![]() | BDGP Sequence Production Resources |
Search the DGRC for GH09755
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 97 |
Well: | 55 |
Vector: | pOT2 |
Associated Gene/Transcript | pcs-RB |
Protein status: | GH09755.pep: gold |
Preliminary Size: | 1921 |
Sequenced Size: | 2205 |
Gene | Date | Evidence |
---|---|---|
CG7761 | 2001-01-01 | Release 2 assignment |
CG7761 | 2001-09-19 | Blastp of sequenced clone |
CG7761 | 2003-01-01 | Sim4 clustering to Release 3 |
pcs | 2008-04-29 | Release 5.5 accounting |
pcs | 2008-08-15 | Release 5.9 accounting |
pcs | 2008-12-18 | 5.12 accounting |
2205 bp (2205 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058328
> GH09755.complete CTGGACGCGTCTTTAATTTTTAGGATAGTTTAGCCTTTATAAGCGAGTTA ATTAAATATCTTAGATGCCCCGAGCGAAGGAGAAGGTGAAAAGCCGCGTG CCCTGTCCACTTGTACCGTTCGTCTTGTTCACACTTAATGTAATCGCCAT GTGTCCCTTTCCCTTTTCGCTTTTAACTTCGTTGTGAAACATAAGACGCA AAATGAAATATTTGTTTTAATACTGCTGCTGTACCCGCATAGCAAATTGC CAGTTAAAATTGCCAACACCAATTTACATAATATTATAGAAAAAAACACA GAAAAAAAAAAGAAAAACAAAACACACAAGCAAATTGATAGTCGTGGGAT GTGTCTGTGTAGCAACGAGATCAAATAGTGAAATGCAAAAGCGTTTTTCA ATTGAAAAGCGGGCTGCAGAAAAGTGAAAATTAACGCGTTTAGCGATATA TTTGCATTTGGAACGAATTCAGTGAAAACCAGTAAAAATGTCGAGTGCAG AAGACGGCGAGCTGGATCCCCAAATTCAGATTGAACTGGAGAATCTCAAT AGTGCAACCGATGAGATTAATAAGCTAGAAATCGAGCTAGAGGAGGCTAA TTCCACCTTTCGCATCCTGTTAAATGAATCTACACGCCGCCTTAAAGTTT CCTCCAAAAAGTTGGGCAACTGCATAGAGAAGGCTAGACCCTACTACGAG GCATTGGACAAGGCACGCGAGGCACAAATCGAATGCCAAAAAGCAGCGGT TAAGTTCCAGCGAGCTAATGAAATCCATGCCGCAGCCAAGGAGACGGTGG CGCTTGCTGAGCAGCGTTTTATGTCCAACTCGCACGAATGGCAGTTCGAC AATGCCTGGCAGGAGATGCTTAACCATGCTACCCAGAAGGTGATGGATGC CGAAACGCAGAAAGCCGACTGTCATGCTGAGCACCAGAGGCTCACCAAAC TTTTTAACGCCGCCGAGCAAAAGCTGCAACAGCTTGAGGATCGTTTTCGT CGTAGCATCAACAAGTCACGCCCGTACTTCGAAGAGAAGCAGGTGTGTCA GGATCAGCTGCAGACACAAAAAAACCGCATTCAGGAGCTGCAGCAGCAGG TGGCCGGTGCTAAGAGCACCTACTCCACGGCCTTACGCAATCTGGAGAGG ATCAGTGAGGATATACATAGGCAGAGGGGAGATTTTCCCACTCCACCAGG ACCCCGCGAGCCGGGTGTGGGAGCAGAGTTAAACTCTCCGACTTCCAGTG CCTTGCCATCACTGCCCGATTTCCAGCTGGAGCTTGAGAAGTGCGACTAT CCCTCCATAGCGGGCAGCCAGATGTCTTTGGGCGCAAAAACTCCCCAAGC AGCTGCCGAAACTGAAGATGAGGAAGATGCCTGCGACTACGATGAAACGG GAGCCGGGGAGCTCAGAGGTGTAGTGGATGAACGCGATTTGGAGGCGCTG CGACAGAAGGTCAAGATCCTGGCGGTGCGTCCCATCGAGGGCGGAGATGG ACAGCAGCAGAACGATGTGTGGGAGCATGAACTGAAGGCCACGGTGGACA AGCTGGATCACTTGATGATGCTGAAAGAAACAGCCAAAAGGCAGCAAACG AACCGCTTGAAGTCCACCGAACAGCGACCCGATTCATTGGGCGCCGAGGC CTTGAAACGCCACTGCGATGTGGTCGAGGTGAAGGTCACCTCTTGCGCCA CCACAGCCAGCTTGCCAGTCACACCCCATCACCAGCTGAATCACCTTGCA CCGCCCACGCCCATTAAGAAGCTGCAACAGCAACTGGCGCCCTTGCCCTC CGTAAACGTTTCCATGCGGGAGTTGCCCCTGTTGGCCAGGTTGTCCAACG AGCTCCTGGATCGCAGCAGTGCTGCTTTCGGCGGAGTGCGCAAGACGCTG CGTAGGCGCTCTCTGGAATAGTGAGCAACTAGGGGGCCAGAGGAGACTTC TTCAGCCAGCCCCATATCAGATTTGTTTATATTAAATGAATAATGAAAAG TAATTGTAAAACGTTGAACGCCGCATTTAAATGTGCACCACTATCGATAA GTCTCTACACCCACAGGATATAAACACCAACTATTTTCGTATAAATGTTG ATTACATTCTAATCTATTGTCTCCGTATATGTTTCTCACTGTTAATACTT TAACTATGTAAATGTTTTGTGATTCGAGAGAGCTAAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pcs.c | 2697 | pcs.c | 84..2277 | 1..2194 | 10955 | 99.9 | Plus |
pcs-RB | 2296 | pcs-RB | 84..2277 | 1..2194 | 10955 | 99.9 | Plus |
pcs.d | 2408 | pcs.d | 101..2102 | 193..2194 | 9995 | 99.9 | Plus |
pcs.d | 2408 | pcs.d | 19..103 | 1..85 | 425 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 10877191..10878605 | 770..2184 | 7075 | 100 | Plus |
chr2R | 21145070 | chr2R | 10868568..10869095 | 1..529 | 2595 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 10876949..10877128 | 591..770 | 900 | 100 | Plus |
chr2R | 21145070 | chr2R | 10876817..10876885 | 525..593 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 14989922..14991346 | 770..2194 | 7110 | 99.9 | Plus |
2R | 25286936 | 2R | 14981295..14981823 | 1..529 | 2645 | 100 | Plus |
2R | 25286936 | 2R | 14989680..14989859 | 591..770 | 900 | 100 | Plus |
2R | 25286936 | 2R | 14989548..14989616 | 525..593 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 14991121..14992545 | 770..2194 | 7110 | 99.9 | Plus |
2R | 25260384 | 2R | 14982494..14983022 | 1..529 | 2645 | 100 | Plus |
2R | 25260384 | 2R | 14990879..14991058 | 591..770 | 900 | 100 | Plus |
2R | 25260384 | 2R | 14990747..14990815 | 525..593 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 6131..6227 | 245..342 | 126 | 64 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10868568..10869095 | 1..529 | 99 | -> | Plus |
chr2R | 10876822..10876888 | 530..595 | 97 | -> | Plus |
chr2R | 10876954..10877128 | 596..770 | 100 | -> | Plus |
chr2R | 10877192..10878605 | 771..2184 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pcs-RA | 1..1431 | 488..1921 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pcs-RB | 1..1434 | 488..1921 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pcs-RB | 1..1434 | 488..1921 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pcs-RA | 1..1431 | 488..1921 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pcs-RB | 1..1434 | 488..1921 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pcs-RA | 1..2181 | 1..2184 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pcs-RB | 19..2202 | 1..2184 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pcs-RB | 33..2216 | 1..2184 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pcs-RA | 1..2181 | 1..2184 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pcs-RB | 33..2216 | 1..2184 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14981295..14981823 | 1..529 | 100 | -> | Plus |
2R | 14989553..14989619 | 530..595 | 97 | -> | Plus |
2R | 14989685..14989859 | 596..770 | 100 | -> | Plus |
2R | 14989923..14991336 | 771..2184 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14981295..14981823 | 1..529 | 100 | -> | Plus |
2R | 14989553..14989619 | 530..595 | 97 | -> | Plus |
2R | 14989685..14989859 | 596..770 | 100 | -> | Plus |
2R | 14989923..14991336 | 771..2184 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14981295..14981823 | 1..529 | 100 | -> | Plus |
2R | 14989553..14989619 | 530..595 | 97 | -> | Plus |
2R | 14989685..14989859 | 596..770 | 100 | -> | Plus |
2R | 14989923..14991336 | 771..2184 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10868800..10869328 | 1..529 | 100 | -> | Plus |
arm_2R | 10877058..10877124 | 530..595 | 97 | -> | Plus |
arm_2R | 10877190..10877364 | 596..770 | 100 | -> | Plus |
arm_2R | 10877428..10878841 | 771..2184 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14990884..14991058 | 596..770 | 100 | -> | Plus |
2R | 14982494..14983022 | 1..529 | 100 | -> | Plus |
2R | 14990752..14990818 | 530..595 | 97 | -> | Plus |
2R | 14991122..14992535 | 771..2184 | 100 | Plus |
Translation from 487 to 1920
> GH09755.pep MSSAEDGELDPQIQIELENLNSATDEINKLEIELEEANSTFRILLNESTR RLKVSSKKLGNCIEKARPYYEALDKAREAQIECQKAAVKFQRANEIHAAA KETVALAEQRFMSNSHEWQFDNAWQEMLNHATQKVMDAETQKADCHAEHQ RLTKLFNAAEQKLQQLEDRFRRSINKSRPYFEEKQVCQDQLQTQKNRIQE LQQQVAGAKSTYSTALRNLERISEDIHRQRGDFPTPPGPREPGVGAELNS PTSSALPSLPDFQLELEKCDYPSIAGSQMSLGAKTPQAAAETEDEEDACD YDETGAGELRGVVDERDLEALRQKVKILAVRPIEGGDGQQQNDVWEHELK ATVDKLDHLMMLKETAKRQQTNRLKSTEQRPDSLGAEALKRHCDVVEVKV TSCATTASLPVTPHHQLNHLAPPTPIKKLQQQLAPLPSVNVSMRELPLLA RLSNELLDRSSAAFGGVRKTLRRRSLE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12309-PA | 474 | GF12309-PA | 1..474 | 1..477 | 2286 | 91.4 | Plus |
Dana\GF21571-PA | 187 | GF21571-PA | 1..187 | 1..190 | 334 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20495-PA | 477 | GG20495-PA | 1..477 | 1..477 | 2519 | 99 | Plus |
Dere\GG19446-PA | 175 | GG19446-PA | 1..175 | 1..178 | 309 | 40.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21107-PA | 526 | GH21107-PA | 1..526 | 1..477 | 1943 | 76 | Plus |
Dgri\GH12516-PA | 698 | GH12516-PA | 1..252 | 1..230 | 419 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pcs-PB | 477 | CG7761-PB | 1..477 | 1..477 | 2437 | 100 | Plus |
CG14408-PA | 659 | CG14408-PA | 1..227 | 1..230 | 465 | 43.5 | Plus |
CG14408-PG | 630 | CG14408-PG | 1..252 | 1..230 | 429 | 39.2 | Plus |
CG14408-PE | 684 | CG14408-PE | 1..252 | 1..230 | 429 | 39.2 | Plus |
CG14408-PH | 684 | CG14408-PH | 1..252 | 1..230 | 429 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18709-PA | 499 | GI18709-PA | 1..499 | 1..477 | 2024 | 82.6 | Plus |
Dmoj\GI14868-PA | 678 | GI14868-PA | 1..252 | 1..230 | 412 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10610-PA | 471 | GL10610-PA | 1..471 | 1..477 | 2251 | 90 | Plus |
Dper\GL20153-PA | 202 | GL20153-PA | 1..163 | 13..178 | 270 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20569-PA | 471 | GA20569-PA | 1..471 | 1..477 | 2254 | 90.2 | Plus |
Dpse\GA26629-PA | 691 | GA26629-PA | 1..252 | 1..230 | 409 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21587-PA | 477 | GM21587-PA | 1..477 | 1..477 | 2520 | 99.2 | Plus |
Dsec\GM12036-PA | 175 | GM12036-PA | 1..175 | 1..178 | 309 | 40.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11094-PA | 477 | GD11094-PA | 1..477 | 1..477 | 2527 | 99.4 | Plus |
Dsim\GD15836-PA | 190 | GD15836-PA | 1..72 | 1..72 | 198 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21729-PA | 497 | GJ21729-PA | 1..497 | 1..477 | 2053 | 84.1 | Plus |
Dvir\GJ19530-PA | 236 | GJ19530-PA | 1..175 | 1..178 | 308 | 41 | Plus |
Translation from 820 to 1920
> GH09755.hyp MSNSHEWQFDNAWQEMLNHATQKVMDAETQKADCHAEHQRLTKLFNAAEQ KLQQLEDRFRRSINKSRPYFEEKQVCQDQLQTQKNRIQELQQQVAGAKST YSTALRNLERISEDIHRQRGDFPTPPGPREPGVGAELNSPTSSALPSLPD FQLELEKCDYPSIAGSQMSLGAKTPQAAAETEDEEDACDYDETGAGELRG VVDERDLEALRQKVKILAVRPIEGGDGQQQNDVWEHELKATVDKLDHLMM LKETAKRQQTNRLKSTEQRPDSLGAEALKRHCDVVEVKVTSCATTASLPV TPHHQLNHLAPPTPIKKLQQQLAPLPSVNVSMRELPLLARLSNELLDRSS AAFGGVRKTLRRRSLE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pcs-PB | 477 | CG7761-PB | 112..477 | 1..366 | 1891 | 100 | Plus |
CG14408-PA | 659 | CG14408-PA | 118..227 | 10..119 | 212 | 39.1 | Plus |
CG14408-PG | 630 | CG14408-PG | 118..252 | 10..119 | 176 | 31.9 | Plus |
CG14408-PE | 684 | CG14408-PE | 118..252 | 10..119 | 176 | 31.9 | Plus |
CG14408-PH | 684 | CG14408-PH | 118..252 | 10..119 | 176 | 31.9 | Plus |