BDGP Sequence Production Resources |
Search the DGRC for GH09647
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 96 |
Well: | 47 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8080-RA |
Protein status: | GH09647.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1729 |
Gene | Date | Evidence |
---|---|---|
CG8080 | 2001-01-01 | Release 2 assignment |
CG8080 | 2002-05-30 | Blastp of sequenced clone |
CG8080 | 2008-04-29 | Release 5.5 accounting |
CG8080 | 2008-08-15 | Release 5.9 accounting |
CG8080 | 2008-12-18 | 5.12 accounting |
1729 bp (1729 high quality bases) assembled on 2002-05-30
GenBank Submission: AY118304
> GH09647.complete CACCCAGAGAGCGGACGTGAAAATGATCATCGGGATCGGATAGCGGGATA GTTAGTAGTGATCGTAACTTAGGATAGTGTGCTAAACACTAACCTCAACC TATGTTTTGTGCTTTGTCGAGTGTAGAACGAACACGCAGTTATTTTGTTG TTTGTGCAAAAGCATTCGAAAGTGGCCAACTGAAGAAAGAGCCATCGATT CTTTGCATTTGGTTACTTTTATAGCGTAGTCTTTTTCCCAAACGATTTTC TTAACGAATACGAAATAAACTGAACACAGTACCCTAAATGTGCGTTGTTC GTCTTCGGTAGTGCCAAGCATGTTGAAGTCGAAGCAGTTGCTCCAACAGT TTTCCAAAGAGTACGCTAAATATACGCCGACCAACTTCAAGCTAAAGCGG GCCCTGGTCGTCACCAAGCTGTCCCGCTATGAGTTCGAGCAGCTACGCCA CCCGGAACTGTCTCCGGATCAGCTCCAGCAAAAGCTCCGTGACCGGGGCA CCGACGTGGAGATGGTCCTCCATCTGCACAAGGTGCACAAGGACTTCGAG CGGCGGGTCGTGCAGAGCTTCCAGGACGTCGGCTGCGAGGTGAAGTTGTC CAGCAGACTTGAATTTAGAAGCTCGTTGAGCAAGGACGTCATGAGCTGGG CGGACGTCATCGTGCCGGTGGGCGGCGATGGCACTTTCCTTCTCTCCGCC GGACGCGCCAGTCCGCTCTTCGCGCTCAGCCAGCAGAAGACGCCGATCGT GGGCTTCAACTCGGATCCGCTTCACTCGGAGGGCCGACTCATGCTGCCCA AGCACTACTCGGATAATCCGGCCGACGCCGTTTCCCGCATCAAGAGCGGA GATTTCAAGTGGATGCATCGCTCGAGGGTGCGGACTACGATGCTTGGTAG CAACGGCAATATTCCGGAGCCGACTGACCTTTTCCGCCACACGGAGGTCA AGATGGAGCAGGTCAGCACCGCACCCGAAATGCTGGACCAGGACATGGCC TACAAGTACAAGGCCAAGATGAAACGTGTTCTTCCTTACTTGGCTTTGAA CGAGGTATTTATTGGCGAGCATCTATCGGCCCGAGTGTCCCACTTGCAAC TGGTGCTGGACCACCAGGACGTGGTGAACAAGACCAAATGCTCCGGACTG TGCGTCAGCACGGGCACGGGCTCAACATCCTGGCACACCAGCATCAATCG CATCACAAGCCGAGATGTGGACGACCTGTTGCGTTCCCTGCCCGACGGCG ATTCAAAGAACGTGATGATGCTACGACAAAATGCAGAGGAGATCGCCCAG CGGTACAACCAAGGCCTGCTCTTCGCGCCAGACGACCCGCGCCTCTGCTA TTCCATCCGGGAGCAAATCTGCGTGGGCGTGTGGCCTTCGCCAAAGACTT TTAAGGAGCGCGATTTTGTGCAGACCGTGTTTGTCAAGTCGCATTGCATC GATGCCAACCTGGTTATAGATGGCAGCATTTCGTTCCCCTTCAACGATGG CGCCAAGGCTTTGCTAGAGGTTCACCCAGAAGATGCCCTTCTGACAATCG CTTTAGACTGAATCCAGTGATGCGCCCCTAGTGCCTGGTCATCTCGCTCT AGCATGTCTGAATTTTTGAAATTATTTAAGTAAGCATTTTGCAACTACTT AGCAGTGTAAGCTCAAAAGTTATTTTGTTATTTTATAAAAGTATATTTAA ACATCAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4977652..4978056 | 1457..1053 | 2010 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 4980009..4980367 | 359..1 | 1795 | 100 | Minus |
chr2R | 21145070 | chr2R | 4978984..4979232 | 606..358 | 1245 | 100 | Minus |
chr2R | 21145070 | chr2R | 4977343..4977590 | 1705..1458 | 1240 | 100 | Minus |
chr2R | 21145070 | chr2R | 4978379..4978625 | 848..602 | 1235 | 100 | Minus |
chr2R | 21145070 | chr2R | 4978109..4978315 | 1057..851 | 1035 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9090083..9090487 | 1457..1053 | 2025 | 100 | Minus |
2R | 25286936 | 2R | 9092432..9092790 | 359..1 | 1795 | 100 | Minus |
2R | 25286936 | 2R | 9089773..9090021 | 1706..1458 | 1245 | 100 | Minus |
2R | 25286936 | 2R | 9091407..9091655 | 606..358 | 1245 | 100 | Minus |
2R | 25286936 | 2R | 9090810..9091056 | 848..602 | 1235 | 100 | Minus |
2R | 25286936 | 2R | 9090540..9090749 | 1057..848 | 1050 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9091282..9091686 | 1457..1053 | 2025 | 100 | Minus |
2R | 25260384 | 2R | 9093631..9093989 | 359..1 | 1795 | 100 | Minus |
2R | 25260384 | 2R | 9092606..9092854 | 606..358 | 1245 | 100 | Minus |
2R | 25260384 | 2R | 9090972..9091220 | 1706..1458 | 1245 | 100 | Minus |
2R | 25260384 | 2R | 9092009..9092255 | 848..602 | 1235 | 100 | Minus |
2R | 25260384 | 2R | 9091739..9091948 | 1057..848 | 1050 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4978380..4978620 | 607..847 | 100 | <- | Minus |
chr2R | 4977343..4977590 | 1458..1705 | 100 | <- | Minus |
chr2R | 4977652..4978054 | 1055..1457 | 99 | <- | Minus |
chr2R | 4978112..4978318 | 848..1054 | 99 | <- | Minus |
chr2R | 4978984..4979230 | 360..606 | 100 | <- | Minus |
chr2R | 4980009..4980367 | 1..359 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8080-RA | 1..1242 | 320..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8080-RA | 1..1242 | 320..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8080-RA | 1..1242 | 320..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8080-RA | 1..1242 | 320..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8080-RA | 1..1242 | 320..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8080-RA | 180..1884 | 1..1705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8080-RA | 180..1884 | 1..1705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8080-RA | 104..1808 | 1..1705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8080-RA | 180..1884 | 1..1705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8080-RA | 104..1808 | 1..1705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9089774..9090021 | 1458..1705 | 100 | <- | Minus |
2R | 9090083..9090485 | 1055..1457 | 100 | <- | Minus |
2R | 9090543..9090749 | 848..1054 | 100 | <- | Minus |
2R | 9090811..9091051 | 607..847 | 100 | <- | Minus |
2R | 9091407..9091653 | 360..606 | 100 | <- | Minus |
2R | 9092432..9092790 | 1..359 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9089774..9090021 | 1458..1705 | 100 | <- | Minus |
2R | 9090083..9090485 | 1055..1457 | 100 | <- | Minus |
2R | 9090543..9090749 | 848..1054 | 100 | <- | Minus |
2R | 9090811..9091051 | 607..847 | 100 | <- | Minus |
2R | 9091407..9091653 | 360..606 | 100 | <- | Minus |
2R | 9092432..9092790 | 1..359 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9089774..9090021 | 1458..1705 | 100 | <- | Minus |
2R | 9090083..9090485 | 1055..1457 | 100 | <- | Minus |
2R | 9090543..9090749 | 848..1054 | 100 | <- | Minus |
2R | 9090811..9091051 | 607..847 | 100 | <- | Minus |
2R | 9091407..9091653 | 360..606 | 100 | <- | Minus |
2R | 9092432..9092790 | 1..359 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4977279..4977526 | 1458..1705 | 100 | <- | Minus |
arm_2R | 4977588..4977990 | 1055..1457 | 100 | <- | Minus |
arm_2R | 4978048..4978254 | 848..1054 | 100 | <- | Minus |
arm_2R | 4978316..4978556 | 607..847 | 100 | <- | Minus |
arm_2R | 4978912..4979158 | 360..606 | 100 | <- | Minus |
arm_2R | 4979937..4980295 | 1..359 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9091742..9091948 | 848..1054 | 100 | <- | Minus |
2R | 9090973..9091220 | 1458..1705 | 100 | <- | Minus |
2R | 9091282..9091684 | 1055..1457 | 100 | <- | Minus |
2R | 9092010..9092250 | 607..847 | 100 | <- | Minus |
2R | 9092606..9092852 | 360..606 | 100 | <- | Minus |
2R | 9093631..9093989 | 1..359 | 100 | Minus |
Translation from 319 to 1560
> GH09647.hyp MLKSKQLLQQFSKEYAKYTPTNFKLKRALVVTKLSRYEFEQLRHPELSPD QLQQKLRDRGTDVEMVLHLHKVHKDFERRVVQSFQDVGCEVKLSSRLEFR SSLSKDVMSWADVIVPVGGDGTFLLSAGRASPLFALSQQKTPIVGFNSDP LHSEGRLMLPKHYSDNPADAVSRIKSGDFKWMHRSRVRTTMLGSNGNIPE PTDLFRHTEVKMEQVSTAPEMLDQDMAYKYKAKMKRVLPYLALNEVFIGE HLSARVSHLQLVLDHQDVVNKTKCSGLCVSTGTGSTSWHTSINRITSRDV DDLLRSLPDGDSKNVMMLRQNAEEIAQRYNQGLLFAPDDPRLCYSIREQI CVGVWPSPKTFKERDFVQTVFVKSHCIDANLVIDGSISFPFNDGAKALLE VHPEDALLTIALD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8080-PA | 413 | CG8080-PA | 1..413 | 1..413 | 2142 | 100 | Plus |
CG8080-PB | 409 | CG8080-PB | 1..409 | 1..413 | 2107 | 99 | Plus |
CG8080-PC | 408 | CG8080-PC | 1..408 | 1..413 | 2101 | 98.8 | Plus |
CG8080-PE | 413 | CG8080-PE | 1..413 | 1..413 | 2078 | 97.1 | Plus |
CG8080-PD | 409 | CG8080-PD | 1..409 | 1..413 | 2043 | 96.1 | Plus |
Translation from 319 to 1560
> GH09647.pep MLKSKQLLQQFSKEYAKYTPTNFKLKRALVVTKLSRYEFEQLRHPELSPD QLQQKLRDRGTDVEMVLHLHKVHKDFERRVVQSFQDVGCEVKLSSRLEFR SSLSKDVMSWADVIVPVGGDGTFLLSAGRASPLFALSQQKTPIVGFNSDP LHSEGRLMLPKHYSDNPADAVSRIKSGDFKWMHRSRVRTTMLGSNGNIPE PTDLFRHTEVKMEQVSTAPEMLDQDMAYKYKAKMKRVLPYLALNEVFIGE HLSARVSHLQLVLDHQDVVNKTKCSGLCVSTGTGSTSWHTSINRITSRDV DDLLRSLPDGDSKNVMMLRQNAEEIAQRYNQGLLFAPDDPRLCYSIREQI CVGVWPSPKTFKERDFVQTVFVKSHCIDANLVIDGSISFPFNDGAKALLE VHPEDALLTIALD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12712-PA | 413 | GF12712-PA | 1..413 | 1..413 | 2006 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10586-PA | 413 | GG10586-PA | 1..413 | 1..413 | 2189 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20283-PA | 413 | GH20283-PA | 1..413 | 1..413 | 1945 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8080-PA | 413 | CG8080-PA | 1..413 | 1..413 | 2142 | 100 | Plus |
CG8080-PB | 409 | CG8080-PB | 1..409 | 1..413 | 2107 | 99 | Plus |
CG8080-PC | 408 | CG8080-PC | 1..408 | 1..413 | 2101 | 98.8 | Plus |
CG8080-PE | 413 | CG8080-PE | 1..413 | 1..413 | 2078 | 97.1 | Plus |
CG8080-PD | 409 | CG8080-PD | 1..409 | 1..413 | 2043 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19454-PA | 413 | GI19454-PA | 1..413 | 1..413 | 1883 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16853-PA | 413 | GL16853-PA | 1..413 | 1..413 | 2033 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20809-PA | 413 | GA20809-PA | 1..413 | 1..413 | 2033 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20634-PA | 413 | GM20634-PA | 1..413 | 1..413 | 2186 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10107-PA | 413 | GD10107-PA | 1..413 | 1..413 | 2190 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21205-PA | 413 | GJ21205-PA | 1..413 | 1..413 | 1956 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22965-PA | 413 | GK22965-PA | 1..413 | 1..413 | 2021 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22598-PA | 413 | GE22598-PA | 1..413 | 1..413 | 2192 | 98.3 | Plus |