Clone GH09323 Report

Gene	Date	Evidence
CG18250	2001-11-29	Blastp of sequenced clone
CG18250	2003-01-01	Sim4 clustering to Release 3
Dg	2008-04-29	Release 5.5 accounting
Dg	2008-08-15	Release 5.9 accounting
Dg	2008-12-18	5.12 accounting

Clone Sequence Records

GH09323.complete Sequence

5729 bp (5729 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069076

> GH09323.complete
CAACAACAACCACAACTCGGTGCCGTTAGGGCTGCGTTTGTTTTCTGCTC
CCATTCAGCTGCATAGAAAAGAAAGAAAAGTGAAAAGTGTTCGGAAAACA
GGCAGCATGTGAAGCATAATTACTCCACGGAATTACTATCTCAAACGAAA
TAGTTGTCGCCGAAAAGAAGTGCGTAAAATCGCGAGTGAGCTCGTGAAAA
TAGAATAAAAAAGCGCTCTGCAATTGAAGAGAAACATTGCTGCAGTCGTG
TGTACGTGCGTGTGTTTGTGCGTGCGAGTGTGAGTGTCGCTCTCTGGACG
CAATTTCTTTGGCCAAAAGAGTGGGGAAGTGGGGCAGGAGAGTCCCGAAT
CGAATCCCCGAAACAGGCAATCCGAATCCGAATCCGGTGCATTAAAAATA
GCGCAACGAGATGGTGAAGGCGCTGCTAACGAAGATGATAATGTAAATGC
CGCATCGACGCATCCCCTTTCTCTTCTCTCTCCAAACGAAAGCGAAATCC
CAGCTGGGAAACTGTAGCTCCAGCTAAAACCGAACCAGCAAAACAAAACC
GAAATCGAAACTGCATTCTTTGGACTCATATTTATATCACATAACGACAC
ATATCGCCGACGGAACCGAACATGAGATTCCAGTGGTTCTTATCGGCCAG
TGCGAGCTTGTCGCTGTTCCTTCTCCTGGACTTCGTCGTATGGATTCACG
GCGAGCGGGACTTCAATGTCAACGACTCCCAGGTCCCTGTAATTGAGCCA
AAGGATGTGCCCGCCTACAAACAGGATCCGTATGTTACGGAATTGATGAG
TTGCCAAAATACTCCGAGTGAAATTGTGCTTTCACTTTTGTTGAAGAAGC
ACGACTGGAGTGAGCTGACGGCCACGAAACGAGCTCATGTCCAGGCCAAG
TTGGCCAAGTTCTTTGCCATACCCAAGGAATTCATTTCCCTGGATTCGGT
GTCTAAACGCGAACTGAGATCCATGCACAAGTTGGCCATGAGAAAAGGAG
GCAAGGGCAACAAGAATATCGAGACCCTGAATCGTCGCCTGGGACGCGCC
AGTTTCATGATCGGCTGTGGTCCAAGCTACTTTGTGATGGGCGAACCGAT
AGCCAAGCAGATTGCCCACCAAATGAAGGATGGCACCATTGGCGCTTTGA
CGGAGGAGAACTTCGGGCTGTGGTTCATTTGGCGAAAGGAATTGAAATCA
AGATCAAACCGCAAGCGACGTCAATCCGAGGGCTCTGGTGCCGATGAAGA
TGACTACGACTATGGGGATGACGATGAGGAAGTTGCTGAGCCCAGTACGG
AAGTGCCACCAGTGACCACACATGCCCATCGACATCATCACGGAGCGCCA
AATACTGTGCTTAATGAGCTCGAGCTGAGCACCCAGCTGCCCATCGACGA
TTTTGAAGGCACTGCTACTGCAACACAGCCAACTGGCACTGCAACTGCAA
CTGCCATTGCAAGCACAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCA
ACCGCAACAGCCACAACTGCCAATGCATCTGCAACAACAGCAGGCGAAAG
CGAATTTCATATAGAGTCCACAACGCACCGCACGATTAGCTCTAAGGAAG
GAGGAGAACCCGATGCCATCAGCAGCGGCAACAATAGCCTGGCCAATAAT
GAGCTGTCGACGCCCGCCACGCCCACATCTTCGGTGGCCACGACCACGGC
ATCTACTCCGGAGTCGAGCAGCATCAGCAGCAACTTTGTCTCCACCGACT
ACATGGAACCGCAGCCGGAAGAGAATAGTCCGCCCATCATCAAGACACGC
CTGCAGAAGCTGGCTGTCACATCGGGCAAGGCCTTCACCTTCCATGTGCT
ACCGGAAACGTTTTACGATGCCGAGGATCAGGGTAATCTCCGCCTGGCGC
TCACCGACAAGGATGGCCACGAGCTAAAGGCGAACTCTTGGCTGCAGTTT
AACGCCGACAAGAGGGAGCTTTATGGCCTACCTCTGGACGACACGGTATC
CCGCTGGCAATATCGCCTGTCGGCCACGGATTCGGGCAACGCCAGTGTCA
CGGAAACCGTGGAGATAAGTGTGCAGCAGCATCGAGCGGTTAGGACCATT
AACCACGAGATCAGTGTTTTTGTACGGATCAACGAGAAGCCGGGTCACAA
CATTGATTGGCAGTTGAAGCTCATTAATGCGGTGGCCAGAACCTTGGATG
ACTCCACCAATTCGGCAGTGGTGGTGCGTGAGATCCGACAGACACCACAC
GATCCACACAGTGCCACCTTCGTGTATTTTAATGAAACGCTGCCCACCAG
CGAGTGTCCCGAAAAGGAACTAAAGGATATTATTGCACGACTGGATGCCA
ATAGACTGAGTGATTTGGTTCAGCCACAGCTGGGAATCAAATCTATAACA
GGACAGTTAATCGGATCCTGTCAGAAGGATTTAACTCAGGTGAAGCCCAC
GCAACACATGACCAAGAATGTGCCTCCAATGCCACGCAACCAGGTGGATC
GCGTTAACGCTAGCTTGGGCCAGCTGCTGGTCTACAAAGTGCCGGCGGAT
ACCTTCTATGATGCGAACGACAATCAATTGACTCTTACGTTGAAAACCAG
GGATCACCTTGAGCTTAGCCCACGCCACTGGCTGCAGTTCGACTCCAAGA
ACGAAGAGTTCTATGGCATTCCGAAAAGCGGTGACATTGGTTCCGAGGAA
TATCTGTTGGTCGCCGAAGACAGTGGTGGCCTGAGTGCCCATGATGCCCT
GGTTGTAGTGGTTAGCCCAGCGCCAAAGCGTGACTTTGGGTTCTTCTTCA
AAGCGTATCTGTCTATCAAACACGAGCGATTCAATGCCGATCTGCAGCGG
AAGTTTGTAGAGCGTGTAGCGAAGCTGAATGGAGATCCTACTACTGGCCA
GATCCAGATCCGTTCGATAACCACGCACCACGACTCCGATGGCACCATAG
TGAACTTCTACAATACGACGCTGTACAGGAAGCACAACAGTTGTCGGGAG
AAGGAAGTGGCCATGACTAGGAGTGTCTACCTAAACAGTGACCTCAGCCT
GAGGGAGGCAGCCAAACGGGCTCTGGGACCCGAGCTCAATTTGACCAACT
TTTCGGTGGTGCCCTTCAGTATTTGTCATCATACTGAGAACATAGACACC
AACCAACTTGATTATATACCTAGTCGCCCCGAAGAGCCTACACATAAGTC
CTCTTTCGGCGAGGATTACATGATCACGTTCGTATGGCCCATCGTGATCA
TTGTGGCGATGCTTGTGGCTGCCTCAATCATTGCCTGTTGCCTGCACTGG
TGTCGCCAAAGGAGCGGCAAAATGGAGCTAGGCGACGAAGAGGAGCGCAA
GTCCTTCCGTGCCAAGGGTATTCCCGTCATCTTTCAGGACGAGTACGAGG
AGAAGCCCGAGATCGGCAACAAGAGTCCTGTCATACTCAAGGACGAGAAG
CCGCCGCTGCTGCCACCATCCTACAATACCTCAAACATGAATGGTGACAA
CGACGTGGACGATTATGTGCCACCACCATCGGTGGTTGTGGGCGGCCGGG
AAGTGCGTGGCAAGTCGCCAGCCACGCCCTCCTACCGCAAACCACCGCCA
TATGTGTCGCCATAAATCAGTGTCAAGAGCAGCAGGAAAGCAGCAAACCA
GATTGGAAGCAACTGCAACAATAATAACAATCGCATCGTATTAACCACAC
AATCTACATAGATATATACATATATATATTTAACCGATTTGGCACAAGTT
ATATGCAACTAAGCAAACTCTTTTGTATATATCCAAGTGCAAATTGGTTT
CTTTGGACACTGTATTCGAATTGAGGGAAACTGCATCCCAGCCGAGAAGT
ATTCGCCAAGTCGATGGAGTTTTTTTATGGATAACGTTTTGTATTAGCCG
AGAATGGAGAAACAATCATGTGCTAAATTACTGGCAAACATAAAGTCTAC
ACCGTTGGACTATCGAGTATCACTAACACAAAACACAAATCGATGAACTA
TGCTGCATATTATTTATTTAGTATGTACTCTAATTTATATGTAAACCACG
CGAACCACAAGGACACAAATGGTGTTTGTTAGGACACAAGCATCGGAGCT
TGAAAAACACACAGACACATGCACACGAGCCCATTTTAAGCATAGCATTT
AAAACTCTTTGTACTAAAATTAAGTTAAACGCGAGAAAGAAGGCACACAT
GTCCATCGTCCCACGTCCCTGGGCAGCTATTAGACTTTCAGCTTGATTTG
CTCAAGCTGAATTGCTTGCATGTTTTTTTTTTTTGAATTATCGGACCACT
ATGCTGCATATTTCCATCAAAGGATCAGGGGAACCACCGAGGCAGGCTGC
GTACTTGCCGCTGTTTGGTGCCCAATTGAGTTTAGTACTTTAGTTGTTTT
ACCATTGGCTTAACTTACTGGGACGTACGGCGAAGGACGTGTCCGAAAGG
AGCTTGATTATTTTACATTCTAAGAAGCAATCGAACCCACAATAGTGCTG
CCAATAATCCAGGTACTCGGATCGAACTAGCCGTTTGAATACCAAACGAT
TCCTAATTACCCACAAGTGCTTCCCACAGACAGACAAACCAACAGACCAT
ATCCACCAGACACACAACATACAACATACAACACACACACACACAAATAT
TTATACGAAAATTGATTACTTAAAGTAGAATCTAGTTTTAAATGATTTTC
ACAAGCTCCCCTTTGGATAATTCTATGTGAAATGGTTAGATTAGTTTATA
TGTAGCTGCTAGTTGGGCAGTACTTACTACACTACTACCTACTACTATCT
GCTACCTAATCCAACCGTCCCTTATCCCTGAATCGAACTAACATGTAGTG
AGTAAAGCATTGATTTTATATGAACTTATAGTGGAAGTCCAGAGCCTAAG
TTAGAGCAATAGTTGCATGAAGGATGGGAAATGAAATTGAAATGGAAATT
GAACTTGAATATGAAATTGAATTACTTTACGAGAGGACACTGATTTTGTC
GTCGTGAAAATGTGCACGAAAGTGCTACGCAATTGCCTATTAAACTAAGT
ACGATTAACTAATTTGTGTATTTGCATAAGCTCAACCGCTGAATTATTTA
CATTATGTAATTTGTAATCGAGCAAACAGCGGTCGCATTAGCAACAACAA
CAACAACAGCAACAGCAGCAATAACAACAAACGGTATCAATTTATTTTGA
ATAAAAAAAATGCCAAAGATACGATTTTAGTTGCATTATTATTTGCCAAT
ATTTGCGAATATTTTTTTAGACAAACAAAAACACACACACACGAGAAAAC
ACATAGACAAGAGTAAGTACAGAGCTGGAAAATTGTAATTTTTCTCCAAA
TCAAATAAATAATTGTGCATATTTGTGAAAAATTGACCGAATGGCCATGG
TCGAGTTGCACGTTTAATTAATAGATATATATATAGATATATATATTCAG
TAAAAATCAGAGAAACTATTGTATATTTAATGCAATCTGTTTGCCATTCG
ATTGGCTTCAATTGAGCGAGCTGTACCCTCCACAAATACACAGGCAAATC
AATAAACACATGCAATAATTATAATAATTATTGAGAATAACTAACTGCGT
GAATATAAAGGTACATACATACATACGTACGTATGTACATACATATGTCC
GTATAGGATATACGTATGCATATATACATGGATTCTAATAAACATTTATA
TATTTTGATACAAAAAAAAAAAAAAAAAA

GH09323.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:46:00

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dg-RA	5748	Dg-RA	31..5745	1..5715	28560	99.9	Plus
Dg-RC	6361	Dg-RC	2237..6358	1594..5715	20595	99.9	Plus
Dg-RB	5566	Dg-RB	1444..5563	1596..5715	20585	99.9	Plus
Dg-RC	6361	Dg-RC	98..1444	1..1347	6735	100	Plus
Dg-RB	5566	Dg-RB	98..1444	1..1347	6735	100	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:10:36

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr2R	21145070	chr2R	11968507..11970727	5711..3493	10860	99.4	Minus
chr2R	21145070	chr2R	11971279..11972429	3130..1980	5740	99.9	Minus
chr2R	21145070	chr2R	11985473..11985882	410..1	2020	99.5	Minus
chr2R	21145070	chr2R	11976920..11977245	734..409	1630	100	Minus
chr2R	21145070	chr2R	11972497..11972824	1979..1652	1595	99.1	Minus
chr2R	21145070	chr2R	11973395..11973645	1597..1347	1210	98.8	Minus
chr2R	21145070	chr2R	11976442..11976639	928..731	990	100	Minus
chr2R	21145070	chr2R	11971015..11971216	3332..3131	980	99	Minus
chr2R	21145070	chr2R	11970780..11970948	3496..3328	815	98.8	Minus
chr2R	21145070	chr2R	11976034..11976177	1202..1059	720	100	Minus
chr2R	21145070	chr2R	11976258..11976391	1059..926	670	100	Minus
chr2R	21145070	chr2R	11975803..11975888	1286..1201	430	100	Minus
chr2R	21145070	chr2R	11975656..11975716	1347..1287	305	100	Minus
chr2R	21145070	chr2R	11972897..11972955	1653..1595	280	98.3	Minus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:40:27 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:10:34

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
2R	25286936	2R	16081172..16083394	5715..3493	11100	100	Minus
2R	25286936	2R	16083946..16085096	3130..1980	5755	100	Minus
2R	25286936	2R	16098128..16098537	410..1	2050	100	Minus
2R	25286936	2R	16085164..16085491	1979..1652	1640	100	Minus
2R	25286936	2R	16089569..16089894	734..409	1630	100	Minus
2R	25286936	2R	16086044..16086294	1597..1347	1255	100	Minus
2R	25286936	2R	16083682..16083883	3332..3131	1010	100	Minus
2R	25286936	2R	16089091..16089288	928..731	990	100	Minus
2R	25286936	2R	16083447..16083615	3496..3328	845	100	Minus
2R	25286936	2R	16088683..16088826	1202..1059	720	100	Minus
2R	25286936	2R	16088907..16089040	1059..926	670	100	Minus
2R	25286936	2R	16088452..16088537	1286..1201	430	100	Minus
2R	25286936	2R	16088305..16088365	1347..1287	305	100	Minus
2R	25286936	2R	16085564..16085622	1653..1595	295	100	Minus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:06:19

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
2R	25260384	2R	16082371..16084593	5715..3493	11100	99.9	Minus
2R	25260384	2R	16085145..16086295	3130..1980	5755	100	Minus
2R	25260384	2R	16099327..16099736	410..1	2050	100	Minus
2R	25260384	2R	16086363..16086690	1979..1652	1640	100	Minus
2R	25260384	2R	16090768..16091093	734..409	1630	100	Minus
2R	25260384	2R	16087243..16087493	1597..1347	1255	100	Minus
2R	25260384	2R	16084881..16085082	3332..3131	1010	100	Minus
2R	25260384	2R	16090290..16090487	928..731	990	100	Minus
2R	25260384	2R	16084646..16084814	3496..3328	845	100	Minus
2R	25260384	2R	16089882..16090025	1202..1059	720	100	Minus
2R	25260384	2R	16090106..16090239	1059..926	670	100	Minus
2R	25260384	2R	16089651..16089736	1286..1201	430	100	Minus
2R	25260384	2R	16089504..16089564	1347..1287	305	100	Minus
2R	25260384	2R	16086763..16086821	1653..1595	295	100	Minus

Blast to na_te.dros performed 2019-03-16 07:10:34

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
invader3	5484	invader3 INVADER3 5484bp	5012..5141	3634..3768	149	63	Plus
G-element	4346	G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1).	3414..3449	670..635	126	83.3	Minus

GH09323.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:11:27 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr2R	11976034..11976176	1060..1202	100	<-	Minus
chr2R	11976258..11976389	928..1059	100	<-	Minus
chr2R	11976443..11976637	733..927	100	<-	Minus
chr2R	11973396..11973644	1348..1596	78	<-	Minus
chr2R	11969644..11970726	3494..4574	99	<-	Minus
chr2R	11970783..11970944	3332..3493	98	<-	Minus
chr2R	11971016..11971216	3131..3331	99	<-	Minus
chr2R	11971279..11972429	1980..3130	99	<-	Minus
chr2R	11972497..11972822	1654..1979	99	<-	Minus
chr2R	11972897..11972953	1597..1653	98	<-	Minus
chr2R	11975656..11975716	1287..1347	100	<-	Minus
chr2R	11975803..11975886	1203..1286	100	<-	Minus
chr2R	11976922..11977243	411..732	100	<-	Minus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:19:20 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dg-RA	1..2994	622..3615	100		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:40:12 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dg-RA	1..2994	622..3615	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:43:32 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dg-RA	1..2994	622..3615	100		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:17:37 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dg-RA	1..2994	622..3615	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:27:32 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dg-RA	1..2994	622..3615	100		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:19:20 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dg-RA	1..5711	1..5711	99		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:40:12 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dg-RA	1..5711	1..5711	99		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:43:32 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dg-RA	28..5247	1..5220	99		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:17:37 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dg-RA	1..5711	1..5711	99		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:27:32 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dg-RA	28..5247	1..5220	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:11:27 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	16083683..16083883	3131..3331	100	<-	Minus
2R	16081176..16083393	3494..5711	99	<-	Minus
2R	16083450..16083611	3332..3493	100	<-	Minus
2R	16098128..16098537	1..410	100		Minus
2R	16083946..16085096	1980..3130	100	<-	Minus
2R	16085164..16085489	1654..1979	100	<-	Minus
2R	16085564..16085620	1597..1653	100	<-	Minus
2R	16086045..16086293	1348..1596	100	<-	Minus
2R	16088305..16088365	1287..1347	100	<-	Minus
2R	16088452..16088535	1203..1286	100	<-	Minus
2R	16088683..16088825	1060..1202	100	<-	Minus
2R	16088907..16089038	928..1059	100	<-	Minus
2R	16089092..16089286	733..927	100	<-	Minus
2R	16089571..16089892	411..732	100	<-	Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:11:27 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	16083683..16083883	3131..3331	100	<-	Minus
2R	16081176..16083393	3494..5711	99	<-	Minus
2R	16083450..16083611	3332..3493	100	<-	Minus
2R	16098128..16098537	1..410	100		Minus
2R	16083946..16085096	1980..3130	100	<-	Minus
2R	16085164..16085489	1654..1979	100	<-	Minus
2R	16085564..16085620	1597..1653	100	<-	Minus
2R	16086045..16086293	1348..1596	100	<-	Minus
2R	16088305..16088365	1287..1347	100	<-	Minus
2R	16088452..16088535	1203..1286	100	<-	Minus
2R	16088683..16088825	1060..1202	100	<-	Minus
2R	16088907..16089038	928..1059	100	<-	Minus
2R	16089092..16089286	733..927	100	<-	Minus
2R	16089571..16089892	411..732	100	<-	Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:11:27 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	16083683..16083883	3131..3331	100	<-	Minus
2R	16081176..16083393	3494..5711	99	<-	Minus
2R	16083450..16083611	3332..3493	100	<-	Minus
2R	16098128..16098537	1..410	100		Minus
2R	16083946..16085096	1980..3130	100	<-	Minus
2R	16085164..16085489	1654..1979	100	<-	Minus
2R	16085564..16085620	1597..1653	100	<-	Minus
2R	16086045..16086293	1348..1596	100	<-	Minus
2R	16088305..16088365	1287..1347	100	<-	Minus
2R	16088452..16088535	1203..1286	100	<-	Minus
2R	16088683..16088825	1060..1202	100	<-	Minus
2R	16088907..16089038	928..1059	100	<-	Minus
2R	16089092..16089286	733..927	100	<-	Minus
2R	16089571..16089892	411..732	100	<-	Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:43:32 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_2R	11968681..11970898	3494..5711	99	<-	Minus
arm_2R	11970955..11971116	3332..3493	100	<-	Minus
arm_2R	11971188..11971388	3131..3331	100	<-	Minus
arm_2R	11971451..11972601	1980..3130	100	<-	Minus
arm_2R	11972669..11972994	1654..1979	100	<-	Minus
arm_2R	11973069..11973125	1597..1653	100	<-	Minus
arm_2R	11973550..11973798	1348..1596	100	<-	Minus
arm_2R	11975810..11975870	1287..1347	100	<-	Minus
arm_2R	11975957..11976040	1203..1286	100	<-	Minus
arm_2R	11976188..11976330	1060..1202	100	<-	Minus
arm_2R	11976412..11976543	928..1059	100	<-	Minus
arm_2R	11976597..11976791	733..927	100	<-	Minus
arm_2R	11977076..11977397	411..732	100	<-	Minus
arm_2R	11985633..11986042	1..410	100		Minus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:53:12 Download gff for GH09323.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	16082375..16084592	3494..5711	99	<-	Minus
2R	16084649..16084810	3332..3493	100	<-	Minus
2R	16084882..16085082	3131..3331	100	<-	Minus
2R	16099327..16099736	1..410	100		Minus
2R	16085145..16086295	1980..3130	100	<-	Minus
2R	16086363..16086688	1654..1979	100	<-	Minus
2R	16086763..16086819	1597..1653	100	<-	Minus
2R	16087244..16087492	1348..1596	100	<-	Minus
2R	16089504..16089564	1287..1347	100	<-	Minus
2R	16089651..16089734	1203..1286	100	<-	Minus
2R	16089882..16090024	1060..1202	100	<-	Minus
2R	16090106..16090237	928..1059	100	<-	Minus
2R	16090291..16090485	733..927	100	<-	Minus
2R	16090770..16091091	411..732	100	<-	Minus

GH09323.pep Sequence

Translation from 621 to 3614

> GH09323.pep
MRFQWFLSASASLSLFLLLDFVVWIHGERDFNVNDSQVPVIEPKDVPAYK
QDPYVTELMSCQNTPSEIVLSLLLKKHDWSELTATKRAHVQAKLAKFFAI
PKEFISLDSVSKRELRSMHKLAMRKGGKGNKNIETLNRRLGRASFMIGCG
PSYFVMGEPIAKQIAHQMKDGTIGALTEENFGLWFIWRKELKSRSNRKRR
QSEGSGADEDDYDYGDDDEEVAEPSTEVPPVTTHAHRHHHGAPNTVLNEL
ELSTQLPIDDFEGTATATQPTGTATATAIASTAAAAAATAAAATATATTA
NASATTAGESEFHIESTTHRTISSKEGGEPDAISSGNNSLANNELSTPAT
PTSSVATTTASTPESSSISSNFVSTDYMEPQPEENSPPIIKTRLQKLAVT
SGKAFTFHVLPETFYDAEDQGNLRLALTDKDGHELKANSWLQFNADKREL
YGLPLDDTVSRWQYRLSATDSGNASVTETVEISVQQHRAVRTINHEISVF
VRINEKPGHNIDWQLKLINAVARTLDDSTNSAVVVREIRQTPHDPHSATF
VYFNETLPTSECPEKELKDIIARLDANRLSDLVQPQLGIKSITGQLIGSC
QKDLTQVKPTQHMTKNVPPMPRNQVDRVNASLGQLLVYKVPADTFYDAND
NQLTLTLKTRDHLELSPRHWLQFDSKNEEFYGIPKSGDIGSEEYLLVAED
SGGLSAHDALVVVVSPAPKRDFGFFFKAYLSIKHERFNADLQRKFVERVA
KLNGDPTTGQIQIRSITTHHDSDGTIVNFYNTTLYRKHNSCREKEVAMTR
SVYLNSDLSLREAAKRALGPELNLTNFSVVPFSICHHTENIDTNQLDYIP
SRPEEPTHKSSFGEDYMITFVWPIVIIVAMLVAASIIACCLHWCRQRSGK
MELGDEEERKSFRAKGIPVIFQDEYEEKPEIGNKSPVILKDEKPPLLPPS
YNTSNMNGDNDVDDYVPPPSVVVGGREVRGKSPATPSYRKPPPYVSP*

GH09323.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:11:08

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF13572-PA	1205	GF13572-PA	474..1205	243..997	3005	76.3	Plus
Dana\GF13572-PA	1205	GF13572-PA	30..247	25..242	965	83.9	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:11:09

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG22304-PA	1269	GG22304-PA	513..1269	243..997	3596	95	Plus
Dere\GG22304-PA	1269	GG22304-PA	1..242	1..242	1213	97.1	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:11:11

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH19821-PA	1334	GH19821-PA	660..1334	321..997	2643	70.9	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:17:59

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dg-PA	997	CG18250-PA	1..997	1..997	5192	100	Plus
Dg-PD	1262	CG18250-PD	490..1262	225..997	3916	98.1	Plus
Dg-PC	1179	CG18250-PC	406..1179	215..997	3583	89.2	Plus
Dg-PB	914	CG18250-PB	231..914	314..997	3523	98.5	Plus
Dg-PD	1262	CG18250-PD	1..442	1..404	1299	63.7	Plus
Dg-PC	1179	CG18250-PC	1..442	1..404	1299	63.7	Plus
Dg-PB	914	CG18250-PB	1..292	1..282	1295	87	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:11:12

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI20410-PA	1307	GI20410-PA	616..1307	305..997	2695	72.4	Plus
Dmoj\GI20410-PA	1307	GI20410-PA	32..243	28..241	923	78.5	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:11:14

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL17285-PA	1268	GL17285-PA	581..1268	314..997	2839	79.6	Plus
Dper\GL17285-PA	1268	GL17285-PA	27..244	25..242	990	91.3	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:11:15

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA14855-PC	970	GA14855-PC	27..970	25..997	3849	77.4	Plus
Dpse\GA14855-PB	1266	GA14855-PB	579..1266	314..997	2839	79.6	Plus
Dpse\GA14855-PA	1206	GA14855-PA	588..1206	376..997	2811	82.6	Plus
Dpse\GA14855-PD	910	GA14855-PD	292..910	376..997	2799	82.6	Plus
Dpse\GA14855-PB	1266	GA14855-PB	27..244	25..242	1035	90.4	Plus
Dpse\GA14855-PA	1206	GA14855-PA	27..244	25..242	1034	90.4	Plus
Dpse\GA14855-PD	910	GA14855-PD	27..244	25..242	1029	90.4	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:11:16

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM20094-PA	1253	GM20094-PA	504..1253	243..997	3975	98.5	Plus
Dsec\GM20094-PA	1253	GM20094-PA	1..242	1..242	1350	99.6	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:11:17

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD25571-PA	564	GD25571-PA	1..242	1..242	1348	98.8	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:11:19

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ20081-PA	1319	GJ20081-PA	596..1319	243..997	2666	67.8	Plus
Dvir\GJ20081-PA	1319	GJ20081-PA	31..245	26..242	920	80.6	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:11:21

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK23093-PA	1105	GK23093-PA	396..1105	300..997	2490	67	Plus
Dwil\GK23093-PA	1105	GK23093-PA	11..246	14..245	693	59.5	Plus
Dwil\GK19366-PA	151	GK19366-PA	2..100	30..128	344	62.6	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:11:22

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE14101-PA	1260	GE14101-PA	505..1260	243..997	3661	93.3	Plus
Dyak\GE14101-PA	1260	GE14101-PA	1..242	1..242	1219	97.5	Plus

GH09323.hyp Sequence

Translation from 621 to 3614

> GH09323.hyp
MRFQWFLSASASLSLFLLLDFVVWIHGERDFNVNDSQVPVIEPKDVPAYK
QDPYVTELMSCQNTPSEIVLSLLLKKHDWSELTATKRAHVQAKLAKFFAI
PKEFISLDSVSKRELRSMHKLAMRKGGKGNKNIETLNRRLGRASFMIGCG
PSYFVMGEPIAKQIAHQMKDGTIGALTEENFGLWFIWRKELKSRSNRKRR
QSEGSGADEDDYDYGDDDEEVAEPSTEVPPVTTHAHRHHHGAPNTVLNEL
ELSTQLPIDDFEGTATATQPTGTATATAIASTAAAAAATAAAATATATTA
NASATTAGESEFHIESTTHRTISSKEGGEPDAISSGNNSLANNELSTPAT
PTSSVATTTASTPESSSISSNFVSTDYMEPQPEENSPPIIKTRLQKLAVT
SGKAFTFHVLPETFYDAEDQGNLRLALTDKDGHELKANSWLQFNADKREL
YGLPLDDTVSRWQYRLSATDSGNASVTETVEISVQQHRAVRTINHEISVF
VRINEKPGHNIDWQLKLINAVARTLDDSTNSAVVVREIRQTPHDPHSATF
VYFNETLPTSECPEKELKDIIARLDANRLSDLVQPQLGIKSITGQLIGSC
QKDLTQVKPTQHMTKNVPPMPRNQVDRVNASLGQLLVYKVPADTFYDAND
NQLTLTLKTRDHLELSPRHWLQFDSKNEEFYGIPKSGDIGSEEYLLVAED
SGGLSAHDALVVVVSPAPKRDFGFFFKAYLSIKHERFNADLQRKFVERVA
KLNGDPTTGQIQIRSITTHHDSDGTIVNFYNTTLYRKHNSCREKEVAMTR
SVYLNSDLSLREAAKRALGPELNLTNFSVVPFSICHHTENIDTNQLDYIP
SRPEEPTHKSSFGEDYMITFVWPIVIIVAMLVAASIIACCLHWCRQRSGK
MELGDEEERKSFRAKGIPVIFQDEYEEKPEIGNKSPVILKDEKPPLLPPS
YNTSNMNGDNDVDDYVPPPSVVVGGREVRGKSPATPSYRKPPPYVSP*

GH09323.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:45:03

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dg-PA	997	CG18250-PA	1..997	1..997	5192	100	Plus
Dg-PD	1262	CG18250-PD	490..1262	225..997	3916	98.1	Plus
Dg-PC	1179	CG18250-PC	406..1179	215..997	3583	89.2	Plus
Dg-PB	914	CG18250-PB	231..914	314..997	3523	98.5	Plus
Dg-PD	1262	CG18250-PD	1..442	1..404	1299	63.7	Plus
Dg-PC	1179	CG18250-PC	1..442	1..404	1299	63.7	Plus
Dg-PB	914	CG18250-PB	1..292	1..282	1295	87	Plus

Library:	GH
Tissue Source:	Drosophila melanogaster head
Created by:	Ling Hong
Date Registered:	1998-06-02
Comments:	Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:	93
Well:	23
Vector:	pOT2
Associated Gene/Transcript	Dg-RA
Protein status:	GH09323.pep: gold
Preliminary Size:	4600
Sequenced Size:	5729

Clone GH09323 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

GH09323.complete Sequence

GH09323.complete Blast Records

GH09323.complete Sim4 Records

GH09323.pep Sequence

GH09323.pep Blast Records

GH09323.hyp Sequence

GH09323.hyp Blast Records