Clone GH09387 Report

Search the DGRC for GH09387

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:93
Well:87
Vector:pOT2
Associated Gene/TranscriptCG9314-RA
Protein status:GH09387.pep: gold
Preliminary Size:1834
Sequenced Size:1816

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9314 2001-01-01 Release 2 assignment
CG9314 2001-09-19 Blastp of sequenced clone
CG9314 2003-01-01 Sim4 clustering to Release 3
CG9314 2008-04-29 Release 5.5 accounting
CG9314 2008-08-15 Release 5.9 accounting
CG9314 2008-12-18 5.12 accounting

Clone Sequence Records

GH09387.complete Sequence

1816 bp (1816 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058324

> GH09387.complete
ACAAGCAAAATCACTCACAACGCTTTTGTTAGCAGTTGAAATCAACTGTG
TGAAATATTTTTTTTGAAAATAAATTTTTTTTTAGAAATTTTAAGACCAA
AGACAAAATTGAAAAATGTGTTCACGCGATACGGCGTCAAATCAATTGAT
TGACTATAAGAACAATGACTCCGAGGTGCAAAGGGAGATCACGACATCCA
GTGGAACTCCAGTTGGCGTCAAGGATGCCATACAGACGGTGGGACCAAGG
GGTCCTGCCCTGCTGCAGGATTTCCAGTTCCTCGACGAGGTGATGCACTT
CGACTCGGAGCGGATTCCCGAACGGGTGGCCTACGCCAAGGGAGCCGGCG
CCTTTGGTTACTTCGAGTGCACCCATGACATTTCAAAATTCTGTGCAGCC
TCCATATTCGATAAGGTTAGAAAACGAACTGCCGTCGCGATGAGATTCTC
GGTGGCCTGCGGTGAACAGGGATCTGCGGATACGGTACGTGAACAGCGCG
GATTTGCCGTCAAATTCTACACCGACGACGGCATCTGGGACATTGTGGGT
TGCAACATGCCCGTGCATTATGTCCGGGATCCCATGTTGTTCCCCAGCTT
GGTTCATGCCCAAAAGCGCAATCCCCAGACCCACCTGAAGGATCCGGACA
TGTTCTGGGACTTCATGACCCTGCGTCCGGAAACCCTGCATGCCCTGCTC
ATGTACTTTAGCGATCGGGGAACCCCAGATGGCTATCGCCACCTGCACGG
ATACGGTGTGCACACCTACCGCATGATCAATGCCAGTGGGGAGACGCAAT
ACGTTAGGTTCCACTTCAAGACGGACCAGGGCATCAAGAACCTGGACGCC
CGACGATGCGAGGAGCTGATGTCCCACGATCCGGACTATGCCATCAGGGA
TCTGTACAACTCGATCAAGAAGGGCAACTATCCCAGTTGGTCAATGTACA
TTCAGGTGATGCTCAACGAGGAGGCGAAAAAGTGTCGTTTCAATCCGTTC
GATGTGACCAAGGTATGGCCCCAGAAGGACTTCCCCCTGCTTCCAGTTGG
CAAGATTGTTCTAGATCGCAATCCCACCAACTATTTCACAGAGGTGGAGC
AGCTGGCCTTCAGTCCGGCCCACATGGTGCCGGGCATCGAGCCATCGCCG
GATAAGATGCTCCAGGGTCGCCTCTTCGCCTACGGCGATTCGCAGCGCCA
TCGTTTGGGCGTGAACTACATGCAGATACCGGTGAATTGTCCGTACCGCG
TGAATGTTCGCAACTTCCAGAGGGATGGTGCTATGACAGTGACTGACAAT
CAGAACGGGGCTCCCAACTACTTCCCCAATTCCTTTTGCGGACCAAGGGA
AAGTCCGCGGGCCTTGGGCCTGCAGACGTGCTGTCCGTTGAGCGGAGATG
TCTATCGATTTATGAGCGGTGACACCGAGGACAATTTCAGTCAGGTCACC
GACTTCTGGACCTACACCCTGGATAACTGCGGCCGCAAGCGGCTAGTTCG
CAACTTGTCCGAGCATCTGACCGAAGCTAGCCAGTTCCTTCAGGAGCGGG
CAGTGAAACTGTTCACCATGGTGCACTCCGATTTCGGAAGACTGATGACG
GAGGCCCTTAACACGGCCAGGATTTCCAAGTTCTAGGATGTATTGAGTCA
CTTTTTATAAGACTGTGGGCTGTTGAAATATTTGGCGTATTCTTAAAAAT
TATTATTATTCTTACCAATTATTAATTGGTGTTTAAATCTGGTCTAACGT
TCAAAATGTGCCCCAACTGAAGAAGAGTAAATGAGAAATTTGAAATGTAA
AAAAAAAAAAAAAAAA

GH09387.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:23:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG9314-RA 1991 CG9314-RA 31..1829 1..1799 8995 100 Plus
Cat.a 1829 Cat.a 796..1226 899..1329 715 77.7 Plus
Cat-RA 2126 Cat-RA 1011..1441 899..1329 715 77.7 Plus
Cat.a 1829 Cat.a 487..578 590..681 280 86.9 Plus
Cat-RA 2126 Cat-RA 702..793 590..681 280 86.9 Plus
Cat.a 1829 Cat.a 116..278 219..381 275 77.9 Plus
Cat-RA 2126 Cat-RA 331..493 219..381 275 77.9 Plus
Cat.a 1829 Cat.a 1276..1356 1379..1459 210 83.9 Plus
Cat-RA 2126 Cat-RA 1491..1571 1379..1459 210 83.9 Plus
Cat.a 1829 Cat.a 705..745 808..848 190 97.5 Plus
Cat-RA 2126 Cat-RA 920..960 808..848 190 97.5 Plus
Cat.a 1829 Cat.a 367..437 470..540 145 80.2 Plus
Cat-RA 2126 Cat-RA 582..652 470..540 145 80.2 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:03:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 8704453..8705409 1..957 4785 100 Plus
chr2L 23010047 chr2L 8705469..8706313 954..1798 4150 99.4 Plus
chr3L 24539361 chr3L 18816039..18816903 219..1083 680 71.9 Plus
chr3L 24539361 chr3L 18817009..18817504 1092..1587 575 74.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:40:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:03:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8705580..8706536 1..957 4785 100 Plus
2L 23513712 2L 8706596..8707441 954..1799 4230 100 Plus
3L 28110227 3L 18826384..18827248 219..1083 710 72.1 Plus
3L 28110227 3L 18827354..18827849 1092..1587 575 74.4 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:46:29
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8705580..8706536 1..957 4785 100 Plus
2L 23513712 2L 8706596..8707441 954..1799 4230 100 Plus
3L 28103327 3L 18820454..18820691 1092..1329 425 78.5 Plus
3L 28103327 3L 18819855..18819946 590..681 280 86.9 Plus
3L 28103327 3L 18819484..18819646 219..381 275 77.9 Plus
3L 28103327 3L 18820741..18820821 1379..1459 210 83.9 Plus
3L 28103327 3L 18820256..18820348 991..1083 195 80.6 Plus
3L 28103327 3L 18820073..18820113 808..848 190 97.5 Plus
3L 28103327 3L 18820164..18820248 899..983 170 80 Plus
3L 28103327 3L 18819735..18819805 470..540 145 80.2 Plus
Blast to na_te.dros performed 2019-03-16 10:03:52
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker 7256 Stalker STALKER 7256bp 1614..1689 1747..1678 132 70.1 Minus
Stalker4 7359 Stalker4 STALKER4 7359bp 1721..1795 1747..1678 120 70.1 Minus

GH09387.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:04:54 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 8704453..8705407 1..955 95 -> Plus
chr2L 8705471..8706313 956..1798 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:30:52 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
CG9314-RA 1..1521 116..1636 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:08:47 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
CG9314-RA 1..1521 116..1636 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:55:06 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
CG9314-RA 1..1521 116..1636 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:39:37 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
CG9314-RA 1..1521 116..1636 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:53:35 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
CG9314-RA 1..1521 116..1636 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:59:26 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
CG9314-RA 9..1806 1..1798 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:08:47 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
CG9314-RA 5..1800 1..1798 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:55:06 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
CG9314-RA 9..1806 1..1798 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:39:37 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
CG9314-RA 9..1806 1..1798 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:53:35 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
CG9314-RA 9..1806 1..1798 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:04:54 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8705580..8706534 1..955 100 -> Plus
2L 8706598..8707440 956..1798 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:04:54 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8705580..8706534 1..955 100 -> Plus
2L 8706598..8707440 956..1798 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:04:54 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8705580..8706534 1..955 100 -> Plus
2L 8706598..8707440 956..1798 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:55:06 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8705580..8706534 1..955 100 -> Plus
arm_2L 8706598..8707440 956..1798 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:17:07 Download gff for GH09387.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8705580..8706534 1..955 100 -> Plus
2L 8706598..8707440 956..1798 100   Plus

GH09387.hyp Sequence

Translation from 115 to 1635

> GH09387.hyp
MCSRDTASNQLIDYKNNDSEVQREITTSSGTPVGVKDAIQTVGPRGPALL
QDFQFLDEVMHFDSERIPERVAYAKGAGAFGYFECTHDISKFCAASIFDK
VRKRTAVAMRFSVACGEQGSADTVREQRGFAVKFYTDDGIWDIVGCNMPV
HYVRDPMLFPSLVHAQKRNPQTHLKDPDMFWDFMTLRPETLHALLMYFSD
RGTPDGYRHLHGYGVHTYRMINASGETQYVRFHFKTDQGIKNLDARRCEE
LMSHDPDYAIRDLYNSIKKGNYPSWSMYIQVMLNEEAKKCRFNPFDVTKV
WPQKDFPLLPVGKIVLDRNPTNYFTEVEQLAFSPAHMVPGIEPSPDKMLQ
GRLFAYGDSQRHRLGVNYMQIPVNCPYRVNVRNFQRDGAMTVTDNQNGAP
NYFPNSFCGPRESPRALGLQTCCPLSGDVYRFMSGDTEDNFSQVTDFWTY
TLDNCGRKRLVRNLSEHLTEASQFLQERAVKLFTMVHSDFGRLMTEALNT
ARISKF*

GH09387.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:46:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG9314-PC 506 CG9314-PC 1..506 1..506 2735 100 Plus
CG9314-PA 506 CG9314-PA 1..506 1..506 2735 100 Plus
Cat-PA 506 CG6871-PA 1..506 1..506 2025 70.4 Plus

GH09387.pep Sequence

Translation from 115 to 1635

> GH09387.pep
MCSRDTASNQLIDYKNNDSEVQREITTSSGTPVGVKDAIQTVGPRGPALL
QDFQFLDEVMHFDSERIPERVAYAKGAGAFGYFECTHDISKFCAASIFDK
VRKRTAVAMRFSVACGEQGSADTVREQRGFAVKFYTDDGIWDIVGCNMPV
HYVRDPMLFPSLVHAQKRNPQTHLKDPDMFWDFMTLRPETLHALLMYFSD
RGTPDGYRHLHGYGVHTYRMINASGETQYVRFHFKTDQGIKNLDARRCEE
LMSHDPDYAIRDLYNSIKKGNYPSWSMYIQVMLNEEAKKCRFNPFDVTKV
WPQKDFPLLPVGKIVLDRNPTNYFTEVEQLAFSPAHMVPGIEPSPDKMLQ
GRLFAYGDSQRHRLGVNYMQIPVNCPYRVNVRNFQRDGAMTVTDNQNGAP
NYFPNSFCGPRESPRALGLQTCCPLSGDVYRFMSGDTEDNFSQVTDFWTY
TLDNCGRKRLVRNLSEHLTEASQFLQERAVKLFTMVHSDFGRLMTEALNT
ARISKF*

GH09387.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:31:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15540-PA 506 GF15540-PA 1..506 1..506 2585 90.9 Plus
Dana\GF23641-PA 506 GF23641-PA 1..506 1..506 2051 70 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:31:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25301-PA 506 GG25301-PA 1..506 1..506 2723 98 Plus
Dere\GG13679-PA 506 GG13679-PA 1..506 1..506 2029 69.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:31:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13231-PA 506 GH13231-PA 1..506 1..506 2482 86.4 Plus
Dgri\GH14374-PA 506 GH14374-PA 1..506 1..506 2055 70.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG9314-PC 506 CG9314-PC 1..506 1..506 2735 100 Plus
CG9314-PA 506 CG9314-PA 1..506 1..506 2735 100 Plus
Cat-PA 506 CG6871-PA 1..506 1..506 2025 70.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:31:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12408-PA 506 GI12408-PA 1..506 1..506 2498 87.2 Plus
Dmoj\GI11318-PA 506 GI11318-PA 1..506 1..506 2027 69.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:31:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25560-PA 506 GL25560-PA 1..506 1..506 2563 90.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:31:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21693-PA 506 GA21693-PA 1..506 1..506 2563 90.1 Plus
Dpse\GA19920-PA 506 GA19920-PA 1..506 1..506 2066 71.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:31:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17118-PA 506 GM17118-PA 1..506 1..506 2758 99.6 Plus
Dsec\Cat-PA 506 GM14993-PA 1..506 1..506 2043 69.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:31:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23560-PA 506 GD23560-PA 1..506 1..506 2758 99.6 Plus
Dsim\Cat-PA 506 GD14770-PA 1..506 1..506 2046 69.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:31:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17881-PA 506 GJ17881-PA 1..506 1..506 2512 87.5 Plus
Dvir\GJ11574-PA 506 GJ11574-PA 1..506 1..506 2017 69 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18754-PA 506 GK18754-PA 1..506 1..506 2522 88.7 Plus
Dwil\GK12121-PA 506 GK12121-PA 1..506 1..506 2071 71.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18791-PA 506 GE18791-PA 1..506 1..506 2726 98 Plus
Dyak\GE19975-PA 506 GE19975-PA 1..506 1..506 2028 69.4 Plus