Clone GH10029 Report

Search the DGRC for GH10029

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:100
Well:29
Vector:pOT2
Associated Gene/TranscriptCG32549-RC
Protein status:GH10029.pep: wuzgold
Preliminary Size:1898
Sequenced Size:1915

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6247 2001-01-01 Release 2 assignment
CG32549 2001-07-04 Blastp of sequenced clone
CG32549 2003-01-01 Sim4 clustering to Release 3
CG32549 2008-04-29 Release 5.5 accounting
CG32549 2008-08-15 Release 5.9 accounting
CG32549 2008-12-18 5.12 accounting

Clone Sequence Records

GH10029.complete Sequence

1915 bp (1915 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051424

> GH10029.complete
CTTGGCAGAGTACAAGTCACCGCAGTATGAGCAGCTGGGCTTCAACCTGG
TCAAGGAGCGCCTGGTCTTCATGGGCTACCCCAAGGAGATCCTGCAGTTC
GAGTACGATCCCACCTTCCCAGTACGCGGCCTGTGGTTCGACACTCTCTA
CGGGAATCTGCTGAAAGTGGATGCCTACGGCAACATCCTGGTCTGCGTTC
ATGGCTTCGAGTTCATCAAACATCACCAGGTGTACGAGTTGTATCCCAAC
AAGTTCTTGAAACTGGACGAGTCGCGTGTCTATGTCCTGAATACTCTCTT
CAATCTTCCTGAAACCTATCTCCTTGCCTGTCTCGTCGACTTCCTAACCA
ACAGCAGCGACTTTGTGCGCGTTGAGCGCGGCATCAAAGCTGGCGATTTA
CTTTTTACCTACAAGTCGATTTTCCAGGATGTGCGACGTGCCGTCGACTG
GGTGCATTCCGATGGCGATCTGAAGCGTCGCACCACTCAGAATATGGCTC
ACTATGTGAAGAAGGACGAGCGTTTGCCCACGGTCCTTTCGCGAATCCGG
GAGTCGGGCGCCAAACTCTTTATGCTGACCAACAGCGACTATACGTACAC
CAACGAGATCATGACCTACCTGTTTGATTTCCCCCATGGCGCCACTCCGG
ATGAGCCGCATCGCGACTGGAAGACCTACTTCGATGTGATCGTGGTGGAT
GCCCGCAAGCCGCTCTTCTTCGACGAGGGCACCGTGCTGCGGCAGGTGGA
CACGAAGACCGGAAGCCTGAAGATCGGCACACACGTTGGACCCCTGCAGC
CGGGTCAGGTTTATTCCGGTGGCTCCTGCGAGCTCTTTACCAAGTTCATC
AATGCCAAAGGCAAGGACGTGCTCTATGTGGGCGATCACATTTTTGGCGA
TATTCTCAAATCGAAGAAGATTCGAGGCTGGCGCACCTTCCTAATTGTGC
CCGAATTGGTGAGGGAGCTGCACGTTTGGACGGATGAGTGCCAGCTGTTT
GCGGAGCTACAGAACCTGGACATCAAGCTGGGCGACCTGTACAGGGATCT
CGACTCGAGTGCCAAGGTCAAGCCGGACATTTCGCAGCTGCGCACGTGCA
TCCGCGATGTGACACACAAGATGGACATGTCCTACGGTATGATGGGCTCA
CTCTTCCGCTCCGGCTCGCGCCAGACCTTCTTCTCCAGCCAGGTGGTGCG
ATATGCCGACGTCTATGCGGCCACCCTGCTCAACCTCATTTACTACCCAT
TCTCGTATATGTTCCGAGCTCCGGCCATGCTTCTGCCCCATGAGTCGACG
GTGGCCCATGATCAGGCCCATCAGCCGCCTCCGCCACTGGGCCCTGTTCC
TGTTCCGGCTACGGGAGCCGCATCGGTGGCTGCCTCGCCGGATGAGCCGG
CTCGCATTTTGGCGGGCACCGCCGAGCACGTTAAGGACCCCAAGGACTTG
CATCGCGCAAGCTCCATTGTGCACACTCGTCCGTCGACGCCCACCGTGGT
GACCCACACCCATGACGAGGACTATTCCGAGGAGGAGGAGACACCCAGTG
GTGCCGAGTCTTCCACAGAGGCTGTGCGCGATGCCTCCGAAGACTAGATG
ATGCCACAGCCGCCCTTCTGGAATGGAATGTTTGGATCAACGAATTTTAT
TCTCAAACTTCCCCAATGCCCCCATTAGCCTTGCAAACCCTTACCCGAAA
TCCACACCGTGGTCGAAGCAATTATGAAACGTACGATTTTCCCTGGCGAT
TTTACCCAAGCACAGATATGTGAAACTATATACCATAACCGATATATATA
TATATACATTATACATTATAAATTAGCTGGTTCCATACATATAATGTGTC
TTTTTTTTTTAAAAATGAAAACCATAAATTGCTGTAATTGAATGAGAAAA
AAAAAAAAAAAAAAA

GH10029.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:37:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG32549.a 2561 CG32549.a 658..2555 1..1898 9490 100 Plus
CG32549-RB 2782 CG32549-RB 879..2776 1..1898 9490 100 Plus
CG32549-RA 2865 CG32549-RA 962..2859 1..1898 9490 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:53:38
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 18280196..18281166 1459..489 4825 99.8 Minus
chrX 22417052 chrX 18279694..18280130 1896..1460 2185 100 Minus
chrX 22417052 chrX 18281747..18281963 222..6 1085 100 Minus
chrX 22417052 chrX 18281533..18281679 369..223 735 100 Minus
chrX 22417052 chrX 18281238..18281359 490..369 610 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:41:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:53:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18390998..18391968 1459..489 4855 100 Minus
X 23542271 X 18390494..18390932 1898..1460 2195 100 Minus
X 23542271 X 18392549..18392765 222..6 1085 100 Minus
X 23542271 X 18392335..18392481 369..223 735 100 Minus
X 23542271 X 18392040..18392161 490..369 610 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:58:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 18399096..18400066 1459..489 4855 100 Minus
X 23527363 X 18398592..18399030 1898..1460 2195 100 Minus
X 23527363 X 18400647..18400863 222..6 1085 100 Minus
X 23527363 X 18400433..18400579 369..223 735 100 Minus
X 23527363 X 18400138..18400259 490..369 610 100 Minus
Blast to na_te.dros performed on 2019-03-16 03:53:37 has no hits.

GH10029.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:54:14 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 18281533..18281679 223..369 100 <- Minus
chrX 18279694..18280130 1460..1896 100 <- Minus
chrX 18280196..18281164 491..1459 99 <- Minus
chrX 18281238..18281358 370..490 100 <- Minus
chrX 18281747..18281967 1..222 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:32:03 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RA 552..2148 1..1597 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:28:15 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RA 552..2148 1..1597 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:08:19 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RF 243..1839 1..1597 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:01:35 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RA 552..2148 1..1597 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:19:11 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RF 243..1839 1..1597 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:28:06 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RA 962..2857 1..1896 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:28:15 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RA 962..2857 1..1896 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:08:19 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RD 417..2310 1..1894 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:01:35 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RA 962..2857 1..1896 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:19:11 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RD 417..2310 1..1894 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:54:14 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
X 18392040..18392160 370..490 100 <- Minus
X 18392335..18392481 223..369 100 <- Minus
X 18392549..18392769 1..222 98   Minus
X 18390496..18390932 1460..1896 100 <- Minus
X 18390998..18391966 491..1459 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:54:14 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
X 18392040..18392160 370..490 100 <- Minus
X 18392335..18392481 223..369 100 <- Minus
X 18392549..18392769 1..222 98   Minus
X 18390496..18390932 1460..1896 100 <- Minus
X 18390998..18391966 491..1459 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:54:14 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
X 18392040..18392160 370..490 100 <- Minus
X 18392335..18392481 223..369 100 <- Minus
X 18392549..18392769 1..222 98   Minus
X 18390496..18390932 1460..1896 100 <- Minus
X 18390998..18391966 491..1459 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:08:19 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18284529..18284965 1460..1896 100 <- Minus
arm_X 18285031..18285999 491..1459 100 <- Minus
arm_X 18286073..18286193 370..490 100 <- Minus
arm_X 18286368..18286514 223..369 100 <- Minus
arm_X 18286582..18286802 1..222 98   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:39:30 Download gff for GH10029.complete
Subject Subject Range Query Range Percent Splice Strand
X 18398594..18399030 1460..1896 100 <- Minus
X 18399096..18400064 491..1459 100 <- Minus
X 18400138..18400258 370..490 100 <- Minus
X 18400433..18400579 223..369 100 <- Minus
X 18400647..18400867 1..222 98   Minus

GH10029.hyp Sequence

Translation from 1 to 1596

> GH10029.hyp
RTEYKSPQYEQLGFNLVKERLVFMGYPKEILQFEYDPTFPVRGLWFDTLY
GNLLKVDAYGNILVCVHGFEFIKHHQVYELYPNKFLKLDESRVYVLNTLF
NLPETYLLACLVDFLTNSSDFVRVERGIKAGDLLFTYKSIFQDVRRAVDW
VHSDGDLKRRTTQNMAHYVKKDERLPTVLSRIRESGAKLFMLTNSDYTYT
NEIMTYLFDFPHGATPDEPHRDWKTYFDVIVVDARKPLFFDEGTVLRQVD
TKTGSLKIGTHVGPLQPGQVYSGGSCELFTKFINAKGKDVLYVGDHIFGD
ILKSKKIRGWRTFLIVPELVRELHVWTDECQLFAELQNLDIKLGDLYRDL
DSSAKVKPDISQLRTCIRDVTHKMDMSYGMMGSLFRSGSRQTFFSSQVVR
YADVYAATLLNLIYYPFSYMFRAPAMLLPHESTVAHDQAHQPPPPLGPVP
VPATGAASVAASPDEPARILAGTAEHVKDPKDLHRASSIVHTRPSTPTVV
THTHDEDYSEEEETPSGAESSTEAVRDASED*

GH10029.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:50:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG32549-PH 709 CG32549-PH 181..709 3..531 2798 100 Plus
CG32549-PG 709 CG32549-PG 181..709 3..531 2798 100 Plus
CG32549-PF 612 CG32549-PF 84..612 3..531 2798 100 Plus
CG32549-PB 612 CG32549-PB 84..612 3..531 2798 100 Plus
CG32549-PE 630 CG32549-PE 102..630 3..531 2798 100 Plus

GH10029.pep Sequence

Translation from 70 to 1596

> GH10029.pep
MGYPKEILQFEYDPTFPVRGLWFDTLYGNLLKVDAYGNILVCVHGFEFIK
HHQVYELYPNKFLKLDESRVYVLNTLFNLPETYLLACLVDFLTNSSDFVR
VERGIKAGDLLFTYKSIFQDVRRAVDWVHSDGDLKRRTTQNMAHYVKKDE
RLPTVLSRIRESGAKLFMLTNSDYTYTNEIMTYLFDFPHGATPDEPHRDW
KTYFDVIVVDARKPLFFDEGTVLRQVDTKTGSLKIGTHVGPLQPGQVYSG
GSCELFTKFINAKGKDVLYVGDHIFGDILKSKKIRGWRTFLIVPELVREL
HVWTDECQLFAELQNLDIKLGDLYRDLDSSAKVKPDISQLRTCIRDVTHK
MDMSYGMMGSLFRSGSRQTFFSSQVVRYADVYAATLLNLIYYPFSYMFRA
PAMLLPHESTVAHDQAHQPPPPLGPVPVPATGAASVAASPDEPARILAGT
AEHVKDPKDLHRASSIVHTRPSTPTVVTHTHDEDYSEEEETPSGAESSTE
AVRDASED*

GH10029.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:14:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22508-PA 378 GF22508-PA 74..364 1..294 1506 95.2 Plus
Dana\GF21341-PA 558 GF21341-PA 157..552 3..408 410 27.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:14:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18126-PA 713 GG18126-PA 207..713 1..508 2654 97.8 Plus
Dere\GG24086-PA 547 GG24086-PA 146..541 3..408 414 27.3 Plus
Dere\GG14610-PA 534 GG14610-PA 148..452 2..299 188 25.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:14:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12351-PA 611 GH12351-PA 108..611 1..508 2386 89.2 Plus
Dgri\GH19932-PA 539 GH19932-PA 138..533 3..408 413 28.3 Plus
Dgri\GH16005-PA 445 GH16005-PA 50..354 3..296 186 26.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG32549-PH 709 CG32549-PH 202..709 1..508 2689 100 Plus
CG32549-PG 709 CG32549-PG 202..709 1..508 2689 100 Plus
CG32549-PF 612 CG32549-PF 105..612 1..508 2689 100 Plus
CG32549-PB 612 CG32549-PB 105..612 1..508 2689 100 Plus
CG32549-PE 630 CG32549-PE 123..630 1..508 2689 100 Plus
CG32549-PD 581 CG32549-PD 74..581 1..508 2689 100 Plus
CG1814-PB 409 CG1814-PB 8..403 3..408 410 27.7 Plus
CG1814-PC 462 CG1814-PC 61..456 3..408 410 27.7 Plus
CG1814-PA 548 CG1814-PA 147..542 3..408 410 27.7 Plus
CG2277-PC 435 CG2277-PC 49..353 2..299 189 24.8 Plus
CG2277-PB 534 CG2277-PB 148..452 2..299 189 24.8 Plus
CG2277-PA 534 CG2277-PA 148..452 2..299 189 24.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:14:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15598-PA 639 GI15598-PA 122..616 1..485 2335 90.1 Plus
Dmoj\GI19889-PA 537 GI19889-PA 136..531 3..408 405 27.3 Plus
Dmoj\GI12272-PA 444 GI12272-PA 49..355 2..296 199 26.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:14:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27036-PA 510 GL27036-PA 44..497 40..499 2081 85.7 Plus
Dper\GL17171-PA 499 GL17171-PA 98..493 3..408 402 28.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:14:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22323-PA 576 GA22323-PA 72..563 1..499 2428 90.6 Plus
Dpse\GA25020-PB 551 GA25020-PB 150..545 3..408 407 28.2 Plus
Dpse\GA25020-PC 409 GA25020-PC 8..403 3..408 402 28.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:14:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22819-PA 637 GM22819-PA 131..637 1..508 2702 99.2 Plus
Dsec\GM21134-PA 481 GM21134-PA 147..433 3..300 342 29 Plus
Dsec\GM14224-PA 532 GM14224-PA 146..450 2..299 192 25.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:14:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15638-PA 403 GD15638-PA 50..403 1..354 1893 98.9 Plus
Dsim\GD10664-PA 548 GD10664-PA 147..542 3..408 414 27.5 Plus
Dsim\GD13486-PA 534 GD13486-PA 148..452 2..299 199 25.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:14:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15201-PA 634 GJ15201-PA 97..634 1..508 2382 84.6 Plus
Dvir\GJ15059-PA 538 GJ15059-PA 137..532 3..408 405 27.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:14:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25265-PA 607 GK25265-PA 106..607 1..507 2417 90.3 Plus
Dwil\GK21823-PA 537 GK21823-PA 136..531 3..408 405 27.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15532-PA 712 GE15532-PA 206..712 1..508 2659 98 Plus
Dyak\GE19287-PA 547 GE19287-PA 146..541 3..408 409 27 Plus