BDGP Sequence Production Resources |
Search the DGRC for GH09623
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 96 |
Well: | 23 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6330-RA |
Protein status: | GH09623.pep: gold |
Preliminary Size: | 1166 |
Sequenced Size: | 1540 |
Gene | Date | Evidence |
---|---|---|
CG6330 | 2001-01-01 | Release 2 assignment |
CG6330 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6330 | 2003-02-24 | Blastp of sequenced clone |
CG6330 | 2008-04-29 | Release 5.5 accounting |
CG6330 | 2008-08-15 | Release 5.9 accounting |
CG6330 | 2008-12-18 | 5.12 accounting |
1540 bp (1540 high quality bases) assembled on 2003-02-24
GenBank Submission: BT004884
> GH09623.complete CGTTGACGTGTCTACACGAGTAACTAGTTTTGTTTTGGCTCGCTGGCTGC TCCTTCGTCTGGTAGTTGGTAGTTCGTTTGTGAGTTAAAGGACATTCGAG AGGTGACATCATGCCGCCCACCATAACCGATAATCAGACGCACGACTTTA AGGCCCACTACGATTGCGCCCACAGGTCCTCGCTGCAGGACGACGAGACG GACGATGCGTACGTGAAAAGGATAACGCGGTACTCCGATGGAACCGTCAA ATTGCGCAACTCGAACATTGAGCTCATGGACCAGGATATCCTCTATCACC TGGCCTTGGGCAGCGAGAGCCACGACCTGCAGGAGATGTTTGGCGACGTT AAGTTCGTTTGCATGGGCGGCACACCAAAGCGCATGGAGAATTTTGCCCA TTTCATAATGAACGAGATTGGCTACAAGTTGCCAGCGGGCACCCAGCTGC AGGACATCAGCGCCTATTCGTATCGCTACTCCATGTACAAAGTGGGACCG GTGCTGTGCGTCAGCCATGGCATGGGTACGCCCTCGGTCAGCATCCTGAT GCATGAGATGATCAAGCTGATGTACCACGCCAAGTGCAAGGATCCCGTCT TCATCAGGATAGGAACGTGCGGAGGAATTGGCGTCGACGGCGGCACCGTC ATCATCACCGAAGATGCCCTCGATGGGCAGCTGAGGAACTCCCATGAGTT TACCATTCTCGGCAAGACCATCCATCGTCCTGCCAAGCTGGACAAAAAGC TGGCCCGTGAGCTAAAGTCCCTGGCCAGTCCCGATGATCCGTACGATACC ATTATTGGCAAGACGCTGTGCACCAACGATTTCTACGAGGGCCAGGGTCG TTTGGACGGCGCATTCTGTGATTTCAGCGAGAACGAGAAGATGGCCTATC TGGAGAAGCTGCGCGAGAACGGCGTGGTCAACATCGAGATGGAGAGCACC ATCTTTGCGGCCCTGACCCACCATGCCGGCATCAAGGCAGCGGTGGTGTG TGTCGCCCTGCTGAACCGCCTCAATGGGGATCAGGTCAACGCGCCCAAGG AGGTCATGAACGAGTGGCAAGCGCGTCCGCAGATCCTCGTGTCGCGCTAT ATTCGCAAGGTCCTTACGCACAATGGACAGCTGAAGGCGCTATTCGGACA CCAGGGATCCATCAAGTCACCCCGGCGCTTCAAGCTCGTCCAGCAGGAGT CTCAGGCCCACGAGTAAATGGGATCATGTGACCAGTTCCATCTCATTTCA CCTTCTTACATTATATGTGCGCATCTCTCCAGTATACAATGATGTTTCAA CATTCCCTAGTTTAGCTCTGATTAAGTTCCTAGCTTTATTTCTGTGTATA TCGCCCACAACCTCATCGGATAATTTAAAACCGATCATATTGTACGTGCA TATGTTCATATGTTACCACAATTTAATATATATATGTATATCAATAATAT ATAAAAATAGTATCACTGAGTGTGACGTTCAAAGGTTATCAGAAATAAAC GCTTTTGAGATCACAAAACAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 22773161..22773607 | 1519..1073 | 2235 | 100 | Minus |
chr3R | 27901430 | chr3R | 22773676..22774047 | 1073..702 | 1815 | 99.2 | Minus |
chr3R | 27901430 | chr3R | 22774110..22774466 | 701..345 | 1725 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 22776038..22776269 | 232..1 | 1160 | 100 | Minus |
chr3R | 27901430 | chr3R | 22774813..22774937 | 353..229 | 625 | 100 | Minus |
chr2R | 21145070 | chr2R | 18819267..18819443 | 655..479 | 360 | 80.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 26950120..26950569 | 1522..1073 | 2250 | 100 | Minus |
3R | 32079331 | 3R | 26950638..26951009 | 1073..702 | 1860 | 100 | Minus |
3R | 32079331 | 3R | 26951072..26951428 | 701..345 | 1755 | 99.4 | Minus |
3R | 32079331 | 3R | 26953001..26953232 | 232..1 | 1160 | 100 | Minus |
3R | 32079331 | 3R | 26951775..26951899 | 353..229 | 625 | 100 | Minus |
2R | 25286936 | 2R | 22932746..22932922 | 655..479 | 345 | 79.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 26690951..26691400 | 1522..1073 | 2250 | 100 | Minus |
3R | 31820162 | 3R | 26691469..26691840 | 1073..702 | 1860 | 100 | Minus |
3R | 31820162 | 3R | 26691903..26692259 | 701..345 | 1755 | 99.4 | Minus |
3R | 31820162 | 3R | 26693832..26694063 | 232..1 | 1160 | 100 | Minus |
3R | 31820162 | 3R | 26692606..26692730 | 353..229 | 625 | 100 | Minus |
2R | 25260384 | 2R | 22933945..22934121 | 655..479 | 345 | 79.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 22773161..22773606 | 1074..1519 | 100 | <- | Minus |
chr3R | 22773676..22774047 | 702..1073 | 99 | <- | Minus |
chr3R | 22774110..22774457 | 354..701 | 99 | <- | Minus |
chr3R | 22774813..22774936 | 230..353 | 100 | <- | Minus |
chr3R | 22776041..22776269 | 1..229 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6330-RA | 1..1107 | 111..1217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6330-RA | 1..1107 | 111..1217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6330-RA | 1..1107 | 111..1217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6330-RA | 1..1107 | 111..1217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6330-RA | 1..1107 | 111..1217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6330-RA | 21..1539 | 1..1519 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6330-RA | 21..1539 | 1..1519 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6330-RA | 23..1541 | 1..1519 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6330-RA | 21..1539 | 1..1519 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6330-RA | 23..1541 | 1..1519 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26953004..26953232 | 1..229 | 100 | Minus | |
3R | 26950123..26950568 | 1074..1519 | 100 | <- | Minus |
3R | 26950638..26951009 | 702..1073 | 100 | <- | Minus |
3R | 26951072..26951419 | 354..701 | 100 | <- | Minus |
3R | 26951775..26951898 | 230..353 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26953004..26953232 | 1..229 | 100 | Minus | |
3R | 26950123..26950568 | 1074..1519 | 100 | <- | Minus |
3R | 26950638..26951009 | 702..1073 | 100 | <- | Minus |
3R | 26951072..26951419 | 354..701 | 100 | <- | Minus |
3R | 26951775..26951898 | 230..353 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26953004..26953232 | 1..229 | 100 | Minus | |
3R | 26950123..26950568 | 1074..1519 | 100 | <- | Minus |
3R | 26950638..26951009 | 702..1073 | 100 | <- | Minus |
3R | 26951072..26951419 | 354..701 | 100 | <- | Minus |
3R | 26951775..26951898 | 230..353 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 22775845..22776290 | 1074..1519 | 100 | <- | Minus |
arm_3R | 22776360..22776731 | 702..1073 | 100 | <- | Minus |
arm_3R | 22776794..22777141 | 354..701 | 100 | <- | Minus |
arm_3R | 22777497..22777620 | 230..353 | 100 | <- | Minus |
arm_3R | 22778726..22778954 | 1..229 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26691469..26691840 | 702..1073 | 100 | <- | Minus |
3R | 26690954..26691399 | 1074..1519 | 100 | <- | Minus |
3R | 26691903..26692250 | 354..701 | 100 | <- | Minus |
3R | 26692606..26692729 | 230..353 | 100 | <- | Minus |
3R | 26693835..26694063 | 1..229 | 100 | Minus |
Translation from 110 to 1216
> GH09623.pep MPPTITDNQTHDFKAHYDCAHRSSLQDDETDDAYVKRITRYSDGTVKLRN SNIELMDQDILYHLALGSESHDLQEMFGDVKFVCMGGTPKRMENFAHFIM NEIGYKLPAGTQLQDISAYSYRYSMYKVGPVLCVSHGMGTPSVSILMHEM IKLMYHAKCKDPVFIRIGTCGGIGVDGGTVIITEDALDGQLRNSHEFTIL GKTIHRPAKLDKKLARELKSLASPDDPYDTIIGKTLCTNDFYEGQGRLDG AFCDFSENEKMAYLEKLRENGVVNIEMESTIFAALTHHAGIKAAVVCVAL LNRLNGDQVNAPKEVMNEWQARPQILVSRYIRKVLTHNGQLKALFGHQGS IKSPRRFKLVQQESQAHE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18559-PA | 368 | GF18559-PA | 1..368 | 1..368 | 1814 | 94 | Plus |
Dana\GF11317-PA | 383 | GF11317-PA | 60..346 | 50..335 | 934 | 57.5 | Plus |
Dana\GF18560-PA | 300 | GF18560-PA | 3..297 | 44..335 | 658 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12162-PA | 368 | GG12162-PA | 1..368 | 1..368 | 1964 | 98.1 | Plus |
Dere\GG20084-PA | 378 | GG20084-PA | 57..346 | 50..338 | 948 | 57.9 | Plus |
Dere\GG24468-PA | 308 | GG24468-PA | 14..306 | 46..335 | 707 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19373-PA | 346 | GH19373-PA | 10..346 | 24..368 | 1694 | 90.4 | Plus |
Dgri\GH19384-PA | 350 | GH19384-PA | 51..337 | 50..335 | 912 | 56.8 | Plus |
Dgri\GH19395-PA | 301 | GH19395-PA | 7..301 | 46..337 | 732 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6330-PA | 368 | CG6330-PA | 1..368 | 1..368 | 1939 | 100 | Plus |
CG6330-PB | 347 | CG6330-PB | 10..347 | 23..368 | 1724 | 96 | Plus |
CG3788-PB | 378 | CG3788-PB | 57..346 | 50..338 | 928 | 59 | Plus |
CG3788-PA | 378 | CG3788-PA | 57..346 | 50..338 | 928 | 59 | Plus |
CG17224-PD | 300 | CG17224-PD | 2..298 | 42..335 | 693 | 45.2 | Plus |
CG17224-PC | 300 | CG17224-PC | 2..298 | 42..335 | 693 | 45.2 | Plus |
CG17224-PB | 300 | CG17224-PB | 2..298 | 42..335 | 693 | 45.2 | Plus |
CG17224-PA | 300 | CG17224-PA | 2..298 | 42..335 | 693 | 45.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22212-PA | 363 | GI22212-PA | 1..363 | 1..368 | 1749 | 89.2 | Plus |
Dmoj\GI22215-PA | 360 | GI22215-PA | 54..340 | 50..335 | 933 | 57.1 | Plus |
Dmoj\GI22213-PA | 297 | GI22213-PA | 5..296 | 47..335 | 704 | 45.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27259-PA | 365 | GL27259-PA | 1..365 | 1..368 | 1825 | 91.3 | Plus |
Dper\GL23743-PA | 373 | GL23743-PA | 53..344 | 43..333 | 914 | 55.1 | Plus |
Dper\GL25985-PA | 256 | GL25985-PA | 1..243 | 100..342 | 737 | 54.5 | Plus |
Dper\GL27260-PA | 297 | GL27260-PA | 5..295 | 46..335 | 712 | 44.7 | Plus |
Dper\GL25965-PA | 223 | GL25965-PA | 73..218 | 45..191 | 452 | 55.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19516-PA | 365 | GA19516-PA | 1..365 | 1..368 | 1825 | 91.3 | Plus |
Dpse\GA19516-PB | 347 | GA19516-PB | 10..347 | 23..368 | 1677 | 89.9 | Plus |
Dpse\GA26722-PA | 373 | GA26722-PA | 53..344 | 43..333 | 914 | 55.1 | Plus |
Dpse\GA23650-PA | 377 | GA23650-PA | 63..353 | 45..335 | 885 | 54.8 | Plus |
Dpse\GA27021-PA | 297 | GA27021-PA | 5..295 | 46..335 | 717 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10155-PA | 347 | GM10155-PA | 7..347 | 20..368 | 1772 | 94.6 | Plus |
Dsec\GM15599-PA | 378 | GM15599-PA | 57..346 | 50..338 | 964 | 59 | Plus |
Dsec\GM18176-PA | 300 | GM18176-PA | 2..298 | 42..335 | 717 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18110-PA | 347 | GD18110-PA | 7..347 | 20..368 | 1772 | 94.6 | Plus |
Dsim\GD25095-PA | 378 | GD25095-PA | 57..346 | 50..338 | 966 | 59.3 | Plus |
Dsim\GD12000-PA | 279 | GD12000-PA | 2..279 | 42..316 | 673 | 46.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24332-PA | 346 | GJ24332-PA | 14..346 | 36..368 | 1641 | 89.8 | Plus |
Dvir\GJ24333-PA | 343 | GJ24333-PA | 30..323 | 43..335 | 966 | 58.8 | Plus |
Dvir\GJ24335-PA | 303 | GJ24335-PA | 1..283 | 56..335 | 782 | 50.5 | Plus |
Dvir\GJ24336-PA | 299 | GJ24336-PA | 5..297 | 46..335 | 754 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11445-PA | 368 | GK11445-PA | 1..368 | 1..368 | 1839 | 91.6 | Plus |
Dwil\GK15591-PA | 371 | GK15591-PA | 52..345 | 43..335 | 907 | 55.1 | Plus |
Dwil\GK11446-PA | 299 | GK11446-PA | 4..298 | 45..335 | 755 | 45.9 | Plus |
Dwil\GK11364-PA | 363 | GK11364-PA | 55..344 | 46..335 | 727 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10606-PA | 347 | GE10606-PA | 7..347 | 20..368 | 1771 | 94.3 | Plus |
Dyak\GE11621-PA | 382 | GE11621-PA | 57..346 | 50..338 | 955 | 58.6 | Plus |
Dyak\GE14961-PA | 300 | GE14961-PA | 2..298 | 42..335 | 712 | 44.8 | Plus |
Translation from 110 to 1216
> GH09623.hyp MPPTITDNQTHDFKAHYDCAHRSSLQDDETDDAYVKRITRYSDGTVKLRN SNIELMDQDILYHLALGSESHDLQEMFGDVKFVCMGGTPKRMENFAHFIM NEIGYKLPAGTQLQDISAYSYRYSMYKVGPVLCVSHGMGTPSVSILMHEM IKLMYHAKCKDPVFIRIGTCGGIGVDGGTVIITEDALDGQLRNSHEFTIL GKTIHRPAKLDKKLARELKSLASPDDPYDTIIGKTLCTNDFYEGQGRLDG AFCDFSENEKMAYLEKLRENGVVNIEMESTIFAALTHHAGIKAAVVCVAL LNRLNGDQVNAPKEVMNEWQARPQILVSRYIRKVLTHNGQLKALFGHQGS IKSPRRFKLVQQESQAHE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6330-PA | 368 | CG6330-PA | 1..368 | 1..368 | 1939 | 100 | Plus |
CG6330-PB | 347 | CG6330-PB | 10..347 | 23..368 | 1724 | 96 | Plus |
CG3788-PB | 378 | CG3788-PB | 57..346 | 50..338 | 928 | 59 | Plus |
CG3788-PA | 378 | CG3788-PA | 57..346 | 50..338 | 928 | 59 | Plus |
CG17224-PD | 300 | CG17224-PD | 2..298 | 42..335 | 693 | 45.2 | Plus |