Clone GH09510 Report

Search the DGRC for GH09510

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:95
Well:10
Vector:pOT2
Associated Gene/TranscriptCG32354-RA
Protein status:GH09510.pep: gold
Preliminary Size:2281
Sequenced Size:2345

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7027 2001-01-01 Release 2 assignment
CG7159 2001-01-01 Release 2 assignment
CG32354 2001-09-19 Blastp of sequenced clone
CG32354 2003-01-01 Sim4 clustering to Release 3
CG32354 2008-04-29 Release 5.5 accounting
CG32354 2008-08-15 Release 5.9 accounting
CG32354 2008-12-18 5.12 accounting

Clone Sequence Records

GH09510.complete Sequence

2345 bp (2345 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058325

> GH09510.complete
TATCTCCCTGGTAGATCGACCGAGGAAGAGAAAAAAAAACTTTCATCCAC
CGTGAGCCGCAGCCGCATAAAAGTTTGCTACTATTTCAATTTCAATTGTT
AACGAGCGAAAGCGCCGCACGCCTCAGTCTCACATCACGCACGCATCCGA
TCCGAGCGGCAACAACAAATCATCAAGCGTCTAATAGGAAAAGTGCAGCA
GACAGCCAGCGAAAATGCACCACAAACAGCATCTGCATCTGCATCTGCAG
CCCCCCGCCCCAAACGCCACCCAAACACAGGCCCACGGACTTGGCCAGAC
TCCAAGCCAGATCGCCAGATGCAGCCATAACCACAGCCCCAGTCTGGGCC
TCAGCTTTGGCGGCACCAAGAGCCAGCGACAGCTGTTTGGCGCACTCTTG
GCCATGTTCACGTTGGCGGCATTTGCGTCAACCACCAGTGGCGCTGTGAC
AGACTCACCCATCAAGATTATCCGGCTGCCGGCGCAGGCGCCAGTTATCC
GCTATCGCAGTGCAGATGCGGCGCCCAACTCATTGCTGATCAACTATCGT
CAGGATGCGCGACCGGAGCTGTCGTCCACATTGATGCAGGCACCCGGAGC
GGCGGCAGCTGCCTTGGAGTCGCTGCTGCGCGAGGAGACGGAGCAACAGC
AGCTGTCACAGATGGGCAGACGGAATAGGGCTAGTAACACCGGCACCGGC
AACTGTCCTCGATCCTGTCCACCGAGCATCACCGTGGGAGCTGAGCCCGT
GTGCGGCAGCGATGGTCTGATCTATGCGAATATCTGCGAGCTGCGCAAGA
AGACTTGCTCCCGCAGTGGAGTGTCGCTGATCAAGGACGTGCGGGATGGC
TGCGAGAGGTCGAAGGGTTCGGACTGCAAGCACCGCTGCAGCACGGAGAA
GGATCCAGTGTGTGGTACAGACGGAAGGACCTATCTGAATCGCTGCATGC
TGAGGGTGCAATCGTGTCGCGTGGGATTGGCTGCAGTGAAGCTATCGCAT
GTGGGTCCCTGCAGCAACACGAGTGCCGTGCGTGAGTCCTGTCCGGTTGA
CTGCAACAGTGCGCCGAAGGATGGACCAGTTTGCTCATCGGATGGCAATG
TATACAACTCCACGTGCGAGATGAAGCTGAAGACGTGTGGACAGGGTGTG
GTGAAAACCAGCCGGAAGCACTGTCAGTCCACACGAATGTGCAGGGAATC
CTGCTGGCGTGTGGCGAGGCCCACTTGCGGATCAGATGGCAGACTGTATG
CCAGTCCGTGCAAGATGCGCTCTTCCAATTGCGGCAAGCACGTCTTTGAG
GTTCCCTTATCCTACTGCATGTCGCAGGAGAGGCACGGAGCCTCCGATGC
CTGTCCCACGGAGTGTCCCAAATCGGATACGGATTCCTCGTCGCAGTACG
TGTGCGGCAGTGATGGCAACATATACTCTTCGCTGTGTGAACTCAAAATG
CTCAATTGCGGTCCACAGCGCAAGTCCATTCAAAAAGTGAGCATGGACAA
GTGCAAGAATCGACTGACCCGCTGCAAACAGCTGCCTCCTTGCAAGGACT
TCAATAGCTTGTTCGGTTCCATCTTCAGCTCGAAGCGAAATGACAAGCTC
TGCGGCACGGACGCCAAGACTTATAACAATGAGTGCGAACTGGCCCACGC
CACCTGCCTACGCGGCGTGAATCTGGCCCACATTGGTCCCTGCACGGATC
TCAATTCGCCCACCAAGGATTGCGGGGATGCCTGTACTCGGGCGGATCTG
GAACAGCAGCCAGTGTGCGGCTCGGATGGCAACACCTTCGCCTCCATGTG
CGAGTTCAAGCGGCGCACTTGCGATCTGCGTGTGGTGCCCGTTTCGCTAA
AGAATTGCGCTTTAACCGCCGACTGCGAATCGGATTGTGATGCCCAGCCG
CCAAGTTTCGTCTGCGGATCGGACAACAACTTGTACAAGTCCGAGTGCCA
CATGCGCAAGGAGAATTGTGGCAAGCATGTTTTCGTGGTGCCACTGAAGC
GCTGCCTTGCCGCCTTTCAGCTTAAAGGATGTGCCCGCATCTGTCCCAGG
GAATTCGAGCCTGTTTGCGGCAGCGACAATAAAACGTATCTGAACGACTG
CTTCCTGGAGATCGAAAACTGCAGGGCGAACCAGACGGTGAACGTCAACT
ACTACGGCGCCTGTGGCCGCCCCGAAGCACCATCCACTAACTTCCTTTAC
TAGGACGTATGTATGCGTGGCGTCTTCATTTCACTTGGCATTTAATATTT
GTAGGCTATAGTCTTGTATTGTACTTTTTTTAAAACGATATTTATTGAGT
TTGAATTAAAGCCCCCCAACGAACTTAAAAAAAAAAAAAAAAAAA

GH09510.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:23:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG32354.d 3353 CG32354.d 970..3296 1..2327 11635 100 Plus
CG32354-RA 2384 CG32354-RA 1..2327 1..2327 11635 100 Plus
CG32354.b 3309 CG32354.b 926..3252 1..2327 11635 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:15:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 8408839..8409860 1461..440 4975 99.1 Minus
chr3L 24539361 chr3L 8407857..8408523 2326..1660 3335 100 Minus
chr3L 24539361 chr3L 8412832..8413272 441..1 2190 99.8 Minus
chr3L 24539361 chr3L 8408585..8408783 1659..1461 995 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:40:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:15:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8416839..8417860 1461..440 5110 100 Minus
3L 28110227 3L 8415856..8416523 2327..1660 3340 100 Minus
3L 28110227 3L 8420840..8421280 441..1 2205 100 Minus
3L 28110227 3L 8416585..8416783 1659..1461 995 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:46:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 8409939..8410960 1461..440 5110 100 Minus
3L 28103327 3L 8408956..8409623 2327..1660 3340 100 Minus
3L 28103327 3L 8413940..8414380 441..1 2205 100 Minus
3L 28103327 3L 8409685..8409883 1659..1461 995 100 Minus
Blast to na_te.dros performed on 2019-03-16 02:15:07 has no hits.

GH09510.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:16:09 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 8407857..8408523 1660..2326 100 <- Minus
chr3L 8408585..8408782 1462..1659 100 <- Minus
chr3L 8408839..8409859 441..1461 99 <- Minus
chr3L 8412833..8413272 1..440 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:31:05 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
CG32354-RA 1..1989 215..2203 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:08:49 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
CG32354-RA 1..1989 215..2203 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:17:48 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
CG32354-RA 1..1989 215..2203 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:39:38 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
CG32354-RA 1..1989 215..2203 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:02:13 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
CG32354-RA 1..1989 215..2203 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:59:28 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
CG32354-RA 1..2326 1..2326 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:08:49 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
CG32354-RA 1..2326 1..2326 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:17:48 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
CG32354-RA 926..3251 1..2326 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:39:38 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
CG32354-RA 1..2326 1..2326 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:02:13 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
CG32354-RA 926..3251 1..2326 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:16:09 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8415857..8416523 1660..2326 100 <- Minus
3L 8416585..8416782 1462..1659 100 <- Minus
3L 8416839..8417859 441..1461 100 <- Minus
3L 8420841..8421280 1..440 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:16:09 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8415857..8416523 1660..2326 100 <- Minus
3L 8416585..8416782 1462..1659 100 <- Minus
3L 8416839..8417859 441..1461 100 <- Minus
3L 8420841..8421280 1..440 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:16:09 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8415857..8416523 1660..2326 100 <- Minus
3L 8416585..8416782 1462..1659 100 <- Minus
3L 8416839..8417859 441..1461 100 <- Minus
3L 8420841..8421280 1..440 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:17:48 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8408957..8409623 1660..2326 100 <- Minus
arm_3L 8409685..8409882 1462..1659 100 <- Minus
arm_3L 8409939..8410959 441..1461 100 <- Minus
arm_3L 8413941..8414380 1..440 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:17:08 Download gff for GH09510.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8408957..8409623 1660..2326 100 <- Minus
3L 8409685..8409882 1462..1659 100 <- Minus
3L 8409939..8410959 441..1461 100 <- Minus
3L 8413941..8414380 1..440 100   Minus

GH09510.hyp Sequence

Translation from 214 to 2202

> GH09510.hyp
MHHKQHLHLHLQPPAPNATQTQAHGLGQTPSQIARCSHNHSPSLGLSFGG
TKSQRQLFGALLAMFTLAAFASTTSGAVTDSPIKIIRLPAQAPVIRYRSA
DAAPNSLLINYRQDARPELSSTLMQAPGAAAAALESLLREETEQQQLSQM
GRRNRASNTGTGNCPRSCPPSITVGAEPVCGSDGLIYANICELRKKTCSR
SGVSLIKDVRDGCERSKGSDCKHRCSTEKDPVCGTDGRTYLNRCMLRVQS
CRVGLAAVKLSHVGPCSNTSAVRESCPVDCNSAPKDGPVCSSDGNVYNST
CEMKLKTCGQGVVKTSRKHCQSTRMCRESCWRVARPTCGSDGRLYASPCK
MRSSNCGKHVFEVPLSYCMSQERHGASDACPTECPKSDTDSSSQYVCGSD
GNIYSSLCELKMLNCGPQRKSIQKVSMDKCKNRLTRCKQLPPCKDFNSLF
GSIFSSKRNDKLCGTDAKTYNNECELAHATCLRGVNLAHIGPCTDLNSPT
KDCGDACTRADLEQQPVCGSDGNTFASMCEFKRRTCDLRVVPVSLKNCAL
TADCESDCDAQPPSFVCGSDNNLYKSECHMRKENCGKHVFVVPLKRCLAA
FQLKGCARICPREFEPVCGSDNKTYLNDCFLEIENCRANQTVNVNYYGAC
GRPEAPSTNFLY*

GH09510.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:46:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32354-PA 662 CG32354-PA 1..662 1..662 3607 100 Plus

GH09510.pep Sequence

Translation from 214 to 2202

> GH09510.pep
MHHKQHLHLHLQPPAPNATQTQAHGLGQTPSQIARCSHNHSPSLGLSFGG
TKSQRQLFGALLAMFTLAAFASTTSGAVTDSPIKIIRLPAQAPVIRYRSA
DAAPNSLLINYRQDARPELSSTLMQAPGAAAAALESLLREETEQQQLSQM
GRRNRASNTGTGNCPRSCPPSITVGAEPVCGSDGLIYANICELRKKTCSR
SGVSLIKDVRDGCERSKGSDCKHRCSTEKDPVCGTDGRTYLNRCMLRVQS
CRVGLAAVKLSHVGPCSNTSAVRESCPVDCNSAPKDGPVCSSDGNVYNST
CEMKLKTCGQGVVKTSRKHCQSTRMCRESCWRVARPTCGSDGRLYASPCK
MRSSNCGKHVFEVPLSYCMSQERHGASDACPTECPKSDTDSSSQYVCGSD
GNIYSSLCELKMLNCGPQRKSIQKVSMDKCKNRLTRCKQLPPCKDFNSLF
GSIFSSKRNDKLCGTDAKTYNNECELAHATCLRGVNLAHIGPCTDLNSPT
KDCGDACTRADLEQQPVCGSDGNTFASMCEFKRRTCDLRVVPVSLKNCAL
TADCESDCDAQPPSFVCGSDNNLYKSECHMRKENCGKHVFVVPLKRCLAA
FQLKGCARICPREFEPVCGSDNKTYLNDCFLEIENCRANQTVNVNYYGAC
GRPEAPSTNFLY*

GH09510.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:31:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10108-PA 663 GF10108-PA 38..663 28..662 3055 92.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15083-PA 660 GG15083-PA 1..660 1..662 3424 97.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:31:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16407-PA 637 GH16407-PA 21..637 50..662 2859 87.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG32354-PA 662 CG32354-PA 1..662 1..662 3607 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:31:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12488-PA 623 GI12488-PA 12..623 52..662 2837 89.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:31:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24572-PA 637 GL24572-PA 31..637 54..662 2831 90 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:31:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16844-PA 639 GA16844-PA 33..639 54..662 2831 90 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:31:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24939-PA 662 GM24939-PA 1..662 1..662 3475 98.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:31:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12990-PA 76 GD12990-PA 13..75 13..75 304 95.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:31:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12392-PA 627 GJ12392-PA 12..627 52..662 2846 88.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:31:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17753-PA 643 GK17753-PA 24..643 54..662 2734 84.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:31:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21306-PA 660 GE21306-PA 1..660 1..662 3401 96.8 Plus