BDGP Sequence Production Resources |
Search the DGRC for GH09478
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 94 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4891-RA |
Protein status: | GH09478.pep: gold |
Preliminary Size: | 1046 |
Sequenced Size: | 951 |
Gene | Date | Evidence |
---|---|---|
CG4891 | 2001-01-01 | Release 2 assignment |
CG4891 | 2001-10-10 | Blastp of sequenced clone |
CG4891 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4891 | 2008-04-29 | Release 5.5 accounting |
CG4891 | 2008-08-15 | Release 5.9 accounting |
CG4891 | 2008-12-18 | 5.12 accounting |
951 bp (951 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060668
> GH09478.complete CTACATACAAATAATCAAGAATTATGAGAGAAAAGTGGAAAGCTCTGTTG CTATTGCTTCAGCTGCTTGCTCATTTGGAATCGGGTCAAGCTATTTGGTT TCCCTGGTACTTTCAGCGCTACGGACTAGCCCCACATTCATCCCGCCATG GCGGAGGTCATAAGAACAACACAGACCCCGGGTCAACCTGCCCACCAGGC TACGAAATAAAGGCATCAGTGGCAGGATTGTCTGGCGGAACGGCCGGATG TGAACGCGTAGTTGGATCGAAAGCAGGACGCCTTTGCGACGATAATCCCG TGTTGATGCAACTGGCGCGTCTCTATGTGGTGAGTCCTGAGAGGATTGTC CTGCTCCTGGCGCAGCCATCACTAACCGAGTCCTGCGCCGAGATCACCGA TGTGCTGGACAATATTCGGAACTCCATGCGCAATTGTGTCTTGGCACCGG ATAACATATACGGAAGACTAGCTGATGGACTGAGCTACTTCCAATCGGAG GTCTGCGTTGGTGGCGATGGCAGCAACAGGAAGCGATGCACTGGACTCCA GGAGTCGCACAACTGCCTCAAGGAACTCCGGACGGACATGATCGAGTGCG AGGCACCGGCTGATTGGTACGAACGCAGGAATGCCAGCAAGGTGTGCCAC ATATTCAACGATGTTCTCGACTGTTACTATACGAGGGCAGCCTTGTTGTG CGGACTTGAGGTTGCCAGGCAACTAAGGTCCTTCGCAGGCGACAGCATGG GCAGAGCCATGATCCACAAGTGCGAGGTCAGCAAAAGGCTACCCCGGGTT GATAATGCCATGCCCGTCAACGCAAGTAGTGGGGCTAGCTTAAGGTCATC ATGGTTAGGTGCACTTATTTCATGGATTTTCGTTATTTATTTTTCAGACA TTAAATATATTTTTGGATTATTGGTATATTAAAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4891-RA | 936 | CG4891-RA | 5..936 | 1..932 | 4660 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 16093783..16094712 | 1..930 | 4650 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16095013..16095951 | 1..939 | 4680 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16095013..16095951 | 1..939 | 4680 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 1553..1591 | 38..78 | 119 | 80.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 16093783..16094712 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4891-RA | 1..907 | 24..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4891-RA | 1..907 | 24..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4891-RA | 1..909 | 24..932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4891-RA | 1..907 | 24..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4891-RA | 1..909 | 24..932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4891-RA | 5..934 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4891-RA | 5..934 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4891-RA | 17..946 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4891-RA | 5..934 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4891-RA | 17..946 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16095013..16095942 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16095013..16095942 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16095013..16095942 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 16095013..16095942 | 1..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16095013..16095942 | 1..930 | 100 | Plus |
Translation from 23 to 931
> GH09478.pep MREKWKALLLLLQLLAHLESGQAIWFPWYFQRYGLAPHSSRHGGGHKNNT DPGSTCPPGYEIKASVAGLSGGTAGCERVVGSKAGRLCDDNPVLMQLARL YVVSPERIVLLLAQPSLTESCAEITDVLDNIRNSMRNCVLAPDNIYGRLA DGLSYFQSEVCVGGDGSNRKRCTGLQESHNCLKELRTDMIECEAPADWYE RRNASKVCHIFNDVLDCYYTRAALLCGLEVARQLRSFAGDSMGRAMIHKC EVSKRLPRVDNAMPVNASSGASLRSSWLGALISWIFVIYFSDIKYIFGLL VY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14937-PA | 294 | GF14937-PA | 9..283 | 8..274 | 958 | 64.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25190-PA | 300 | GG25190-PA | 1..300 | 1..298 | 1344 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10396-PA | 281 | GH10396-PA | 9..273 | 13..264 | 809 | 59 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4891-PA | 302 | CG4891-PA | 1..302 | 1..302 | 1608 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17375-PA | 278 | GI17375-PA | 5..276 | 5..251 | 776 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21041-PA | 303 | GL21041-PA | 11..298 | 10..287 | 875 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18505-PA | 303 | GA18505-PA | 11..298 | 10..287 | 885 | 59.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18653-PA | 273 | GM18653-PA | 7..273 | 30..297 | 1266 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24039-PA | 273 | GD24039-PA | 7..273 | 30..297 | 1266 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18053-PA | 313 | GJ18053-PA | 24..296 | 20..273 | 838 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18899-PA | 302 | GK18899-PA | 10..300 | 14..290 | 864 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21321-PA | 303 | GE21321-PA | 1..303 | 1..298 | 1337 | 86.5 | Plus |
Translation from 23 to 929
> GH09478.hyp MREKWKALLLLLQLLAHLESGQAIWFPWYFQRYGLAPHSSRHGGGHKNNT DPGSTCPPGYEIKASVAGLSGGTAGCERVVGSKAGRLCDDNPVLMQLARL YVVSPERIVLLLAQPSLTESCAEITDVLDNIRNSMRNCVLAPDNIYGRLA DGLSYFQSEVCVGGDGSNRKRCTGLQESHNCLKELRTDMIECEAPADWYE RRNASKVCHIFNDVLDCYYTRAALLCGLEVARQLRSFAGDSMGRAMIHKC EVSKRLPRVDNAMPVNASSGASLRSSWLGALISWIFVIYFSDIKYIFGLL VY
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4891-PA | 302 | CG4891-PA | 1..302 | 1..302 | 1608 | 100 | Plus |