BDGP Sequence Production Resources |
Search the DGRC for GH10083
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 100 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3823-RA |
Protein status: | GH10083.pep: gold |
Preliminary Size: | 4678 |
Sequenced Size: | 1285 |
Gene | Date | Evidence |
---|---|---|
CG3823 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3823 | 2002-04-22 | Blastp of sequenced clone |
CG3823 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3823 | 2008-04-29 | Release 5.5 accounting |
CG3823 | 2008-08-15 | Release 5.9 accounting |
CG3823 | 2008-12-18 | 5.12 accounting |
1285 bp (1285 high quality bases) assembled on 2002-04-22
GenBank Submission: AY113341
> GH10083.complete ATTAGCGTCGCACAGACGCGGTGTCTCGCTCAAGTGTTCCTTGCTCGCTC CATCTGCTGTCTCGCTCCCTCGCGGAAGTCCGATAGTTTCGATAGCTCGT CCCTGTTTGGCACAACGGTAAACGTATCGAAATGGTCCACCTAAATGAGA AAGCGGAGGATCAGCTGATGACCACAAGGATTTCGGATTTGCAGGATTGG CTGCAGGCGCAGCCACAGTTGCCGCAAAATATATCCCGATTGCTTCTGCG CCGCTTTCTGCACACGACGCGGGGTGATCTATCCGCCGCCCAGCGACTCT TGGAACTGAATTACGGACTGCGTAACAAACATGCACACATCTTCATCGAT CGCGATCCGTTGGATGCCAGTTCCCAGCAGCTACTGCAAGTCGCAGATCT GGTGCCGTTGCCCGGCTTGACCCCGGAGAACAACAAGCTGCTCTTTTACC GCCTCATCGACTTCGATGCGGACAAGTTCAACTTTACGGCTGCCATCAAG GTCTTTTTCATGGTGGCCGACTGTCGATTTGCGACGGAGAACGAGGAGCG TTTGTCGGACGGCGAGATACCAGTTTTCGACATGGCTGGCTATACGCTGC GCCACCTGACCAAAACCGCACTGGGCGCCCTGCGTGTCTACATGAAGTTC GTCCAGGAGGCACATCCCGTACGGCTCAAGGAGATCCACGTGCTCAACTG CCCGTCGTATGTGGACAAGGTGATGGCCGTGGTCAAGCCGTTCATCAAGG GAGAGGTGTTCAAGCTAATCCATTTCCATTTGCCAAATGCGGACACTCCA TATCGGCACTTCCCGCGATCCATGTTGCCGGAGGAATACGGCGGGGAGGC GGGCAAGATGTCCGACCTGAAGCTCCAGTGGATGCAGTTGCTCAAGGAGC AGAGGGATTATCTGATGGATACGGAAAACTGGCAAATAAACAAAATCAAA AAGAATGGCCAACGAAAGTCAAGTGATTCCGGAGTCACAGAAGGTCTACG TTCCCTCGAAATTGATTAGTCGCCGTGCGCACAACTGTACCTTAATTTTT TGAGCCTTCAGCGATTTTTACATATCTTAAACTTTTTACCCTTCAAGTGT ACTGCAAGTGTTATCCAATTGTGGTCAAGACACTTTGGCCAAATTGTGGT GAATGTGAAAATCGGATTAGGCTCGTCTATCTATTGTATTTTTGCTTTGT TCCCGTTTGTTTTCCCAGCTGGGCTTGGGTCTATGTAAATATATATATAT TATATTATATTCTTAACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3823-RA | 1350 | CG3823-RA | 82..1349 | 1..1268 | 6340 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6198064..6198494 | 475..905 | 2095 | 99.1 | Plus |
chrX | 22417052 | chrX | 6198581..6198941 | 903..1267 | 1700 | 98.4 | Plus |
chrX | 22417052 | chrX | 6196190..6196423 | 1..234 | 1170 | 100 | Plus |
chrX | 22417052 | chrX | 6196917..6197076 | 235..394 | 800 | 100 | Plus |
chrX | 22417052 | chrX | 6197884..6197965 | 395..476 | 410 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 6305864..6306294 | 475..905 | 2155 | 100 | Plus |
X | 23542271 | X | 6306381..6306746 | 903..1268 | 1830 | 100 | Plus |
X | 23542271 | X | 6303990..6304223 | 1..234 | 1170 | 100 | Plus |
X | 23542271 | X | 6304717..6304876 | 235..394 | 800 | 100 | Plus |
X | 23542271 | X | 6305684..6305765 | 395..476 | 410 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 6313962..6314392 | 475..905 | 2155 | 100 | Plus |
X | 23527363 | X | 6314479..6314844 | 903..1268 | 1830 | 100 | Plus |
X | 23527363 | X | 6312088..6312321 | 1..234 | 1170 | 100 | Plus |
X | 23527363 | X | 6312815..6312974 | 235..394 | 800 | 100 | Plus |
X | 23527363 | X | 6313782..6313863 | 395..476 | 410 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6196917..6197076 | 235..394 | 100 | -> | Plus |
chrX | 6197884..6197965 | 395..476 | 100 | -> | Plus |
chrX | 6196190..6196423 | 1..234 | 100 | -> | Plus |
chrX | 6198066..6198493 | 477..904 | 99 | -> | Plus |
chrX | 6198583..6198910 | 905..1232 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3823-RA | 1..888 | 132..1019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3823-RA | 1..888 | 132..1019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3823-RA | 1..888 | 132..1019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3823-RA | 1..888 | 132..1019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3823-RA | 1..888 | 132..1019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3823-RA | 1..1267 | 1..1267 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3823-RA | 1..1267 | 1..1267 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3823-RA | 16..1282 | 1..1267 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3823-RA | 1..1267 | 1..1267 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3823-RA | 16..1282 | 1..1267 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6306383..6306745 | 905..1267 | 100 | Plus | |
X | 6303990..6304223 | 1..234 | 100 | -> | Plus |
X | 6304717..6304876 | 235..394 | 100 | -> | Plus |
X | 6305684..6305765 | 395..476 | 100 | -> | Plus |
X | 6305866..6306293 | 477..904 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6306383..6306745 | 905..1267 | 100 | Plus | |
X | 6303990..6304223 | 1..234 | 100 | -> | Plus |
X | 6304717..6304876 | 235..394 | 100 | -> | Plus |
X | 6305684..6305765 | 395..476 | 100 | -> | Plus |
X | 6305866..6306293 | 477..904 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6306383..6306745 | 905..1267 | 100 | Plus | |
X | 6303990..6304223 | 1..234 | 100 | -> | Plus |
X | 6304717..6304876 | 235..394 | 100 | -> | Plus |
X | 6305684..6305765 | 395..476 | 100 | -> | Plus |
X | 6305866..6306293 | 477..904 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6198750..6198909 | 235..394 | 100 | -> | Plus |
arm_X | 6199717..6199798 | 395..476 | 100 | -> | Plus |
arm_X | 6198023..6198256 | 1..234 | 100 | -> | Plus |
arm_X | 6199899..6200326 | 477..904 | 100 | -> | Plus |
arm_X | 6200416..6200778 | 905..1267 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6313782..6313863 | 395..476 | 100 | -> | Plus |
X | 6312088..6312321 | 1..234 | 100 | -> | Plus |
X | 6312815..6312974 | 235..394 | 100 | -> | Plus |
X | 6313964..6314391 | 477..904 | 100 | -> | Plus |
X | 6314481..6314843 | 905..1267 | 100 | Plus |
Translation from 131 to 1018
> GH10083.hyp MVHLNEKAEDQLMTTRISDLQDWLQAQPQLPQNISRLLLRRFLHTTRGDL SAAQRLLELNYGLRNKHAHIFIDRDPLDASSQQLLQVADLVPLPGLTPEN NKLLFYRLIDFDADKFNFTAAIKVFFMVADCRFATENEERLSDGEIPVFD MAGYTLRHLTKTALGALRVYMKFVQEAHPVRLKEIHVLNCPSYVDKVMAV VKPFIKGEVFKLIHFHLPNADTPYRHFPRSMLPEEYGGEAGKMSDLKLQW MQLLKEQRDYLMDTENWQINKIKKNGQRKSSDSGVTEGLRSLEID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3823-PA | 295 | CG3823-PA | 1..295 | 1..295 | 1536 | 100 | Plus |
CG3191-PC | 309 | CG3191-PC | 38..302 | 17..277 | 684 | 46.8 | Plus |
CG3191-PA | 309 | CG3191-PA | 38..302 | 17..277 | 684 | 46.8 | Plus |
CG3091-PC | 303 | CG3091-PC | 25..292 | 16..269 | 589 | 39.9 | Plus |
CG3091-PA | 303 | CG3091-PA | 25..292 | 16..269 | 589 | 39.9 | Plus |
Translation from 131 to 1018
> GH10083.pep MVHLNEKAEDQLMTTRISDLQDWLQAQPQLPQNISRLLLRRFLHTTRGDL SAAQRLLELNYGLRNKHAHIFIDRDPLDASSQQLLQVADLVPLPGLTPEN NKLLFYRLIDFDADKFNFTAAIKVFFMVADCRFATENEERLSDGEIPVFD MAGYTLRHLTKTALGALRVYMKFVQEAHPVRLKEIHVLNCPSYVDKVMAV VKPFIKGEVFKLIHFHLPNADTPYRHFPRSMLPEEYGGEAGKMSDLKLQW MQLLKEQRDYLMDTENWQINKIKKNGQRKSSDSGVTEGLRSLEID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20915-PA | 292 | GF20915-PA | 1..292 | 1..295 | 1323 | 81.4 | Plus |
Dana\GF21968-PA | 304 | GF21968-PA | 24..297 | 8..276 | 719 | 48.2 | Plus |
Dana\GF21967-PA | 300 | GF21967-PA | 21..289 | 14..269 | 617 | 41.3 | Plus |
Dana\GF17713-PA | 308 | GF17713-PA | 34..308 | 20..295 | 392 | 32 | Plus |
Dana\GF23257-PA | 298 | GF23257-PA | 15..298 | 11..295 | 351 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19584-PA | 295 | GG19584-PA | 1..295 | 1..295 | 1534 | 96.3 | Plus |
Dere\GG12633-PA | 309 | GG12633-PA | 38..302 | 17..277 | 694 | 47.2 | Plus |
Dere\GG12632-PA | 305 | GG12632-PA | 25..300 | 14..275 | 611 | 39.5 | Plus |
Dere\GG11035-PA | 308 | GG11035-PA | 34..308 | 20..295 | 393 | 32 | Plus |
Dere\GG11860-PA | 298 | GG11860-PA | 26..298 | 22..295 | 340 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24053-PA | 295 | GH24053-PA | 1..295 | 1..295 | 1217 | 76.8 | Plus |
Dgri\GH12310-PA | 288 | GH12310-PA | 4..282 | 5..278 | 692 | 46.6 | Plus |
Dgri\GH12309-PA | 313 | GH12309-PA | 23..308 | 11..275 | 622 | 40.2 | Plus |
Dgri\GH22617-PA | 308 | GH22617-PA | 34..308 | 20..295 | 388 | 32 | Plus |
Dgri\GH18936-PA | 298 | GH18936-PA | 15..298 | 11..295 | 360 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3823-PA | 295 | CG3823-PA | 1..295 | 1..295 | 1536 | 100 | Plus |
CG3191-PC | 309 | CG3191-PC | 38..302 | 17..277 | 684 | 46.8 | Plus |
CG3191-PA | 309 | CG3191-PA | 38..302 | 17..277 | 684 | 46.8 | Plus |
CG3091-PC | 303 | CG3091-PC | 25..292 | 16..269 | 589 | 39.9 | Plus |
CG3091-PA | 303 | CG3091-PA | 25..292 | 16..269 | 589 | 39.9 | Plus |
CG2663-PC | 308 | CG2663-PC | 34..308 | 20..295 | 384 | 32 | Plus |
CG2663-PA | 308 | CG2663-PA | 34..308 | 20..295 | 384 | 32 | Plus |
CG11550-PA | 298 | CG11550-PA | 26..298 | 22..295 | 340 | 26.7 | Plus |
CG33966-PA | 310 | CG33966-PA | 30..310 | 17..295 | 253 | 23.4 | Plus |
CG12926-PA | 313 | CG12926-PA | 16..313 | 4..295 | 248 | 24.3 | Plus |
CG10657-PA | 334 | CG10657-PA | 46..334 | 9..295 | 238 | 23.9 | Plus |
CG10300-PA | 311 | CG10300-PA | 31..311 | 17..295 | 222 | 24.3 | Plus |
CG33514-PA | 311 | CG33514-PA | 21..311 | 7..295 | 215 | 21.9 | Plus |
CG31636-PB | 313 | CG31636-PB | 26..313 | 13..295 | 213 | 25.9 | Plus |
CG31636-PA | 313 | CG31636-PA | 26..313 | 13..295 | 213 | 25.9 | Plus |
CG33965-PA | 317 | CG33965-PA | 35..317 | 17..295 | 213 | 25.2 | Plus |
CG30339-PA | 308 | CG30339-PA | 33..308 | 20..295 | 212 | 24 | Plus |
pinta-PB | 273 | CG13848-PB | 18..273 | 9..273 | 186 | 22.9 | Plus |
pinta-PA | 273 | CG13848-PA | 18..273 | 9..273 | 186 | 22.9 | Plus |
CG5958-PA | 294 | CG5958-PA | 160..286 | 138..267 | 156 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21476-PA | 305 | GI21476-PA | 1..305 | 1..295 | 1178 | 71.7 | Plus |
Dmoj\GI21454-PA | 288 | GI21454-PA | 4..282 | 5..277 | 716 | 47.3 | Plus |
Dmoj\GI21451-PA | 297 | GI21451-PA | 1..292 | 1..275 | 608 | 37.3 | Plus |
Dmoj\GI23644-PA | 308 | GI23644-PA | 34..308 | 20..295 | 387 | 31.3 | Plus |
Dmoj\GI24455-PA | 298 | GI24455-PA | 15..298 | 11..295 | 337 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26848-PA | 3514 | GL26848-PA | 3249..3514 | 37..295 | 1182 | 81.6 | Plus |
Dper\GL13391-PA | 287 | GL13391-PA | 15..279 | 17..276 | 706 | 49.1 | Plus |
Dper\GL13389-PA | 295 | GL13389-PA | 13..290 | 10..275 | 646 | 41 | Plus |
Dper\GL22169-PA | 308 | GL22169-PA | 34..308 | 20..295 | 381 | 32.6 | Plus |
Dper\GL23532-PA | 298 | GL23532-PA | 15..298 | 11..295 | 358 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17712-PA | 303 | GA17712-PA | 1..303 | 1..295 | 1276 | 78.9 | Plus |
Dpse\GA22853-PA | 287 | GA22853-PA | 15..279 | 17..276 | 704 | 49.1 | Plus |
Dpse\GA22852-PA | 295 | GA22852-PA | 13..290 | 10..275 | 646 | 41 | Plus |
Dpse\GA15415-PA | 308 | GA15415-PA | 34..308 | 20..295 | 381 | 32.6 | Plus |
Dpse\GA11062-PA | 298 | GA11062-PA | 15..298 | 11..295 | 358 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12480-PA | 295 | GM12480-PA | 1..295 | 1..295 | 1568 | 98.6 | Plus |
Dsec\GM18900-PA | 309 | GM18900-PA | 38..302 | 17..277 | 707 | 47.9 | Plus |
Dsec\GM18899-PA | 303 | GM18899-PA | 22..298 | 13..275 | 604 | 38.6 | Plus |
Dsec\GM10638-PA | 308 | GM10638-PA | 34..308 | 20..295 | 391 | 32 | Plus |
Dsec\GM16424-PA | 298 | GM16424-PA | 26..298 | 22..295 | 344 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16379-PA | 303 | GD16379-PA | 23..298 | 14..275 | 611 | 39.1 | Plus |
Dsim\GD19620-PA | 308 | GD19620-PA | 34..308 | 20..295 | 391 | 32 | Plus |
Dsim\GD16370-PA | 298 | GD16370-PA | 24..298 | 20..295 | 345 | 27.6 | Plus |
Dsim\GD14567-PA | 77 | GD14567-PA | 17..77 | 28..88 | 274 | 88.5 | Plus |
Dsim\GD10061-PA | 308 | GD10061-PA | 33..308 | 20..295 | 231 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16499-PA | 295 | GJ16499-PA | 1..295 | 1..295 | 1220 | 75.4 | Plus |
Dvir\GJ16475-PA | 288 | GJ16475-PA | 4..282 | 5..277 | 727 | 48 | Plus |
Dvir\GJ16473-PA | 282 | GJ16473-PA | 2..277 | 17..275 | 626 | 40.6 | Plus |
Dvir\GJ24720-PA | 307 | GJ24720-PA | 33..307 | 20..295 | 394 | 31.7 | Plus |
Dvir\GJ24121-PA | 298 | GJ24121-PA | 15..298 | 11..295 | 332 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19881-PA | 298 | GK19881-PA | 1..298 | 1..295 | 1266 | 78.6 | Plus |
Dwil\GK16332-PA | 291 | GK16332-PA | 14..286 | 13..280 | 744 | 49.8 | Plus |
Dwil\GK16331-PA | 296 | GK16331-PA | 5..284 | 3..268 | 652 | 40 | Plus |
Dwil\GK22841-PA | 306 | GK22841-PA | 32..306 | 20..295 | 391 | 31.7 | Plus |
Dwil\GK10975-PA | 298 | GK10975-PA | 7..298 | 6..295 | 340 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16743-PA | 295 | GE16743-PA | 1..295 | 1..295 | 1527 | 95.6 | Plus |
Dyak\GE16962-PA | 309 | GE16962-PA | 38..302 | 17..277 | 704 | 47.9 | Plus |
Dyak\GE16961-PA | 306 | GE16961-PA | 26..301 | 14..275 | 613 | 39.5 | Plus |
Dyak\GE25285-PA | 308 | GE25285-PA | 34..308 | 20..295 | 391 | 32 | Plus |
Dyak\GE23308-PA | 298 | GE23308-PA | 26..298 | 22..295 | 335 | 26.7 | Plus |