GH09754.complete Sequence
806 bp (806 high quality bases) assembled on 2004-06-15
GenBank Submission: AY069082
> GH09754.complete
AAAGAGCGAGGTTCAAGCGAAACGTTCCACGAAAGATATATACGGCTAAA
GTGGTGCAGTTGTCCAAGGAATCCAGAATAGCAGTATGTTAGCCTCAGTT
GCCGCCCGTCTGGCGCTGTTCGCTGTGATAAGCACCCAGAGTCTGCAGCT
CCTCCAGGCTGCTCCGTTCCCAGGCATCGAGAATGCTGCCTTCACCAGTG
ACGATTTATTGGCCGAGGAATCGTCGCCCGTTGTTAGCCAGGTCCACGTC
CAGCACAATCGGCATCGTCGCCATCACGAGGATGGCAATTACCATGGGCA
CAGACACCATAAGCGGCACTGGGATCACCATTTTCCGGGTCCAGACTGCC
ATCACCCTGCCAGATTCGGGTTTGGATTTGAGCATGGAGGACCACCTCCC
CAAGGCCACCACCACAGATTCGAGCCACATGACTTCCAACCGTTTCCAAA
TGCCTTTGGACCACCGGAATATGAGGAGCACCGGCGGCCATTTGAAGCGC
CACTGGAGCCTTTTGAAGAAAATAAAGGGGGAATCAAGGAGCTTACAAAG
CAAGCGAGCTCAAGCAGCTTAGCTCCACCACCCGCAGCTCCAGTAACGCC
TTCCTCACGCACCAGCACCACCACCACGACAACCACCAGCACCACCAGAT
CGACTACCTTGGCACCCACCTCTTCCAGCACCGAAGAGGCACCCTTGGCC
ATCGACATACGCATCGGCTGACGAACCTAGACCTAAGGCTCCATTCTATC
TTATGCATTAAAGTGACATTAAAGTTGCTAGCCAAACCAAAAAAAAAAAA
AAAAAA
GH09754.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:01:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9312.c | 1219 | CG9312.c | 427..1215 | 1..789 | 3945 | 100 | Plus |
CG9312-RA | 1161 | CG9312-RA | 151..939 | 1..789 | 3945 | 100 | Plus |
CG9312.a | 857 | CG9312.a | 252..854 | 187..789 | 3015 | 100 | Plus |
CG9312.a | 857 | CG9312.a | 50..235 | 1..186 | 930 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:15:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 9590983..9591311 | 190..518 | 1600 | 99.1 | Plus |
chr3R | 27901430 | chr3R | 9591705..9591976 | 517..788 | 1360 | 100 | Plus |
chr3R | 27901430 | chr3R | 9590648..9590756 | 1..109 | 545 | 100 | Plus |
chr3R | 27901430 | chr3R | 9590818..9590894 | 110..186 | 385 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:41:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:15:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13766106..13766437 | 187..518 | 1660 | 100 | Plus |
3R | 32079331 | 3R | 13766832..13767104 | 517..789 | 1365 | 100 | Plus |
3R | 32079331 | 3R | 13765775..13765883 | 1..109 | 545 | 100 | Plus |
3R | 32079331 | 3R | 13765945..13766021 | 110..186 | 385 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:49:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 13506937..13507268 | 187..518 | 1660 | 100 | Plus |
3R | 31820162 | 3R | 13507663..13507935 | 517..789 | 1365 | 100 | Plus |
3R | 31820162 | 3R | 13506606..13506714 | 1..109 | 545 | 100 | Plus |
3R | 31820162 | 3R | 13506776..13506852 | 110..186 | 385 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 16:15:05 has no hits.
GH09754.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:16:00 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 9590648..9590756 | 1..109 | 100 | -> | Plus |
chr3R | 9590818..9590894 | 110..186 | 100 | -> | Plus |
chr3R | 9590980..9591311 | 187..518 | 98 | -> | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:31:28 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9312-RA | 1..636 | 86..721 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:36:13 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9312-RA | 1..636 | 86..721 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:06:15 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9312-RA | 1..636 | 86..721 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:20:03 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9312-RA | 1..636 | 86..721 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:24:00 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9312-RA | 1..636 | 86..721 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:43:15 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9312-RA | 1..788 | 1..788 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:36:12 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9312-RA | 1..788 | 1..788 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:06:15 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9312-RA | 20..807 | 1..788 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:20:04 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9312-RA | 1..788 | 1..788 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:24:00 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9312-RA | 20..807 | 1..788 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:16:00 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13765775..13765883 | 1..109 | 100 | -> | Plus |
3R | 13765945..13766021 | 110..186 | 100 | -> | Plus |
3R | 13766106..13766437 | 187..518 | 100 | -> | Plus |
3R | 13766834..13767103 | 519..788 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:16:00 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13765775..13765883 | 1..109 | 100 | -> | Plus |
3R | 13765945..13766021 | 110..186 | 100 | -> | Plus |
3R | 13766106..13766437 | 187..518 | 100 | -> | Plus |
3R | 13766834..13767103 | 519..788 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:16:00 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13765775..13765883 | 1..109 | 100 | -> | Plus |
3R | 13765945..13766021 | 110..186 | 100 | -> | Plus |
3R | 13766106..13766437 | 187..518 | 100 | -> | Plus |
3R | 13766834..13767103 | 519..788 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:06:15 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9591497..9591605 | 1..109 | 100 | -> | Plus |
arm_3R | 9591667..9591743 | 110..186 | 100 | -> | Plus |
arm_3R | 9591828..9592159 | 187..518 | 100 | -> | Plus |
arm_3R | 9592556..9592825 | 519..788 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:57:20 Download gff for
GH09754.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13506937..13507268 | 187..518 | 100 | -> | Plus |
3R | 13507665..13507934 | 519..788 | 100 | | Plus |
3R | 13506606..13506714 | 1..109 | 100 | -> | Plus |
3R | 13506776..13506852 | 110..186 | 100 | -> | Plus |
GH09754.pep Sequence
Translation from 85 to 720
> GH09754.pep
MLASVAARLALFAVISTQSLQLLQAAPFPGIENAAFTSDDLLAEESSPVV
SQVHVQHNRHRRHHEDGNYHGHRHHKRHWDHHFPGPDCHHPARFGFGFEH
GGPPPQGHHHRFEPHDFQPFPNAFGPPEYEEHRRPFEAPLEPFEENKGGI
KELTKQASSSSLAPPPAAPVTPSSRTSTTTTTTTSTTRSTTLAPTSSSTE
EAPLAIDIRIG*
GH09754.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:20:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF18615-PA | 203 | GF18615-PA | 1..203 | 1..211 | 467 | 58.6 | Plus |
Dana\GF16881-PA | 87 | GF16881-PA | 1..87 | 1..87 | 199 | 52.2 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:20:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG19809-PA | 211 | GG19809-PA | 1..211 | 1..211 | 682 | 84.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9312-PA | 211 | CG9312-PA | 1..211 | 1..211 | 1150 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 19:20:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL23090-PA | 203 | GL23090-PA | 1..203 | 1..211 | 304 | 52 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:20:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA21691-PA | 203 | GA21691-PA | 1..203 | 1..211 | 293 | 51.1 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:20:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM24129-PA | 214 | GM24129-PA | 1..214 | 1..211 | 788 | 88.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:20:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD18928-PA | 208 | GD18928-PA | 1..208 | 1..211 | 703 | 89.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:20:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE26295-PA | 213 | GE26295-PA | 1..213 | 1..211 | 784 | 84.5 | Plus |
GH09754.hyp Sequence
Translation from 85 to 720
> GH09754.hyp
MLASVAARLALFAVISTQSLQLLQAAPFPGIENAAFTSDDLLAEESSPVV
SQVHVQHNRHRRHHEDGNYHGHRHHKRHWDHHFPGPDCHHPARFGFGFEH
GGPPPQGHHHRFEPHDFQPFPNAFGPPEYEEHRRPFEAPLEPFEENKGGI
KELTKQASSSSLAPPPAAPVTPSSRTSTTTTTTTSTTRSTTLAPTSSSTE
EAPLAIDIRIG*
GH09754.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:48:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9312-PA | 211 | CG9312-PA | 1..211 | 1..211 | 1150 | 100 | Plus |