BDGP Sequence Production Resources |
Search the DGRC for GH09946
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 99 |
Well: | 46 |
Vector: | pOT2 |
Associated Gene/Transcript | GLaz-RB |
Protein status: | GH09946.pep: gold |
Preliminary Size: | 1007 |
Sequenced Size: | 865 |
Gene | Date | Evidence |
---|---|---|
CG4604 | 2001-01-01 | Release 2 assignment |
CG4604 | 2002-06-11 | Blastp of sequenced clone |
CG4604 | 2003-01-01 | Sim4 clustering to Release 3 |
GLaz | 2008-04-29 | Release 5.5 accounting |
GLaz | 2008-08-15 | Release 5.9 accounting |
GLaz | 2008-12-18 | 5.12 accounting |
865 bp (865 high quality bases) assembled on 2002-06-11
GenBank Submission: AY070838
> GH09946.complete CCGCCTAAAGTGCCAAATATTCAAAGTGAACTATCAGAAGCAACCATGAT GAGTGGCCAGCCACTTGGCTCGAGGGTTTGGCTGTTGTCCGGAGTGCTAT TAGTGACATTTGCTGGGACAGATGCCTACGGATTTGGACGTTGCCCGAAT TATCCATCGATGCCAAAGTTTAACATGAGTCGGGTCCTTGGACACTGGTA CGAGGTAGAGCGCTCTTTTTACCTTCCGGAAATCGCCTCCGGATGCACCA CCTTTCAGTTTGAGCCGTACAACAAGGGCGAACAATCGAAGTTTTCCAAT TTCAAGCTGGCTGTGGCCATTAAAAACATTAATCGCATAACTGGTAATCC GAATGTGAACATTGGCTATGCAACACCAGAAAACAGCCGATCCTCCATCA TGGATTTTAAGTTTACCACCCGATTTCCGGACGTGATTGCCCGACTACTG CCAGGTTCCGGAAAGTACCAGGTGCTATACACAGACTACGAGAACTTCGC CATCTTGTGGTCCTGCGGCAGCATTGGCTCACTGGGTCACTCCGATCAGA TCTGGATTCTTGGACGTGATCGGGACTTCGAGGTGGATATCCGATCCAAA GTGTACGACGTGTTGAAGCGGCTCTCTCTGGATCCGGAAAGGCTCATCAT CAGCAAAAACAAACAATGCCCCGAGGCGCTGTAGGAAGCTCCTCCAGCGT CTCATCCCCCATCTATATGTTTAAGTTCATTCGGTTAAGGAACAAATTAC ATTTGATGCCTAATCAATTAGGCTGCTGTGATATCGAGGAGTGTGAATCG GCGGAGAGAGGCGAAGCAACGCAAATACAGAAACAAAAAACAAGAGTAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 9051387..9051824 | 847..410 | 2145 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 9053756..9053940 | 185..1 | 910 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 9052010..9052165 | 338..183 | 780 | 100 | Minus |
chr2R | 21145070 | chr2R | 9051879..9051951 | 411..339 | 365 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 13164052..13164491 | 849..410 | 2200 | 100 | Minus |
2R | 25286936 | 2R | 13166422..13166606 | 185..1 | 925 | 100 | Minus |
2R | 25286936 | 2R | 13164677..13164832 | 338..183 | 780 | 100 | Minus |
2R | 25286936 | 2R | 13164546..13164618 | 411..339 | 365 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 13165251..13165690 | 849..410 | 2200 | 100 | Minus |
2R | 25260384 | 2R | 13167621..13167805 | 185..1 | 925 | 100 | Minus |
2R | 25260384 | 2R | 13165876..13166031 | 338..183 | 780 | 100 | Minus |
2R | 25260384 | 2R | 13165745..13165817 | 411..339 | 365 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9053758..9053940 | 1..183 | 99 | Minus | |
chr2R | 9051387..9051822 | 412..847 | 99 | <- | Minus |
chr2R | 9051879..9051951 | 339..411 | 100 | <- | Minus |
chr2R | 9052010..9052164 | 184..338 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GLaz-RA | 1..639 | 46..684 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GLaz-RA | 1..639 | 46..684 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GLaz-RD | 1..639 | 46..684 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GLaz-RA | 1..639 | 46..684 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GLaz-RD | 1..639 | 46..684 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GLaz-RA | 1..845 | 1..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GLaz-RA | 1..847 | 1..847 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GLaz-RD | 177..1023 | 1..847 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GLaz-RA | 1..845 | 1..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GLaz-RD | 177..1023 | 1..847 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13164677..13164831 | 184..338 | 100 | <- | Minus |
2R | 13166424..13166606 | 1..183 | 100 | Minus | |
2R | 13164054..13164489 | 412..847 | 100 | <- | Minus |
2R | 13164546..13164618 | 339..411 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13164677..13164831 | 184..338 | 100 | <- | Minus |
2R | 13166424..13166606 | 1..183 | 100 | Minus | |
2R | 13164054..13164489 | 412..847 | 100 | <- | Minus |
2R | 13164546..13164618 | 339..411 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13164677..13164831 | 184..338 | 100 | <- | Minus |
2R | 13166424..13166606 | 1..183 | 100 | Minus | |
2R | 13164054..13164489 | 412..847 | 100 | <- | Minus |
2R | 13164546..13164618 | 339..411 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9051559..9051994 | 412..847 | 100 | <- | Minus |
arm_2R | 9052051..9052123 | 339..411 | 100 | <- | Minus |
arm_2R | 9052182..9052336 | 184..338 | 100 | <- | Minus |
arm_2R | 9053929..9054111 | 1..183 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13165253..13165688 | 412..847 | 100 | <- | Minus |
2R | 13165745..13165817 | 339..411 | 100 | <- | Minus |
2R | 13165876..13166030 | 184..338 | 100 | <- | Minus |
2R | 13167623..13167805 | 1..183 | 100 | Minus |
Translation from 1 to 683
> GH09946.hyp PPKVPNIQSELSEATMMSGQPLGSRVWLLSGVLLVTFAGTDAYGFGRCPN YPSMPKFNMSRVLGHWYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSN FKLAVAIKNINRITGNPNVNIGYATPENSRSSIMDFKFTTRFPDVIARLL PGSGKYQVLYTDYENFAILWSCGSIGSLGHSDQIWILGRDRDFEVDIRSK VYDVLKRLSLDPERLIISKNKQCPEAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GLaz-PF | 212 | CG4604-PF | 1..212 | 16..227 | 1128 | 100 | Plus |
GLaz-PE | 212 | CG4604-PE | 1..212 | 16..227 | 1128 | 100 | Plus |
GLaz-PD | 212 | CG4604-PD | 1..212 | 16..227 | 1128 | 100 | Plus |
GLaz-PC | 212 | CG4604-PC | 1..212 | 16..227 | 1128 | 100 | Plus |
GLaz-PB | 212 | CG4604-PB | 1..212 | 16..227 | 1128 | 100 | Plus |
Translation from 45 to 683
> GH09946.pep MMSGQPLGSRVWLLSGVLLVTFAGTDAYGFGRCPNYPSMPKFNMSRVLGH WYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNFKLAVAIKNINRITG NPNVNIGYATPENSRSSIMDFKFTTRFPDVIARLLPGSGKYQVLYTDYEN FAILWSCGSIGSLGHSDQIWILGRDRDFEVDIRSKVYDVLKRLSLDPERL IISKNKQCPEAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11979-PA | 213 | GF11979-PA | 1..213 | 1..212 | 1028 | 90.1 | Plus |
Dana\GF14723-PA | 225 | GF14723-PA | 10..195 | 10..210 | 170 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22523-PA | 212 | GG22523-PA | 1..212 | 1..212 | 1108 | 97.2 | Plus |
Dere\GG24593-PA | 217 | GG24593-PA | 7..191 | 9..209 | 153 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21588-PA | 214 | GH21588-PA | 27..212 | 25..210 | 887 | 84.9 | Plus |
Dgri\GH10331-PA | 242 | GH10331-PA | 54..216 | 31..210 | 162 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GLaz-PF | 212 | CG4604-PF | 1..212 | 1..212 | 1128 | 100 | Plus |
GLaz-PE | 212 | CG4604-PE | 1..212 | 1..212 | 1128 | 100 | Plus |
GLaz-PD | 212 | CG4604-PD | 1..212 | 1..212 | 1128 | 100 | Plus |
GLaz-PC | 212 | CG4604-PC | 1..212 | 1..212 | 1128 | 100 | Plus |
GLaz-PB | 212 | CG4604-PB | 1..212 | 1..212 | 1128 | 100 | Plus |
GLaz-PA | 212 | CG4604-PA | 1..212 | 1..212 | 1128 | 100 | Plus |
NLaz-PC | 224 | CG33126-PC | 31..192 | 31..209 | 153 | 26.3 | Plus |
NLaz-PA | 224 | CG33126-PA | 31..192 | 31..209 | 153 | 26.3 | Plus |
NLaz-PB | 245 | CG33126-PB | 31..192 | 31..209 | 153 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19559-PA | 215 | GI19559-PA | 26..213 | 23..210 | 873 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10843-PA | 216 | GL10843-PA | 16..216 | 13..212 | 1004 | 93 | Plus |
Dper\GL14838-PA | 228 | GL14838-PA | 12..195 | 1..210 | 183 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18293-PA | 216 | GA18293-PA | 16..216 | 13..212 | 1006 | 93.5 | Plus |
Dpse\GA25349-PA | 228 | GA25349-PA | 12..195 | 1..210 | 176 | 27.6 | Plus |
Dpse\GA22440-PA | 188 | GA22440-PA | 1..155 | 39..210 | 162 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20309-PA | 212 | GM20309-PA | 1..212 | 1..212 | 1134 | 99.5 | Plus |
Dsec\GM16611-PA | 224 | GM16611-PA | 31..192 | 31..209 | 165 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18610-PA | 115 | GD18610-PA | 1..115 | 98..212 | 608 | 99.1 | Plus |
Dsim\GD22910-PA | 224 | GD22910-PA | 31..192 | 31..209 | 164 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21134-PA | 214 | GJ21134-PA | 27..212 | 25..210 | 870 | 83.3 | Plus |
Dvir\GJ10789-PA | 216 | GJ10789-PA | 3..190 | 5..210 | 200 | 29.1 | Plus |