BDGP Sequence Production Resources |
Search the DGRC for GH09876
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 98 |
Well: | 76 |
Vector: | pOT2 |
Associated Gene/Transcript | CG10650-RA |
Protein status: | GH09876.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1521 |
Gene | Date | Evidence |
---|---|---|
CG10650 | 2001-01-01 | Release 2 assignment |
CG10650 | 2002-05-15 | Blastp of sequenced clone |
CG10650 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10650 | 2008-04-29 | Release 5.5 accounting |
CG10650 | 2008-08-15 | Release 5.9 accounting |
CG10650 | 2008-12-18 | 5.12 accounting |
1521 bp (1521 high quality bases) assembled on 2002-05-15
GenBank Submission: AY118764
> GH09876.complete CCAGCCGGTCCGACATTTCAGTTGAGAAGCCAGAAAGAATAGAAAACCGA GAGCCATGAGAGAATACAGCCTGTGTATGATTGTGATAGCAGCTTTCATT GCCAGCCAGCTGGACAGCACCTCAGCCCTCCAGTGCTATTCGTGCACATC GACGACGAATGACACTGGAAATTGTTTAACGAGTCCATCTACTCAAACTT CTATAGAGTGTGATAATGAATGCTATACTCTTATTAACGCAGGAACTCTA ACTCGTGGCTGCTTGATTAATGGCACTGCGTGCACCTTACCATCCTGCTC GACCTGCAAGGAAGACAATTGCAATTTGAATTTGGTGTGCCAGCAGTGCC TCGGCGAAGCGAATTGCGCCACGACCAACGTGACGGATACGCAATACAAT GCAGTGTGCCCCAATAATGGACAGGTCTGCGTGAATCAGTTGAATGACAA CAAGACGGTGACCCGTCAATGTGGTGACCCCTGTGCTGCTGGAACGGAAT CCACGTGCTCCTCATGCTCGGCATCCCTGTGCAATGTGGGACTATTCCCC GCCAATCGTCGCCAGTGCTATAATTGCTCAGGAGAGAACTGCAATGCGGT CTCAAATACCTTGGTCGCGGGATGTAGTCAAATCGATGCCGGGTGCTTCA CCACCGGAACGTCTGCGAGCAACATGACCCGTGGTTGCACATCGGCCACC ACGGAAATCAAGTGTGCGTCGGACAGCACTGATCCCAGTTGCCTCGTCTG CAACTCCGACTTTTGCAATAGTCCGACCTACGAACGAGAGGCCGGTTCCT GTATCATTTGCGAGAACTGTGCGGAGCAACAGGTTGCTACCAATGCGAAG TCCTGCGGACAGGCCAAGTACAACCAGGAAGTCGGGTGTTATACCATGAC CTCAGGAACCAATGTTACCCGAGGGTGCCTAAACACCTTGGAGGCTGGCT GCTCTACAACCAATGCCTGCACTTCCTGCTCCGAAAATGGCTGCAATGTG GCTGCCGGCGAGTTCCAGTGCATTACATGCATTTCGAATGAGGTTTCCGG CTGCTGGTCGGCCAAATATCCGGACACGCTCCCTTTGATCAACTGCCCCA ATGGAACGTGCTACAGCGGAGTCTGGAATGAACTTGGAGTGCGAGGATGT TTTACCGCTGCCAGCCACCTGATGCAGTACCAGTGCAATGCCAAAGTGGA GGCCCATCAGTGCGAATTGTGTACGGAGAGCAAGTGCAACAAGGTACCCT TCAATGGAGCAGGCGCACTCAGGAATGTGGGCGTGGTCGGCCTTCTGACG GGAGTGGTGATCGCTCTACGCAGTGCCCTGTAATCCAACCACCTCCACGT AGTTGGATGATCCAATCAAATTACCGGGTGCCTGGGTCTATGAGTAATGT TAACTATTACAAAGCAACAGACAAAAAGACATAACCTAATTATAGGAGCT GAAGCATTTTAAGAACACTTCCATAATCCCAAATAAATCATTTTAATAAA ACAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10650-RA | 1642 | CG10650-RA | 25..1528 | 1..1504 | 7520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 18992837..18993723 | 1127..241 | 4315 | 99.1 | Minus |
chr2L | 23010047 | chr2L | 18992317..18992691 | 1502..1128 | 1875 | 100 | Minus |
chr2L | 23010047 | chr2L | 18994474..18994604 | 131..1 | 655 | 100 | Minus |
chr2L | 23010047 | chr2L | 18994296..18994407 | 243..132 | 560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18994137..18995023 | 1127..241 | 4435 | 100 | Minus |
2L | 23513712 | 2L | 18993615..18993991 | 1504..1128 | 1885 | 100 | Minus |
2L | 23513712 | 2L | 18995779..18995909 | 131..1 | 655 | 100 | Minus |
2L | 23513712 | 2L | 18995601..18995712 | 243..132 | 560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18994137..18995023 | 1127..241 | 4435 | 100 | Minus |
2L | 23513712 | 2L | 18993615..18993991 | 1504..1128 | 1885 | 100 | Minus |
2L | 23513712 | 2L | 18995779..18995909 | 131..1 | 655 | 100 | Minus |
2L | 23513712 | 2L | 18995601..18995712 | 243..132 | 560 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 18992317..18992691 | 1128..1502 | 100 | <- | Minus |
chr2L | 18992837..18993721 | 243..1127 | 99 | <- | Minus |
chr2L | 18994297..18994407 | 132..242 | 100 | <- | Minus |
chr2L | 18994474..18994604 | 1..131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10650-RA | 1..1278 | 56..1333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10650-RA | 1..1278 | 56..1333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10650-RA | 1..1278 | 56..1333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10650-RA | 1..1278 | 56..1333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10650-RA | 1..1278 | 56..1333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10650-RA | 22..1523 | 1..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10650-RA | 22..1523 | 1..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10650-RA | 26..1527 | 1..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10650-RA | 22..1523 | 1..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10650-RA | 26..1527 | 1..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18993617..18993991 | 1128..1502 | 100 | <- | Minus |
2L | 18994137..18995021 | 243..1127 | 100 | <- | Minus |
2L | 18995602..18995712 | 132..242 | 100 | <- | Minus |
2L | 18995779..18995909 | 1..131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18993617..18993991 | 1128..1502 | 100 | <- | Minus |
2L | 18994137..18995021 | 243..1127 | 100 | <- | Minus |
2L | 18995602..18995712 | 132..242 | 100 | <- | Minus |
2L | 18995779..18995909 | 1..131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18993617..18993991 | 1128..1502 | 100 | <- | Minus |
2L | 18994137..18995021 | 243..1127 | 100 | <- | Minus |
2L | 18995602..18995712 | 132..242 | 100 | <- | Minus |
2L | 18995779..18995909 | 1..131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 18995779..18995909 | 1..131 | 100 | Minus | |
arm_2L | 18993617..18993991 | 1128..1502 | 100 | <- | Minus |
arm_2L | 18994137..18995021 | 243..1127 | 100 | <- | Minus |
arm_2L | 18995602..18995712 | 132..242 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18993617..18993991 | 1128..1502 | 100 | <- | Minus |
2L | 18994137..18995021 | 243..1127 | 100 | <- | Minus |
2L | 18995602..18995712 | 132..242 | 100 | <- | Minus |
2L | 18995779..18995909 | 1..131 | 100 | Minus |
Translation from 55 to 1332
> GH09876.hyp MREYSLCMIVIAAFIASQLDSTSALQCYSCTSTTNDTGNCLTSPSTQTSI ECDNECYTLINAGTLTRGCLINGTACTLPSCSTCKEDNCNLNLVCQQCLG EANCATTNVTDTQYNAVCPNNGQVCVNQLNDNKTVTRQCGDPCAAGTEST CSSCSASLCNVGLFPANRRQCYNCSGENCNAVSNTLVAGCSQIDAGCFTT GTSASNMTRGCTSATTEIKCASDSTDPSCLVCNSDFCNSPTYEREAGSCI ICENCAEQQVATNAKSCGQAKYNQEVGCYTMTSGTNVTRGCLNTLEAGCS TTNACTSCSENGCNVAAGEFQCITCISNEVSGCWSAKYPDTLPLINCPNG TCYSGVWNELGVRGCFTAASHLMQYQCNAKVEAHQCELCTESKCNKVPFN GAGALRNVGVVGLLTGVVIALRSAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10650-PB | 425 | CG10650-PB | 1..425 | 1..425 | 2339 | 100 | Plus |
CG10650-PA | 425 | CG10650-PA | 1..425 | 1..425 | 2339 | 100 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2134..2536 | 25..397 | 268 | 25.9 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1291..1703 | 25..403 | 266 | 25.1 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2414..2790 | 56..397 | 252 | 25.8 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2555..2965 | 25..421 | 245 | 24.1 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1963..2372 | 27..395 | 233 | 24.1 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1202..1613 | 25..395 | 227 | 24.6 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1716..2116 | 25..397 | 222 | 23.2 | Plus |
CG13492-PD | 2979 | CG13492-PD | 453..849 | 25..395 | 217 | 24.9 | Plus |
CG15773-PA | 478 | CG15773-PA | 30..363 | 92..396 | 216 | 25.9 | Plus |
CG13492-PD | 2979 | CG13492-PD | 866..1273 | 22..397 | 212 | 24.3 | Plus |
CG15773-PB | 319 | CG15773-PB | 30..315 | 92..354 | 211 | 27.4 | Plus |
CG15773-PA | 478 | CG15773-PA | 12..445 | 6..398 | 200 | 24.8 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2628..2947 | 20..314 | 193 | 23 | Plus |
CG13492-PD | 2979 | CG13492-PD | 108..524 | 25..395 | 156 | 21.5 | Plus |
Translation from 55 to 1332
> GH09876.pep MREYSLCMIVIAAFIASQLDSTSALQCYSCTSTTNDTGNCLTSPSTQTSI ECDNECYTLINAGTLTRGCLINGTACTLPSCSTCKEDNCNLNLVCQQCLG EANCATTNVTDTQYNAVCPNNGQVCVNQLNDNKTVTRQCGDPCAAGTEST CSSCSASLCNVGLFPANRRQCYNCSGENCNAVSNTLVAGCSQIDAGCFTT GTSASNMTRGCTSATTEIKCASDSTDPSCLVCNSDFCNSPTYEREAGSCI ICENCAEQQVATNAKSCGQAKYNQEVGCYTMTSGTNVTRGCLNTLEAGCS TTNACTSCSENGCNVAAGEFQCITCISNEVSGCWSAKYPDTLPLINCPNG TCYSGVWNELGVRGCFTAASHLMQYQCNAKVEAHQCELCTESKCNKVPFN GAGALRNVGVVGLLTGVVIALRSAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14641-PA | 285 | GF14641-PA | 26..285 | 170..425 | 308 | 35.6 | Plus |
Dana\GF14641-PA | 285 | GF14641-PA | 1..182 | 1..174 | 215 | 40.3 | Plus |
Dana\GF11615-PA | 2988 | GF11615-PA | 2426..2731 | 59..327 | 162 | 28.8 | Plus |
Dana\GF11615-PA | 2988 | GF11615-PA | 2017..2227 | 125..326 | 155 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20742-PA | 2978 | GG20742-PA | 2266..2537 | 131..399 | 153 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11596-PA | 421 | GH11596-PA | 1..421 | 1..425 | 588 | 37.3 | Plus |
Dgri\GH20775-PA | 2920 | GH20775-PA | 2219..2480 | 143..399 | 161 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10650-PB | 425 | CG10650-PB | 1..425 | 1..425 | 2339 | 100 | Plus |
CG10650-PA | 425 | CG10650-PA | 1..425 | 1..425 | 2339 | 100 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2134..2536 | 25..397 | 268 | 25.9 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1291..1703 | 25..403 | 266 | 25.1 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2414..2790 | 56..397 | 252 | 25.8 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2555..2965 | 25..421 | 245 | 24.1 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1963..2372 | 27..395 | 233 | 24.1 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1202..1613 | 25..395 | 227 | 24.6 | Plus |
CG13492-PD | 2979 | CG13492-PD | 1716..2116 | 25..397 | 222 | 23.2 | Plus |
CG13492-PD | 2979 | CG13492-PD | 453..849 | 25..395 | 217 | 24.9 | Plus |
CG15773-PA | 478 | CG15773-PA | 30..363 | 92..396 | 216 | 25.9 | Plus |
CG13492-PD | 2979 | CG13492-PD | 866..1273 | 22..397 | 212 | 24.3 | Plus |
CG15773-PB | 319 | CG15773-PB | 30..315 | 92..354 | 211 | 27.4 | Plus |
CG15773-PA | 478 | CG15773-PA | 12..445 | 6..398 | 200 | 24.8 | Plus |
CG13492-PD | 2979 | CG13492-PD | 2628..2947 | 20..314 | 193 | 23 | Plus |
CG15170-PB | 560 | CG15170-PB | 43..310 | 95..338 | 175 | 22.9 | Plus |
CG15170-PA | 561 | CG15170-PA | 44..311 | 95..338 | 175 | 22.9 | Plus |
CG15170-PB | 560 | CG15170-PB | 224..513 | 53..318 | 172 | 22.7 | Plus |
CG15170-PA | 561 | CG15170-PA | 225..514 | 53..318 | 172 | 22.7 | Plus |
CG13492-PD | 2979 | CG13492-PD | 108..524 | 25..395 | 156 | 21.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17165-PA | 402 | GI17165-PA | 29..389 | 61..410 | 520 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19619-PA | 422 | GL19619-PA | 10..404 | 9..406 | 916 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10468-PA | 422 | GA10468-PA | 10..404 | 9..406 | 926 | 50.5 | Plus |
Dpse\GA13948-PA | 549 | GA13948-PA | 178..415 | 151..368 | 160 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17043-PA | 425 | GM17043-PA | 1..425 | 1..425 | 1914 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21791-PA | 425 | GD21791-PA | 1..425 | 1..425 | 1932 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17670-PA | 424 | GJ17670-PA | 1..424 | 1..425 | 576 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23784-PA | 419 | GK23784-PA | 1..415 | 1..419 | 656 | 39.7 | Plus |
Dwil\GK15649-PA | 2984 | GK15649-PA | 2266..2546 | 122..399 | 161 | 28.2 | Plus |
Dwil\GK15649-PA | 2984 | GK15649-PA | 1865..2135 | 143..409 | 159 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12685-PA | 426 | GE12685-PA | 1..426 | 1..425 | 1675 | 76.8 | Plus |