BDGP Sequence Production Resources |
Search the DGRC for GH09983
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 99 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | dj-1beta-RA |
Protein status: | GH09983.pep: gold |
Preliminary Size: | 897 |
Sequenced Size: | 742 |
Gene | Date | Evidence |
---|---|---|
CG1408 | 2001-01-01 | Release 2 assignment |
CG15544 | 2001-01-01 | Release 2 assignment |
CG11316 | 2001-01-01 | Release 2 assignment |
CG1349 | 2001-01-01 | Release 2 assignment |
CG1349 | 2001-10-10 | Blastp of sequenced clone |
CG1349 | 2003-01-01 | Sim4 clustering to Release 3 |
dj-1beta | 2008-04-29 | Release 5.5 accounting |
dj-1beta | 2008-08-15 | Release 5.9 accounting |
dj-1beta | 2008-12-18 | 5.12 accounting |
742 bp (742 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060670
> GH09983.complete ATAAGCTATCGTATCTGCATGGTTTTCTTTGGATTTCCTCAAATTTCAAG GCACTTTTCTAAGTTTACCAAGATGTCGAAAAGCGCGCTGGTGATTTTGG CTCCCGGAGCGGAGGAGATGGAGTTCATCATAGCCGCCGACGTTCTGAGA AGGGCGGGCATCAAGGTCACCGTAGCCGGTTTGAATGGCGGGGAAGCGGT GAAGTGCTCGCGGGATGTGCAGATCCTGCCGGACACCTCGCTGGCCCAGG TTGCCTCGGATAAGTTCGATGTGGTGGTGCTGCCCGGCGGACTGGGTGGC TCCAATGCCATGGGGGAGTCCTCGCTGGTCGGTGACTTGCTGCGCAGCCA GGAGTCTGGTGGCGGACTCATCGCCGCCATCTGTGCCGCGCCCACCGTTT TGGCCAAGCACGGCGTCGCCTCCGGGAAATCCCTCACCTCGTATCCCTCA ATGAAGCCCCAGCTGGTGAATAACTATAGCTATGTGGACGACAAGACGGT GGTCAAGGATGGCAATCTGATCACCAGTCGAGGTCCTGGCACCGCCTACG AGTTCGCCCTCAAAATCGCCGAGGAGCTGGCGGGCAAGGAGAAAGTCCAG GAGGTGGCCAAGGGTCTTCTTGTGGCCTACAACTAACATATTTACACTTA TTTATGAAAACAGATTGTTTCAAGAGCAACTCATGCAAACAACAACTGAA TTAAAATAAAATTATTCAAGACAGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dj-1beta-RA | 1069 | dj-1beta-RA | 129..854 | 1..726 | 3630 | 100 | Plus |
dj-1beta.a | 928 | dj-1beta.a | 2..466 | 1..465 | 2325 | 100 | Plus |
dj-1beta.a | 928 | dj-1beta.a | 466..713 | 479..726 | 1240 | 100 | Plus |
DJ-1alpha.a | 728 | DJ-1alpha.a | 378..505 | 338..465 | 175 | 75.7 | Plus |
DJ-1alpha.a | 728 | DJ-1alpha.a | 519..574 | 487..542 | 160 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 26629781..26630104 | 160..483 | 1605 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 26630165..26630411 | 478..724 | 1235 | 100 | Plus |
chr3R | 27901430 | chr3R | 26629559..26629717 | 1..159 | 795 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 30807348..30807671 | 160..483 | 1605 | 99.7 | Plus |
3R | 32079331 | 3R | 30807732..30807980 | 478..726 | 1245 | 100 | Plus |
3R | 32079331 | 3R | 30807126..30807284 | 1..159 | 795 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 30548179..30548502 | 160..483 | 1605 | 99.6 | Plus |
3R | 31820162 | 3R | 30548563..30548811 | 478..726 | 1245 | 100 | Plus |
3R | 31820162 | 3R | 30547957..30548115 | 1..159 | 795 | 100 | Plus |
2R | 25260384 | 2R | 13944020..13944147 | 465..338 | 175 | 75.7 | Minus |
2R | 25260384 | 2R | 13943887..13943942 | 542..487 | 160 | 85.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy3 | 6973 | gypsy3 GYPSY3 6973bp | 1025..1080 | 649..706 | 114 | 69 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 26629559..26629717 | 1..159 | 100 | -> | Plus |
chr3R | 26629781..26630100 | 160..479 | 100 | -> | Plus |
chr3R | 26630167..26630411 | 480..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dj-1beta-RA | 1..618 | 19..636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dj-1beta-RA | 1..618 | 19..636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dj-1beta-RA | 1..618 | 19..636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dj-1beta-RA | 1..618 | 19..636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dj-1beta-RA | 1..618 | 19..636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dj-1beta-RA | 1..724 | 1..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dj-1beta-RA | 1..724 | 1..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dj-1beta-RA | 10..733 | 1..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dj-1beta-RA | 1..724 | 1..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dj-1beta-RA | 10..733 | 1..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30807348..30807667 | 160..479 | 100 | -> | Plus |
3R | 30807734..30807978 | 480..724 | 100 | Plus | |
3R | 30807126..30807284 | 1..159 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30807348..30807667 | 160..479 | 100 | -> | Plus |
3R | 30807734..30807978 | 480..724 | 100 | Plus | |
3R | 30807126..30807284 | 1..159 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30807348..30807667 | 160..479 | 100 | -> | Plus |
3R | 30807734..30807978 | 480..724 | 100 | Plus | |
3R | 30807126..30807284 | 1..159 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 26632848..26633006 | 1..159 | 100 | -> | Plus |
arm_3R | 26633070..26633389 | 160..479 | 100 | -> | Plus |
arm_3R | 26633456..26633700 | 480..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30548179..30548498 | 160..479 | 100 | -> | Plus |
3R | 30548565..30548809 | 480..724 | 100 | Plus | |
3R | 30547957..30548115 | 1..159 | 100 | -> | Plus |
Translation from 1 to 635
> GH09983.hyp ISYRICMVFFGFPQISRHFSKFTKMSKSALVILAPGAEEMEFIIAADVLR RAGIKVTVAGLNGGEAVKCSRDVQILPDTSLAQVASDKFDVVVLPGGLGG SNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLAKHGVASGKSLTSYPS MKPQLVNNYSYVDDKTVVKDGNLITSRGPGTAYEFALKIAEELAGKEKVQ EVAKGLLVAYN*
Translation from 18 to 635
> GH09983.pep MVFFGFPQISRHFSKFTKMSKSALVILAPGAEEMEFIIAADVLRRAGIKV TVAGLNGGEAVKCSRDVQILPDTSLAQVASDKFDVVVLPGGLGGSNAMGE SSLVGDLLRSQESGGGLIAAICAAPTVLAKHGVASGKSLTSYPSMKPQLV NNYSYVDDKTVVKDGNLITSRGPGTAYEFALKIAEELAGKEKVQEVAKGL LVAYN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22924-PA | 188 | GF22924-PA | 1..188 | 19..205 | 802 | 83 | Plus |
Dana\GF11154-PA | 173 | GF11154-PA | 1..171 | 34..204 | 551 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11777-PA | 187 | GG11777-PA | 1..187 | 19..205 | 880 | 89.3 | Plus |
Dere\GG22458-PA | 217 | GG22458-PA | 9..216 | 6..205 | 648 | 61.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22956-PA | 189 | GH22956-PA | 1..188 | 19..205 | 739 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dj-1beta-PB | 187 | CG1349-PB | 1..187 | 19..205 | 921 | 100 | Plus |
DJ-1alpha-PA | 217 | CG6646-PA | 18..215 | 8..204 | 622 | 64.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18446-PA | 226 | GI18446-PA | 41..226 | 21..205 | 714 | 73.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13517-PA | 187 | GL13517-PA | 1..187 | 19..205 | 824 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12322-PA | 187 | GA12322-PA | 1..187 | 19..205 | 824 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12907-PA | 187 | GM12907-PA | 1..187 | 19..205 | 947 | 98.9 | Plus |
Dsec\GM20244-PA | 217 | GM20244-PA | 18..216 | 8..205 | 659 | 64.8 | Plus |
Dsec\GM23255-PA | 217 | GM23255-PA | 18..216 | 8..205 | 659 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21547-PA | 187 | GD21547-PA | 1..187 | 19..205 | 922 | 96.8 | Plus |
Dsim\GD25730-PA | 218 | GD25730-PA | 9..216 | 6..204 | 649 | 62 | Plus |
Dsim\GD13461-PA | 218 | GD13461-PA | 19..216 | 8..204 | 631 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21531-PA | 188 | GJ21531-PA | 1..188 | 19..205 | 752 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17852-PA | 189 | GK17852-PA | 1..186 | 19..204 | 747 | 77.4 | Plus |