![]() | BDGP Sequence Production Resources |
Search the DGRC for GH09383
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 93 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | atl-RA |
Protein status: | GH09383.pep: gold |
Preliminary Size: | 2267 |
Sequenced Size: | 2861 |
Gene | Date | Evidence |
---|---|---|
CG6668 | 2001-01-01 | Release 2 assignment |
CG6668 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6668 | 2003-01-15 | Blastp of sequenced clone |
atl | 2008-04-29 | Release 5.5 accounting |
atl | 2008-08-15 | Release 5.9 accounting |
atl | 2008-12-18 | 5.12 accounting |
2861 bp (2861 high quality bases) assembled on 2003-01-15
GenBank Submission: AY069079
> GH09383.complete CAGAGCACAAACAAAATACGTACTTTTCTGCTTCCAAAGTGTCGAAAAAT CGCAGCGCAGTGAAGTCCAGTGTCCGATGTAAATGGTTAAGTAAATTGAC AGGTCGAAATCCAAAAGATTAATAAGAAAGAATTTCCCAACGGAGGCAAA AATAGCCGGTAAAACAGAGACAGCAAACGGAATAGCAGACAAGGATTCCA AACACCATAATGGGCGGATCGGCAGTGCAGGTGATCAACGCCTCCGAGGA GCACACATTTGTGCTCAACGAGGATGCGCTGAGTGAGGTCCTAATGCGGG ATGAGGTCAAGGATCGGTTCGTCTGCGTTGTCTCCGTGGCTGGAGCCTTC CGAAAGGGCAAGAGCTTCCTGCTGGACTTTTTTCTGCGCTATATGTATTC AAAGTATGTGCATCACGATGCGACAGACTGGCTGGGAGGCGAATCAGATC CGCTGGAGGGTTTCTCCTGGCGCGGCGGATCTGAGCGCGACACCACCGGC ATTCTCATGTGGTCCGACATATTCCTGCACGACTATCCCAACGGCGACAA GATAGCCATCATTCTGCTGGACACACAGGGCGCCTTCGACAGCCAGAGCA CGGTGCGCGATTGTGCCACCGTTTTTGCGTTGAGCACAATGCTGTCCTCG GTGCAGATATACAACCTGTCACAGAACATCCAGGAGGACGACCTGCAGCA CCTGCAGCTCTTCACTGAGTATGGTCGCCTCGCGCTGGCCGACACCGGCA AAAAGCCGTTCCAGCGTCTGCAGTTCCTCGTCCGGGACTGGAGCTTTCCC TACGAGGCGGAATATGGTGCACTGGGCGGGGATAAGATTCTGAAACGACG TCTGGAGGTGTCCGACAAACAGCACCCAGAACTACAGTCCCTGCGTCGCC ACATTTCGTCCTGTTTCACGGAGGTGGCCTGCTTCCTGATGCCCCATCCA GGTCTCAATGTGGCCACCAATCCTAAATTTGACGGTCGGCTGCAGGACAT CACGCCCGAGTTTAAGAGTAGCCTGCGCTCCCTGGTGCCCATGCTGCTGG CACCGGACAACCTTGTCTACAAGGAGATCAGCGGACAGCGGGTGCGGGCC CGCGATCTCATCCAGTACTTCCAATCGTACATGAACATCTACAAGGGCAA CGAGCTGCCCGAGCCGAAGAGCATGCTGGTGGCCACCGCAGAGGCTAACC ATTTGACTGCCGTGGCCGCCGCCAAGGAGCTGTACGGACAGCTCATGGAG GAGGTGTGCGGTGGAACGCGGCCGTACTTAAGCACCGCCCATCTCCAGAC GGAGCACCTGCGGGTGAAGGACAAGGCACTGTTCCAGTTCGCCGCCAAGC GCAAGATGGGTGGTGAGGAGTTCACCGAGAAATTCCGCAAGCAACTGGAA GATGATCTTGAGGAGGTCTTCACCAACTACCAAGCACACAACGAGAGCAA GAACATCTTTAAGGCAGCACGGACACCGGCGGTGTACTTCGCCTGCGCCG TCATCATGTACATCCTTAGCGGCATCTTTGGATTGGTGGGTCTCTATACG TTCGCCAACTTCTGCAACCTGGTTATGGGTGTGGCGCTTCTAACGCTGGC TCTGTGGGCCTACATTAGATATAGCGGAGAGCTCAGCGACTTTGGCGGCA AGTTGGATGACTTTGCAACGCTATTGTGGGAGAAATTCATGCGACCCATC TATCACGGCTGCATGGAGAAGGGCATCCACCATGTTGCCACTCATGCGAC CGAAATGGCTGTCGGCGGAGGCGCAGCCTCCTACCGCTCCCAGACCTCGG TGAATGCGTCCAATGGCAAGGTGAAGCGGTCATGAGAATACGCCCAAGGA GCGCAGCACAAAACGCAGCAGCCGGTGCCGTCGCAGCCGCCGTCGGCAAG AACCAATAACAACAACAATAATAATAACAACAACAACAATGTGGCATACA AATCAAACAGGAGCAACAACATTAACGAGGCCGACGGTTTCATTCACAAC ATCTGGCGCAAGTTCGGCGGCAGCAACGAAGAGAAGGGCCAAGTCAGCAC CCAAAGTCCAGCGACCCCGTCCTCTTCCTCCCAGGCGCCAAATAGTCGCA AGAAGCGCAAAGCGAAGCGCAATTAGGTGTCCATGGACCAAGTAGAATGG TTCGATTTTCGAAAGGACGACTCCCCCTCTAATTTGTATAAATCTAAACC CTTCTATAGTGCGTGAGAACCGGAAACACAAACGTCTAGCTATTAATTGC CCTTAAAGGAAGTTGTTTTTATATTGCATTAATTGAAGTGTAGATGGTCT ATATTACGTATATTTAAGAGTAAGTGCATCATTAGTAAGTGGCTCGTGTC TGTTGAAAAGTGAAATTTTAAATTGTTTTTTTACAAACGATATGCGTCTG AAACGGATATATGAAATTTAACGCTGTAATATAAAGAAATCGCTAACGAA TTTAATTTGTTTAATTTCCATCCAAGGCGTACTCCCCCCACCTACCCGCC TCCTTTTCCATCTTATCTCATCTTTGGTATAGAATTCCATAAGCAATCTA TGTATAAACAGAGTGCACATTGTTGTTGGCTGGTTTGCTAAGCGCCTCAT TTTGCCACCTTTTGTTATTTAAAATTATAAAAAAAACAAAAAAACACGAA GAAAATAAAATAGAAGTCATTGCCACCCATTAAAGTTCAACGCGAAGGAG CAATGCTGGTATAGGTCATTAGTTTATCTTGTGCAGTAAAATTTATAGAA CTCTTGGTTTTGTTTCGATTAAACAATAAATGTATTTAATGATAACAGCT CACTAGCAGTTATGGCCATCGAAAAATAAATGGAAAAAACGTAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20455403..20456618 | 403..1618 | 6080 | 100 | Plus |
chr3R | 27901430 | chr3R | 20456806..20457962 | 1686..2842 | 5785 | 100 | Plus |
chr3R | 27901430 | chr3R | 20455031..20455339 | 96..404 | 1545 | 100 | Plus |
chr3R | 27901430 | chr3R | 20448966..20449064 | 1..99 | 480 | 99 | Plus |
chr3R | 27901430 | chr3R | 20456679..20456747 | 1617..1685 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24632155..24633370 | 403..1618 | 6080 | 100 | Plus |
3R | 32079331 | 3R | 24633558..24634715 | 1686..2843 | 5790 | 100 | Plus |
3R | 32079331 | 3R | 24631783..24632091 | 96..404 | 1545 | 100 | Plus |
3R | 32079331 | 3R | 24625718..24625816 | 1..99 | 480 | 99 | Plus |
3R | 32079331 | 3R | 24633431..24633499 | 1617..1685 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24372986..24374201 | 403..1618 | 6080 | 100 | Plus |
3R | 31820162 | 3R | 24374389..24375546 | 1686..2843 | 5790 | 100 | Plus |
3R | 31820162 | 3R | 24372614..24372922 | 96..404 | 1545 | 100 | Plus |
3R | 31820162 | 3R | 24366549..24366647 | 1..99 | 480 | 98.9 | Plus |
3R | 31820162 | 3R | 24374262..24374330 | 1617..1685 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 748..791 | 2627..2669 | 118 | 77.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20448966..20449060 | 1..95 | 100 | -> | Plus |
chr3R | 20455031..20455339 | 96..404 | 100 | -> | Plus |
chr3R | 20455405..20456618 | 405..1618 | 100 | -> | Plus |
chr3R | 20456681..20456747 | 1619..1685 | 100 | -> | Plus |
chr3R | 20456806..20457962 | 1686..2842 | 94 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
atl-RB | 1..1626 | 210..1835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
atl-RB | 1..1626 | 210..1835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
atl-RA | 1..1626 | 210..1835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
atl-RB | 1..1626 | 210..1835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
atl-RA | 1..1626 | 210..1835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
atl-RA | 44..2885 | 1..2842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
atl-RA | 44..2885 | 1..2842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
atl-RA | 48..2889 | 1..2842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
atl-RA | 44..2885 | 1..2842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
atl-RA | 48..2889 | 1..2842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24625718..24625812 | 1..95 | 100 | -> | Plus |
3R | 24631783..24632091 | 96..404 | 100 | -> | Plus |
3R | 24632157..24633370 | 405..1618 | 100 | -> | Plus |
3R | 24633433..24633499 | 1619..1685 | 100 | -> | Plus |
3R | 24633558..24634714 | 1686..2842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24625718..24625812 | 1..95 | 100 | -> | Plus |
3R | 24631783..24632091 | 96..404 | 100 | -> | Plus |
3R | 24632157..24633370 | 405..1618 | 100 | -> | Plus |
3R | 24633433..24633499 | 1619..1685 | 100 | -> | Plus |
3R | 24633558..24634714 | 1686..2842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24625718..24625812 | 1..95 | 100 | -> | Plus |
3R | 24631783..24632091 | 96..404 | 100 | -> | Plus |
3R | 24632157..24633370 | 405..1618 | 100 | -> | Plus |
3R | 24633433..24633499 | 1619..1685 | 100 | -> | Plus |
3R | 24633558..24634714 | 1686..2842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20451440..20451534 | 1..95 | 100 | -> | Plus |
arm_3R | 20457505..20457813 | 96..404 | 100 | -> | Plus |
arm_3R | 20457879..20459092 | 405..1618 | 100 | -> | Plus |
arm_3R | 20459155..20459221 | 1619..1685 | 100 | -> | Plus |
arm_3R | 20459280..20460436 | 1686..2842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24372614..24372922 | 96..404 | 100 | -> | Plus |
3R | 24372988..24374201 | 405..1618 | 100 | -> | Plus |
3R | 24374264..24374330 | 1619..1685 | 100 | -> | Plus |
3R | 24374389..24375545 | 1686..2842 | 100 | Plus | |
3R | 24366549..24366643 | 1..95 | 100 | -> | Plus |
Translation from 209 to 1834
> GH09383.pep MGGSAVQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKG KSFLLDFFLRYMYSKYVHHDATDWLGGESDPLEGFSWRGGSERDTTGILM WSDIFLHDYPNGDKIAIILLDTQGAFDSQSTVRDCATVFALSTMLSSVQI YNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLVRDWSFPYEA EYGALGGDKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMPHPGLN VATNPKFDGRLQDITPEFKSSLRSLVPMLLAPDNLVYKEISGQRVRARDL IQYFQSYMNIYKGNELPEPKSMLVATAEANHLTAVAAAKELYGQLMEEVC GGTRPYLSTAHLQTEHLRVKDKALFQFAAKRKMGGEEFTEKFRKQLEDDL EEVFTNYQAHNESKNIFKAARTPAVYFACAVIMYILSGIFGLVGLYTFAN FCNLVMGVALLTLALWAYIRYSGELSDFGGKLDDFATLLWEKFMRPIYHG CMEKGIHHVATHATEMAVGGGAASYRSQTSVNASNGKVKRS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17217-PA | 622 | GF17217-PA | 1..540 | 1..539 | 2744 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11305-PA | 626 | GG11305-PA | 1..539 | 1..539 | 2902 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18437-PA | 541 | GH18437-PA | 1..541 | 1..541 | 2683 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
atl-PC | 541 | CG6668-PC | 1..541 | 1..541 | 2819 | 100 | Plus |
atl-PB | 541 | CG6668-PB | 1..541 | 1..541 | 2819 | 100 | Plus |
atl-PA | 541 | CG6668-PA | 1..541 | 1..541 | 2819 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24013-PA | 539 | GI24013-PA | 1..539 | 1..541 | 2690 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13613-PA | 542 | GL13613-PA | 1..542 | 1..541 | 2757 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19766-PA | 542 | GA19766-PA | 1..542 | 1..541 | 2757 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26614-PA | 626 | GM26614-PA | 1..539 | 1..539 | 2912 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21113-PA | 465 | GD21113-PA | 1..465 | 1..465 | 2505 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23644-PA | 546 | GJ23644-PA | 6..546 | 1..541 | 2682 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10964-PA | 540 | GK10964-PA | 1..540 | 1..541 | 2691 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23502-PA | 628 | GE23502-PA | 1..539 | 1..539 | 2902 | 98.9 | Plus |
Translation from 209 to 1834
> GH09383.hyp MGGSAVQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKG KSFLLDFFLRYMYSKYVHHDATDWLGGESDPLEGFSWRGGSERDTTGILM WSDIFLHDYPNGDKIAIILLDTQGAFDSQSTVRDCATVFALSTMLSSVQI YNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQRLQFLVRDWSFPYEA EYGALGGDKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMPHPGLN VATNPKFDGRLQDITPEFKSSLRSLVPMLLAPDNLVYKEISGQRVRARDL IQYFQSYMNIYKGNELPEPKSMLVATAEANHLTAVAAAKELYGQLMEEVC GGTRPYLSTAHLQTEHLRVKDKALFQFAAKRKMGGEEFTEKFRKQLEDDL EEVFTNYQAHNESKNIFKAARTPAVYFACAVIMYILSGIFGLVGLYTFAN FCNLVMGVALLTLALWAYIRYSGELSDFGGKLDDFATLLWEKFMRPIYHG CMEKGIHHVATHATEMAVGGGAASYRSQTSVNASNGKVKRS*