-PC | 441 | CG4898-PC | 1..441 | 1..441 | 2205 | 100 | Plus |
Tm1-PI | 441 | CG4898-PI | 1..441 | 1..441 | 2205 | 100 | Plus |
Tm1-PE | 711 | CG4898-PE | 226..620 | 1..395 | 1828 | 93.7 | Plus |
Tm1-PO | 285 | CG4898-PO | 75..194 | 276..395 | 415 | 75.8 | Plus |
Tm1-PM | 285 | CG4898-PM | 75..194 | 276..395 | 415 | 75.8 | Plus |
Tm1-PG | 285 | CG4898-PG | 75..194 | 276..395 | 415 | 75.8 | Plus |
Tm1-PJ | 285 | CG4898-PJ | 75..194 | 276..395 | 415 | 75.8 | Plus |
Tm1-PF | 501 | CG4898-PF | 75..194 | 276..395 | 415 | 75.8 | Plus |
Tm1-PK | 518 | CG4898-PK | 75..194 | 276..395 | 415 | 75.8 | Plus |
Tm1-PL | 284 | CG4898-PL | 75..222 | 276..432 | 345 | 52.2 | Plus |
Tm1-PA | 252 | CG4898-PA | 21..190 | 257..432 | 343 | 47.5 | Plus |
Tm1-PN | 285 | CG4898-PN | 75..189 | 276..395 | 338 | 61.7 | Plus |
Tm1-PQ | 250 | CG4898-PQ | 21..157 | 257..395 | 336 | 54.2 | Plus |
Tm1-PS | 285 | CG4898-PS | 75..194 | 276..395 | 335 | 60.8 | Plus |
Tm1-PR | 250 | CG4898-PR | 21..162 | 257..395 | 333 | 53.5 | Plus |
Tm2-PG | 284 | CG4843-PG | 78..194 | 279..395 | 268 | 52.1 | Plus |
Tm2-PF | 284 | CG4843-PF | 78..194 | 279..395 | 268 | 52.1 | Plus |
Tm2-PE | 284 | CG4843-PE | 78..194 | 279..395 | 268 | 52.1 | Plus |
Tm2-PC | 284 | CG4843-PC | 78..194 | 279..395 | 268 | 52.1 | Plus |
Tm2-PB | 284 | CG4843-PB | 78..194 | 279..395 | 268 | 52.1 | Plus |
Tm2-PA | 284 | CG4843-PA | 78..194 | 279..395 | 268 | 52.1 | Plus |
Tm1-PP | 161 | CG4898-PP | 75..125 | 276..326 | 216 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22927-PA | 914 | GI22927-PA | 201..619 | 6..366 | 1052 | 58.5 | Plus |
Dmoj\GI22929-PA | 284 | GI22929-PA | 82..165 | 283..366 | 254 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12543-PA | 1005 | GL12543-PA | 261..633 | 20..366 | 1241 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Tm1-PB | 704 | GA30232-PB | 209..584 | 4..366 | 1317 | 76.9 | Plus |
Dpse\Tm1-PE | 285 | GA30232-PE | 75..165 | 276..366 | 420 | 95.6 | Plus |
Dpse\Tm1-PC | 511 | GA30232-PC | 75..165 | 276..366 | 415 | 95.6 | Plus |
Dpse\Tm1-PD | 252 | GA30232-PD | 24..183 | 235..425 | 318 | 44.5 | Plus |
Dpse\Tm2-PA | 284 | GA18472-PA | 82..165 | 283..366 | 246 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24215-PA | 732 | GM24215-PA | 226..591 | 1..366 | 1503 | 92.6 | Plus |
Dsec\GM24216-PA | 284 | GM24216-PA | 82..165 | 283..366 | 247 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19006-PA | 732 | GD19006-PA | 226..591 | 1..366 | 1560 | 97.3 | Plus |
Dsim\GD15159-PA | 300 | GD15159-PA | 82..165 | 283..366 | 248 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23210-PA | 911 | GJ23210-PA | 274..691 | 6..366 | 1189 | 62.4 | Plus |
Dvir\GJ23212-PA | 284 | GJ23212-PA | 82..165 | 283..366 | 254 | 66.7 | Plus |